RNA–Protein interactions for RNA: ENST00000481267.5

CD9-205, Transcript of CD9 molecule, humanhuman

TSL 5

Gene CD9, Length 1,280 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-205ENST00000481267 EID1Q9Y6B2 187 aa24.69■■□□□ 1.54
CD9-205ENST00000481267 RIMS2Q9UQ26 1411 aa24.67■■□□□ 1.54
CD9-205ENST00000481267 CCDC144AA2RUR9 1427 aa24.62■■□□□ 1.53
CD9-205ENST00000481267 LTBP4Q8N2S1 1624 aa24.62■■□□□ 1.53
CD9-205ENST00000481267 CERKQ8TCT0 537 aa24.59■■□□□ 1.53
CD9-205ENST00000481267 NEXMIFQ5QGS0 1516 aa24.59■■□□□ 1.53
CD9-205ENST00000481267 ZNF335Q9H4Z2 1342 aaPredicted RBP24.59■■□□□ 1.53
CD9-205ENST00000481267 HDGFP51858 240 aaKnown RBP24.58■■□□□ 1.53
CD9-205ENST00000481267 PLEKHG1Q9ULL1 1385 aa24.57■■□□□ 1.52
CD9-205ENST00000481267 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.57■■□□□ 1.52
CD9-205ENST00000481267 PPP1R15AO75807 674 aaPredicted RBP24.56■■□□□ 1.52
CD9-205ENST00000481267 ZNF326Q5BKZ1 582 aaKnown RBP24.56■■□□□ 1.52
CD9-205ENST00000481267 PPLO60437 1756 aa24.56■■□□□ 1.52
CD9-205ENST00000481267 STRCP1A6NGW2 1772 aa24.55■■□□□ 1.52
CD9-205ENST00000481267 ANKRD30BQ9BXX2 1392 aa24.54■■□□□ 1.52
CD9-205ENST00000481267 NUTM2DQ5VT03 806 aaPredicted RBP24.54■■□□□ 1.52
CD9-205ENST00000481267 SPATA31E1Q6ZUB1 1445 aa24.53■■□□□ 1.52
CD9-205ENST00000481267 IFT172Q9UG01 1749 aa24.52■■□□□ 1.52
CD9-205ENST00000481267 NRXN3Q9Y4C0 1643 aa24.51■■□□□ 1.51
CD9-205ENST00000481267 CPS1P31327 1500 aa24.5■■□□□ 1.51
CD9-205ENST00000481267 DIP2AQ14689 1571 aa24.5■■□□□ 1.51
CD9-205ENST00000481267 SLC26A8Q96RN1 970 aa24.49■■□□□ 1.51
CD9-205ENST00000481267 SETBP1Q9Y6X0 1596 aa24.49■■□□□ 1.51
CD9-205ENST00000481267 BCANQ96GW7 911 aa24.48■■□□□ 1.51
CD9-205ENST00000481267 SENP3Q9H4L4 574 aaPredicted RBP24.48■■□□□ 1.51
CD9-205ENST00000481267 ADAMTS13Q76LX8 1427 aa24.47■■□□□ 1.51
CD9-205ENST00000481267 RPGRIP1LQ68CZ1 1315 aa24.47■■□□□ 1.51
CD9-205ENST00000481267 CHD2O14647 1828 aaKnown RBP24.46■■□□□ 1.51
CD9-205ENST00000481267 NWD1Q149M9 1564 aa24.44■■□□□ 1.5
CD9-205ENST00000481267 IQSEC2Q5JU85 1478 aa24.44■■□□□ 1.5
CD9-205ENST00000481267 RGL3Q3MIN7 710 aa24.43■■□□□ 1.5
CD9-205ENST00000481267 VGFO15240 615 aaPredicted RBP24.41■■□□□ 1.5
CD9-205ENST00000481267 TBX22Q9Y458 520 aa24.41■■□□□ 1.5
CD9-205ENST00000481267 SETD1AO15047 1707 aaKnown RBP24.41■■□□□ 1.5
CD9-205ENST00000481267 XIRP1Q702N8 1843 aaKnown RBP24.39■■□□□ 1.49
CD9-205ENST00000481267 LRRC7Q96NW7 1537 aa24.38■■□□□ 1.49
CD9-205ENST00000481267 DHX57Q6P158 1386 aaKnown RBP24.38■■□□□ 1.49
CD9-205ENST00000481267 KCNA6P17658 529 aa24.36■■□□□ 1.49
CD9-205ENST00000481267 PIK3R4Q99570 1358 aa24.36■■□□□ 1.49
CD9-205ENST00000481267 NKTRP30414 1462 aaKnown RBP24.36■■□□□ 1.49
CD9-205ENST00000481267 ALKQ9UM73 1620 aa24.35■■□□□ 1.49
CD9-205ENST00000481267 MYOM2P54296 1465 aa24.34■■□□□ 1.49
CD9-205ENST00000481267 ADGRF5Q8IZF2 1346 aa24.34■■□□□ 1.49
CD9-205ENST00000481267 XRN1Q8IZH2 1706 aaKnown RBP24.33■■□□□ 1.49
CD9-205ENST00000481267 PCGF6Q9BYE7 350 aa24.32■■□□□ 1.48
CD9-205ENST00000481267 PTPRUQ92729 1446 aa24.31■■□□□ 1.48
CD9-205ENST00000481267 NRXN1Q9ULB1 1477 aa24.31■■□□□ 1.48
CD9-205ENST00000481267 METP08581 1390 aa24.3■■□□□ 1.48
CD9-205ENST00000481267 PIK3C2GO75747 1445 aa24.3■■□□□ 1.48
CD9-205ENST00000481267 LAMC1P11047 1609 aa24.27■■□□□ 1.48
CD9-205ENST00000481267 TMEM94Q12767 1356 aa24.25■■□□□ 1.47
CD9-205ENST00000481267 PROSER2Q86WR7 435 aaPredicted RBP24.24■■□□□ 1.47
CD9-205ENST00000481267 AMOTL2Q9Y2J4 779 aa24.24■■□□□ 1.47
CD9-205ENST00000481267 ASXL1Q8IXJ9 1541 aa24.23■■□□□ 1.47
CD9-205ENST00000481267 DISP3Q9P2K9 1392 aa24.22■■□□□ 1.47
CD9-205ENST00000481267 DCAF11Q8TEB1 546 aa24.22■■□□□ 1.47
CD9-205ENST00000481267 SIN3AQ96ST3 1273 aa24.21■■□□□ 1.47
CD9-205ENST00000481267 RBM33Q96EV2 1170 aaKnown RBP24.2■■□□□ 1.46
CD9-205ENST00000481267 PRAG1Q86YV5 1406 aa24.19■■□□□ 1.46
CD9-205ENST00000481267 UBAP1LF5GYI3 381 aa24.19■■□□□ 1.46
CD9-205ENST00000481267 STAC3Q96MF2 364 aa24.19■■□□□ 1.46
CD9-205ENST00000481267 KDM2AQ9Y2K7 1162 aa24.19■■□□□ 1.46
CD9-205ENST00000481267 KNDC1Q76NI1 1749 aa24.18■■□□□ 1.46
CD9-205ENST00000481267 NCOA3Q9Y6Q9 1424 aa24.18■■□□□ 1.46
CD9-205ENST00000481267 C14orf93Q9H972 538 aaKnown RBP24.17■■□□□ 1.46
CD9-205ENST00000481267 PTCH1Q13635 1447 aa24.17■■□□□ 1.46
CD9-205ENST00000481267 NEUROD1Q13562 356 aa24.15■■□□□ 1.46
CD9-205ENST00000481267 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.15■■□□□ 1.46
CD9-205ENST00000481267 TOM1O60784 492 aa24.14■■□□□ 1.45
CD9-205ENST00000481267 CFAP70Q5T0N1 1121 aa24.14■■□□□ 1.45
CD9-205ENST00000481267 ILDR2Q71H61 639 aa24.14■■□□□ 1.45
CD9-205ENST00000481267 NALCNQ8IZF0 1738 aa24.13■■□□□ 1.45
CD9-205ENST00000481267 MSH6P52701 1360 aa24.13■■□□□ 1.45
CD9-205ENST00000481267 KIAA1210Q9ULL0 1709 aa24.13■■□□□ 1.45
CD9-205ENST00000481267 TECPR2O15040 1411 aa24.12■■□□□ 1.45
CD9-205ENST00000481267 TMEM132EQ6IEE7 984 aa24.12■■□□□ 1.45
CD9-205ENST00000481267 LRPPRCP42704 1394 aaKnown RBP24.12■■□□□ 1.45
CD9-205ENST00000481267 ROBO2Q9HCK4 1378 aa24.12■■□□□ 1.45
CD9-205ENST00000481267 ADGRB1O14514 1584 aa24.12■■□□□ 1.45
CD9-205ENST00000481267 YTHDC2Q9H6S0 1430 aaKnown RBP24.1■■□□□ 1.45
CD9-205ENST00000481267 L3MBTL2Q969R5 705 aa24.1■■□□□ 1.45
CD9-205ENST00000481267 C14orf37Q86TY3 774 aa24.09■■□□□ 1.45
CD9-205ENST00000481267 ABCC11Q96J66 1382 aa24.08■■□□□ 1.45
CD9-205ENST00000481267 STK26Q9P289 416 aa24.07■■□□□ 1.44
CD9-205ENST00000481267 ADGRL3Q9HAR2 1447 aa24.07■■□□□ 1.44
CD9-205ENST00000481267 PIP4K2BP78356 416 aa24.06■■□□□ 1.44
CD9-205ENST00000481267 C19orf44Q9H6X5 657 aa24.05■■□□□ 1.44
CD9-205ENST00000481267 DCCP43146 1447 aa24.04■■□□□ 1.44
CD9-205ENST00000481267 SOCS7O14512 581 aa24.04■■□□□ 1.44
CD9-205ENST00000481267 SCAF1Q9H7N4 1312 aaKnown RBP24.04■■□□□ 1.44
CD9-205ENST00000481267 DLC1Q96QB1 1528 aa24.03■■□□□ 1.44
CD9-205ENST00000481267 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
CD9-205ENST00000481267 ROBO1Q9Y6N7 1651 aa24.02■■□□□ 1.44
CD9-205ENST00000481267 FAM135BQ49AJ0 1406 aa24.01■■□□□ 1.43
CD9-205ENST00000481267 TONSLQ96HA7 1378 aa24.01■■□□□ 1.43
CD9-205ENST00000481267 CADPS2Q86UW7 1296 aa24■■□□□ 1.43
CD9-205ENST00000481267 ARHGEF28Q8N1W1 1705 aaKnown RBP24■■□□□ 1.43
CD9-205ENST00000481267 ATF3P18847 181 aa23.99■■□□□ 1.43
CD9-205ENST00000481267 PLEKHH1Q9ULM0 1364 aa23.99■■□□□ 1.43
CD9-205ENST00000481267 WAPLQ7Z5K2 1190 aa23.98■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms