RNA–Protein interactions for RNA: ENST00000481441.1

RXRB-203, Transcript of retinoid X receptor beta, humanhuman

TSL 2

Gene RXRB, Length 1,330 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-203ENST00000481441 CHD2O14647 1828 aaKnown RBP27.28■■□□□ 1.96
RXRB-203ENST00000481441 SLC52A1Q9NWF4 448 aa27.28■■□□□ 1.96
RXRB-203ENST00000481441 SLAIN2Q9P270 581 aa27.28■■□□□ 1.96
RXRB-203ENST00000481441 CHIC2Q9UKJ5 165 aa27.28■■□□□ 1.96
RXRB-203ENST00000481441 MYO5BQ9ULV0 1848 aa27.25■■□□□ 1.95
RXRB-203ENST00000481441 JCADQ9P266 1359 aa27.25■■□□□ 1.95
RXRB-203ENST00000481441 ZFYVE9O95405 1425 aa27.25■■□□□ 1.95
RXRB-203ENST00000481441 BCANQ96GW7 911 aa27.24■■□□□ 1.95
RXRB-203ENST00000481441 COL16A1Q07092 1604 aaPredicted RBP27.23■■□□□ 1.95
RXRB-203ENST00000481441 PLEKHG1Q9ULL1 1385 aa27.22■■□□□ 1.95
RXRB-203ENST00000481441 RPRD2Q5VT52 1461 aaKnown RBP27.22■■□□□ 1.95
RXRB-203ENST00000481441 ADGRL2O95490 1459 aa27.2■■□□□ 1.94
RXRB-203ENST00000481441 GCC2Q8IWJ2 1684 aa27.2■■□□□ 1.94
RXRB-203ENST00000481441 TMEM131LA2VDJ0 1609 aa27.18■■□□□ 1.94
RXRB-203ENST00000481441 RIMS2Q9UQ26 1411 aa27.17■■□□□ 1.94
RXRB-203ENST00000481441 APLP2Q06481 763 aa27.16■■□□□ 1.94
RXRB-203ENST00000481441 NCOA3Q9Y6Q9 1424 aa27.16■■□□□ 1.94
RXRB-203ENST00000481441 LRP6O75581 1613 aa27.15■■□□□ 1.94
RXRB-203ENST00000481441 PPP1R15AO75807 674 aaPredicted RBP27.14■■□□□ 1.93
RXRB-203ENST00000481441 TBX22Q9Y458 520 aa27.14■■□□□ 1.93
RXRB-203ENST00000481441 HDGFP51858 240 aaKnown RBP27.13■■□□□ 1.93
RXRB-203ENST00000481441 ANKRD50Q9ULJ7 1429 aa27.12■■□□□ 1.93
RXRB-203ENST00000481441 SPATA31A6Q5VVP1 1343 aa27.11■■□□□ 1.93
RXRB-203ENST00000481441 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.1■■□□□ 1.93
RXRB-203ENST00000481441 AHDC1Q5TGY3 1603 aaPredicted RBP27.1■■□□□ 1.93
RXRB-203ENST00000481441 SHPRHQ149N8 1683 aa27.09■■□□□ 1.93
RXRB-203ENST00000481441 ADAMTS13Q76LX8 1427 aa27.09■■□□□ 1.93
RXRB-203ENST00000481441 DIP2AQ14689 1571 aa27.06■■□□□ 1.92
RXRB-203ENST00000481441 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.06■■□□□ 1.92
RXRB-203ENST00000481441 ZNF772Q68DY9 489 aaPredicted RBP27.05■■□□□ 1.92
RXRB-203ENST00000481441 C14orf37Q86TY3 774 aa27.05■■□□□ 1.92
RXRB-203ENST00000481441 CADPS2Q86UW7 1296 aa27.05■■□□□ 1.92
RXRB-203ENST00000481441 C19orf44Q9H6X5 657 aa27.05■■□□□ 1.92
RXRB-203ENST00000481441 UNC13BO14795 1591 aa27.04■■□□□ 1.92
RXRB-203ENST00000481441 PIK3R4Q99570 1358 aa27.04■■□□□ 1.92
RXRB-203ENST00000481441 MEX3CQ5U5Q3 659 aaKnown RBP27.03■■□□□ 1.92
RXRB-203ENST00000481441 UPF1Q92900 1129 aaKnown RBP eCLIP27.03■■□□□ 1.92
RXRB-203ENST00000481441 E9PCH4 1651 aa27.02■■□□□ 1.92
RXRB-203ENST00000481441 ATF3P18847 181 aa27.01■■□□□ 1.91
RXRB-203ENST00000481441 CHGAP10645 457 aaKnown RBP27■■□□□ 1.91
RXRB-203ENST00000481441 FAM50AQ14320 339 aaKnown RBP27■■□□□ 1.91
RXRB-203ENST00000481441 NUTM2DQ5VT03 806 aaPredicted RBP27■■□□□ 1.91
RXRB-203ENST00000481441 TRIM52Q96A61 297 aa26.99■■□□□ 1.91
RXRB-203ENST00000481441 TRPM2O94759 1503 aa26.97■■□□□ 1.91
RXRB-203ENST00000481441 PTPRUQ92729 1446 aa26.96■■□□□ 1.91
RXRB-203ENST00000481441 BRINP3Q76B58 766 aa26.95■■□□□ 1.91
RXRB-203ENST00000481441 RXRBP28702 533 aa26.93■■□□□ 1.9
RXRB-203ENST00000481441 AMOTL2Q9Y2J4 779 aa26.93■■□□□ 1.9
RXRB-203ENST00000481441 IQGAP3Q86VI3 1631 aa26.93■■□□□ 1.9
RXRB-203ENST00000481441 CDK12Q9NYV4 1490 aaPredicted RBP26.92■■□□□ 1.9
RXRB-203ENST00000481441 DCCP43146 1447 aa26.91■■□□□ 1.9
RXRB-203ENST00000481441 XRN1Q8IZH2 1706 aaKnown RBP26.9■■□□□ 1.9
RXRB-203ENST00000481441 ASXL1Q8IXJ9 1541 aa26.9■■□□□ 1.9
RXRB-203ENST00000481441 NRXN3Q9Y4C0 1643 aa26.89■■□□□ 1.89
RXRB-203ENST00000481441 NUTM2BA6NNL0 878 aaPredicted RBP26.89■■□□□ 1.89
RXRB-203ENST00000481441 NUTM2EB1AL46 878 aaPredicted RBP26.89■■□□□ 1.89
RXRB-203ENST00000481441 NUTM2AQ8IVF1 878 aaPredicted RBP26.89■■□□□ 1.89
RXRB-203ENST00000481441 SETD5Q9C0A6 1442 aa26.88■■□□□ 1.89
RXRB-203ENST00000481441 NHSL1Q5SYE7 1610 aa26.88■■□□□ 1.89
RXRB-203ENST00000481441 MST1RQ04912 1400 aa26.85■■□□□ 1.89
RXRB-203ENST00000481441 AFF2P51816 1311 aa26.85■■□□□ 1.89
RXRB-203ENST00000481441 SETBP1Q9Y6X0 1596 aa26.84■■□□□ 1.89
RXRB-203ENST00000481441 ROCK1Q13464 1354 aa26.84■■□□□ 1.89
RXRB-203ENST00000481441 NUP155O75694 1391 aa26.8■■□□□ 1.88
RXRB-203ENST00000481441 LRRC59Q96AG4 307 aaKnown RBP26.79■■□□□ 1.88
RXRB-203ENST00000481441 METP08581 1390 aa26.77■■□□□ 1.88
RXRB-203ENST00000481441 RGS12O14924 1447 aa26.77■■□□□ 1.88
RXRB-203ENST00000481441 PNPLA6Q8IY17 1366 aa26.76■■□□□ 1.87
RXRB-203ENST00000481441 SPHKAPQ2M3C7 1700 aa26.76■■□□□ 1.87
RXRB-203ENST00000481441 ADGRL3Q9HAR2 1447 aa26.75■■□□□ 1.87
RXRB-203ENST00000481441 NALCNQ8IZF0 1738 aa26.74■■□□□ 1.87
RXRB-203ENST00000481441 RBM6P78332 1123 aaKnown RBP26.73■■□□□ 1.87
RXRB-203ENST00000481441 DDX17Q92841 729 aaKnown RBP26.73■■□□□ 1.87
RXRB-203ENST00000481441 C8orf37Q96NL8 207 aa26.73■■□□□ 1.87
RXRB-203ENST00000481441 QTRT2Q9H974 415 aaKnown RBP26.73■■□□□ 1.87
RXRB-203ENST00000481441 ZNF326Q5BKZ1 582 aaKnown RBP26.68■■□□□ 1.86
RXRB-203ENST00000481441 LAMC1P11047 1609 aa26.68■■□□□ 1.86
RXRB-203ENST00000481441 NEXMIFQ5QGS0 1516 aa26.67■■□□□ 1.86
RXRB-203ENST00000481441 C1orf167Q5SNV9 1468 aa26.65■■□□□ 1.86
RXRB-203ENST00000481441 CLTCL1P53675 1640 aa26.63■■□□□ 1.85
RXRB-203ENST00000481441 NGLY1Q96IV0 654 aa26.63■■□□□ 1.85
RXRB-203ENST00000481441 ADAMTS2O95450 1211 aa26.62■■□□□ 1.85
RXRB-203ENST00000481441 ITGAEP38570 1179 aa26.61■■□□□ 1.85
RXRB-203ENST00000481441 SOS2Q07890 1332 aaPredicted RBP26.59■■□□□ 1.85
RXRB-203ENST00000481441 PTCH1Q13635 1447 aa26.58■■□□□ 1.85
RXRB-203ENST00000481441 KIF1BO60333 1816 aa26.57■■□□□ 1.84
RXRB-203ENST00000481441 ATAD2Q6PL18 1390 aa26.56■■□□□ 1.84
RXRB-203ENST00000481441 ORAI2Q96SN7 254 aa26.56■■□□□ 1.84
RXRB-203ENST00000481441 ROBO2Q9HCK4 1378 aa26.55■■□□□ 1.84
RXRB-203ENST00000481441 USP21Q9UK80 565 aa26.54■■□□□ 1.84
RXRB-203ENST00000481441 COL22A1Q8NFW1 1626 aaPredicted RBP26.54■■□□□ 1.84
RXRB-203ENST00000481441 FNBP4Q8N3X1 1017 aaPredicted RBP26.53■■□□□ 1.84
RXRB-203ENST00000481441 TRPC5Q9UL62 973 aaPredicted RBP26.53■■□□□ 1.84
RXRB-203ENST00000481441 PRAG1Q86YV5 1406 aa26.53■■□□□ 1.84
RXRB-203ENST00000481441 ATRNO75882 1429 aa26.5■■□□□ 1.83
RXRB-203ENST00000481441 SRCAPQ6ZRS2 3230 aa26.47■■□□□ 1.83
RXRB-203ENST00000481441 VGFO15240 615 aaPredicted RBP26.46■■□□□ 1.83
RXRB-203ENST00000481441 MYOM2P54296 1465 aa26.46■■□□□ 1.83
RXRB-203ENST00000481441 MARF1Q9Y4F3 1742 aaKnown RBP26.44■■□□□ 1.82
RXRB-203ENST00000481441 HFM1A2PYH4 1435 aa26.44■■□□□ 1.82
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms