RNA–Protein interactions for RNA: ENST00000481278.5

TMCO1-206, Transcript of transmembrane and coiled-coil domains 1, humanhuman

TSL 3

Gene TMCO1, Length 752 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO1-206ENST00000481278 PLEKHG1Q9ULL1 1385 aa16.73■□□□□ 0.27
TMCO1-206ENST00000481278 CHD2O14647 1828 aaKnown RBP16.72■□□□□ 0.27
TMCO1-206ENST00000481278 FGD6Q6ZV73 1430 aa16.71■□□□□ 0.27
TMCO1-206ENST00000481278 KANK1Q14678 1352 aa16.71■□□□□ 0.27
TMCO1-206ENST00000481278 NCOA3Q9Y6Q9 1424 aa16.7■□□□□ 0.26
TMCO1-206ENST00000481278 ADGRL2O95490 1459 aa16.7■□□□□ 0.26
TMCO1-206ENST00000481278 STAG3Q9UJ98 1225 aa16.7■□□□□ 0.26
TMCO1-206ENST00000481278 AHDC1Q5TGY3 1603 aaPredicted RBP16.7■□□□□ 0.26
TMCO1-206ENST00000481278 ADAMTS13Q76LX8 1427 aa16.7■□□□□ 0.26
TMCO1-206ENST00000481278 RPRD2Q5VT52 1461 aaKnown RBP16.69■□□□□ 0.26
TMCO1-206ENST00000481278 SLC52A1Q9NWF4 448 aa16.69■□□□□ 0.26
TMCO1-206ENST00000481278 TMEM131LA2VDJ0 1609 aa16.69■□□□□ 0.26
TMCO1-206ENST00000481278 DIP2AQ14689 1571 aa16.68■□□□□ 0.26
TMCO1-206ENST00000481278 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
TMCO1-206ENST00000481278 ANKRD30AQ9BXX3 1397 aa16.67■□□□□ 0.26
TMCO1-206ENST00000481278 RIMS2Q9UQ26 1411 aa16.67■□□□□ 0.26
TMCO1-206ENST00000481278 LOC105371045A0A1W2PR82 267 aa16.66■□□□□ 0.26
TMCO1-206ENST00000481278 SPATA31A6Q5VVP1 1343 aa16.66■□□□□ 0.26
TMCO1-206ENST00000481278 MYO5BQ9ULV0 1848 aa16.66■□□□□ 0.26
TMCO1-206ENST00000481278 SHPRHQ149N8 1683 aa16.65■□□□□ 0.26
TMCO1-206ENST00000481278 TBX22Q9Y458 520 aa16.65■□□□□ 0.26
TMCO1-206ENST00000481278 CHIC2Q9UKJ5 165 aa16.64■□□□□ 0.25
TMCO1-206ENST00000481278 GCC2Q8IWJ2 1684 aa16.64■□□□□ 0.25
TMCO1-206ENST00000481278 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.63■□□□□ 0.25
TMCO1-206ENST00000481278 PTPRUQ92729 1446 aa16.62■□□□□ 0.25
TMCO1-206ENST00000481278 CDK12Q9NYV4 1490 aaPredicted RBP16.61■□□□□ 0.25
TMCO1-206ENST00000481278 PIK3R4Q99570 1358 aa16.6■□□□□ 0.25
TMCO1-206ENST00000481278 ANKRD50Q9ULJ7 1429 aa16.6■□□□□ 0.25
TMCO1-206ENST00000481278 ZNF772Q68DY9 489 aaPredicted RBP16.59■□□□□ 0.25
TMCO1-206ENST00000481278 BRINP3Q76B58 766 aa16.59■□□□□ 0.25
TMCO1-206ENST00000481278 SRCAPQ6ZRS2 3230 aa16.59■□□□□ 0.25
TMCO1-206ENST00000481278 C19orf44Q9H6X5 657 aa16.58■□□□□ 0.24
TMCO1-206ENST00000481278 UNC13BO14795 1591 aa16.57■□□□□ 0.24
TMCO1-206ENST00000481278 CADPS2Q86UW7 1296 aa16.57■□□□□ 0.24
TMCO1-206ENST00000481278 SETD5Q9C0A6 1442 aa16.56■□□□□ 0.24
TMCO1-206ENST00000481278 TRIM52Q96A61 297 aa16.56■□□□□ 0.24
TMCO1-206ENST00000481278 NRXN3Q9Y4C0 1643 aa16.56■□□□□ 0.24
TMCO1-206ENST00000481278 ASXL1Q8IXJ9 1541 aa16.55■□□□□ 0.24
TMCO1-206ENST00000481278 DCCP43146 1447 aa16.55■□□□□ 0.24
TMCO1-206ENST00000481278 BCANQ96GW7 911 aa16.55■□□□□ 0.24
TMCO1-206ENST00000481278 XRN1Q8IZH2 1706 aaKnown RBP16.55■□□□□ 0.24
TMCO1-206ENST00000481278 E9PCH4 1651 aa16.55■□□□□ 0.24
TMCO1-206ENST00000481278 MST1RQ04912 1400 aa16.54■□□□□ 0.24
TMCO1-206ENST00000481278 PPP1R15AO75807 674 aaPredicted RBP16.53■□□□□ 0.24
TMCO1-206ENST00000481278 RXRBP28702 533 aa16.53■□□□□ 0.24
TMCO1-206ENST00000481278 NUTM2DQ5VT03 806 aaPredicted RBP16.53■□□□□ 0.24
TMCO1-206ENST00000481278 TRPM2O94759 1503 aa16.53■□□□□ 0.24
TMCO1-206ENST00000481278 RGS12O14924 1447 aa16.53■□□□□ 0.24
TMCO1-206ENST00000481278 NHSL1Q5SYE7 1610 aa16.52■□□□□ 0.24
TMCO1-206ENST00000481278 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.52■□□□□ 0.24
TMCO1-206ENST00000481278 MEX3CQ5U5Q3 659 aaKnown RBP16.51■□□□□ 0.23
TMCO1-206ENST00000481278 AFF2P51816 1311 aa16.5■□□□□ 0.23
TMCO1-206ENST00000481278 ATF3P18847 181 aa16.5■□□□□ 0.23
TMCO1-206ENST00000481278 HDGFP51858 240 aaKnown RBP16.5■□□□□ 0.23
TMCO1-206ENST00000481278 AMOTL2Q9Y2J4 779 aa16.5■□□□□ 0.23
TMCO1-206ENST00000481278 SETBP1Q9Y6X0 1596 aa16.5■□□□□ 0.23
TMCO1-206ENST00000481278 IQGAP3Q86VI3 1631 aa16.49■□□□□ 0.23
TMCO1-206ENST00000481278 PNPLA6Q8IY17 1366 aa16.48■□□□□ 0.23
TMCO1-206ENST00000481278 C14orf37Q86TY3 774 aa16.47■□□□□ 0.23
TMCO1-206ENST00000481278 METP08581 1390 aa16.47■□□□□ 0.23
TMCO1-206ENST00000481278 NUTM2BA6NNL0 878 aaPredicted RBP16.46■□□□□ 0.23
TMCO1-206ENST00000481278 NUTM2EB1AL46 878 aaPredicted RBP16.46■□□□□ 0.23
TMCO1-206ENST00000481278 NUTM2AQ8IVF1 878 aaPredicted RBP16.46■□□□□ 0.23
TMCO1-206ENST00000481278 LAMC1P11047 1609 aa16.45■□□□□ 0.22
TMCO1-206ENST00000481278 CHGAP10645 457 aaKnown RBP16.44■□□□□ 0.22
TMCO1-206ENST00000481278 DDX17Q92841 729 aaKnown RBP16.44■□□□□ 0.22
TMCO1-206ENST00000481278 ADGRL3Q9HAR2 1447 aa16.44■□□□□ 0.22
TMCO1-206ENST00000481278 ROCK1Q13464 1354 aa16.43■□□□□ 0.22
TMCO1-206ENST00000481278 NALCNQ8IZF0 1738 aa16.42■□□□□ 0.22
TMCO1-206ENST00000481278 RBM6P78332 1123 aaKnown RBP16.41■□□□□ 0.22
TMCO1-206ENST00000481278 FAM50AQ14320 339 aaKnown RBP16.41■□□□□ 0.22
TMCO1-206ENST00000481278 LRRC59Q96AG4 307 aaKnown RBP16.4■□□□□ 0.22
TMCO1-206ENST00000481278 QTRT2Q9H974 415 aaKnown RBP16.4■□□□□ 0.22
TMCO1-206ENST00000481278 APLP2Q06481 763 aa16.39■□□□□ 0.21
TMCO1-206ENST00000481278 C8orf37Q96NL8 207 aa16.39■□□□□ 0.21
TMCO1-206ENST00000481278 C1orf167Q5SNV9 1468 aa16.39■□□□□ 0.21
TMCO1-206ENST00000481278 NEXMIFQ5QGS0 1516 aa16.39■□□□□ 0.21
TMCO1-206ENST00000481278 PRAG1Q86YV5 1406 aa16.37■□□□□ 0.21
TMCO1-206ENST00000481278 EP400Q96L91 3159 aa16.37■□□□□ 0.21
TMCO1-206ENST00000481278 NUP155O75694 1391 aa16.37■□□□□ 0.21
TMCO1-206ENST00000481278 SOS2Q07890 1332 aaPredicted RBP16.36■□□□□ 0.21
TMCO1-206ENST00000481278 ATRNO75882 1429 aa16.35■□□□□ 0.21
TMCO1-206ENST00000481278 PTCH1Q13635 1447 aa16.35■□□□□ 0.21
TMCO1-206ENST00000481278 FNBP4Q8N3X1 1017 aaPredicted RBP16.34■□□□□ 0.21
TMCO1-206ENST00000481278 COL22A1Q8NFW1 1626 aaPredicted RBP16.34■□□□□ 0.21
TMCO1-206ENST00000481278 SPHKAPQ2M3C7 1700 aa16.33■□□□□ 0.21
TMCO1-206ENST00000481278 ROBO2Q9HCK4 1378 aa16.33■□□□□ 0.2
TMCO1-206ENST00000481278 MYOM2P54296 1465 aa16.33■□□□□ 0.2
TMCO1-206ENST00000481278 CLTCL1P53675 1640 aa16.33■□□□□ 0.2
TMCO1-206ENST00000481278 ATAD2Q6PL18 1390 aa16.32■□□□□ 0.2
TMCO1-206ENST00000481278 ADAMTS2O95450 1211 aa16.31■□□□□ 0.2
TMCO1-206ENST00000481278 ORAI2Q96SN7 254 aa16.31■□□□□ 0.2
TMCO1-206ENST00000481278 BCL9LQ86UU0 1499 aa16.3■□□□□ 0.2
TMCO1-206ENST00000481278 NGLY1Q96IV0 654 aa16.29■□□□□ 0.2
TMCO1-206ENST00000481278 PXDNQ92626 1479 aa16.28■□□□□ 0.2
TMCO1-206ENST00000481278 USP21Q9UK80 565 aa16.27■□□□□ 0.2
TMCO1-206ENST00000481278 TRPC5Q9UL62 973 aaPredicted RBP16.27■□□□□ 0.2
TMCO1-206ENST00000481278 ZNF326Q5BKZ1 582 aaKnown RBP16.24■□□□□ 0.19
TMCO1-206ENST00000481278 CDC42BPGQ6DT37 1551 aa16.22■□□□□ 0.19
TMCO1-206ENST00000481278 GLI3P10071 1580 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms