RNA–Protein interactions for RNA: ENST00000481163.1

PRDM1-206, Transcript of PR/SET domain 1, humanhuman

TSL 3

Gene PRDM1, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM1-206ENST00000481163 TMEM2Q9UHN6 1383 aa9.92□□□□□ -0.82
PRDM1-206ENST00000481163 MPHOSPH9Q99550 1183 aa9.92□□□□□ -0.82
PRDM1-206ENST00000481163 TMEM131LA2VDJ0 1609 aa9.92□□□□□ -0.82
PRDM1-206ENST00000481163 RAB3GAP2Q9H2M9 1393 aa9.91□□□□□ -0.82
PRDM1-206ENST00000481163 KDM5AP29375 1690 aaKnown RBP9.91□□□□□ -0.82
PRDM1-206ENST00000481163 HDGFP51858 240 aaKnown RBP9.91□□□□□ -0.82
PRDM1-206ENST00000481163 RIMS2Q9UQ26 1411 aa9.9□□□□□ -0.82
PRDM1-206ENST00000481163 CLTCL1P53675 1640 aa9.9□□□□□ -0.82
PRDM1-206ENST00000481163 FBXO41Q8TF61 875 aa9.9□□□□□ -0.82
PRDM1-206ENST00000481163 SLIT1O75093 1534 aa9.9□□□□□ -0.82
PRDM1-206ENST00000481163 STRCP1A6NGW2 1772 aa9.9□□□□□ -0.82
PRDM1-206ENST00000481163 LTBP4Q8N2S1 1624 aa9.89□□□□□ -0.83
PRDM1-206ENST00000481163 SCAF1Q9H7N4 1312 aaKnown RBP9.89□□□□□ -0.83
PRDM1-206ENST00000481163 RGL3Q3MIN7 710 aa9.89□□□□□ -0.83
PRDM1-206ENST00000481163 MED14O60244 1454 aa9.89□□□□□ -0.83
PRDM1-206ENST00000481163 ARHGAP23Q9P227 1491 aa9.89□□□□□ -0.83
PRDM1-206ENST00000481163 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.88□□□□□ -0.83
PRDM1-206ENST00000481163 RBM33Q96EV2 1170 aaKnown RBP9.88□□□□□ -0.83
PRDM1-206ENST00000481163 UBAP1LF5GYI3 381 aa9.87□□□□□ -0.83
PRDM1-206ENST00000481163 PIP4K2BP78356 416 aa9.86□□□□□ -0.83
PRDM1-206ENST00000481163 TRPM2O94759 1503 aa9.86□□□□□ -0.83
PRDM1-206ENST00000481163 PROSER2Q86WR7 435 aaPredicted RBP9.85□□□□□ -0.83
PRDM1-206ENST00000481163 ZFYVE9O95405 1425 aa9.84□□□□□ -0.83
PRDM1-206ENST00000481163 CCDC144AA2RUR9 1427 aa9.83□□□□□ -0.84
PRDM1-206ENST00000481163 CPS1P31327 1500 aa9.83□□□□□ -0.84
PRDM1-206ENST00000481163 CHD2O14647 1828 aaKnown RBP9.83□□□□□ -0.84
PRDM1-206ENST00000481163 PLEKHG1Q9ULL1 1385 aa9.83□□□□□ -0.84
PRDM1-206ENST00000481163 ACIN1Q9UKV3 1341 aaKnown RBP9.82□□□□□ -0.84
PRDM1-206ENST00000481163 XIRP1Q702N8 1843 aaKnown RBP9.82□□□□□ -0.84
PRDM1-206ENST00000481163 KCNA6P17658 529 aa9.82□□□□□ -0.84
PRDM1-206ENST00000481163 C14orf37Q86TY3 774 aa9.82□□□□□ -0.84
PRDM1-206ENST00000481163 PPLO60437 1756 aa9.82□□□□□ -0.84
PRDM1-206ENST00000481163 VGFO15240 615 aaPredicted RBP9.81□□□□□ -0.84
PRDM1-206ENST00000481163 TOM1O60784 492 aa9.81□□□□□ -0.84
PRDM1-206ENST00000481163 LRRC7Q96NW7 1537 aa9.81□□□□□ -0.84
PRDM1-206ENST00000481163 TRIM26Q12899 539 aaPredicted RBP9.8□□□□□ -0.84
PRDM1-206ENST00000481163 KDM2AQ9Y2K7 1162 aa9.8□□□□□ -0.84
PRDM1-206ENST00000481163 TBX22Q9Y458 520 aa9.8□□□□□ -0.84
PRDM1-206ENST00000481163 NEXMIFQ5QGS0 1516 aa9.8□□□□□ -0.84
PRDM1-206ENST00000481163 AMOTL2Q9Y2J4 779 aa9.79□□□□□ -0.84
PRDM1-206ENST00000481163 TMEM94Q12767 1356 aa9.78□□□□□ -0.84
PRDM1-206ENST00000481163 HRCP23327 699 aa9.78□□□□□ -0.84
PRDM1-206ENST00000481163 ADAMTS13Q76LX8 1427 aa9.78□□□□□ -0.84
PRDM1-206ENST00000481163 RPGRIP1LQ68CZ1 1315 aa9.78□□□□□ -0.84
PRDM1-206ENST00000481163 IQSEC2Q5JU85 1478 aa9.78□□□□□ -0.84
PRDM1-206ENST00000481163 NRXN3Q9Y4C0 1643 aa9.78□□□□□ -0.84
PRDM1-206ENST00000481163 STK26Q9P289 416 aa9.77□□□□□ -0.85
PRDM1-206ENST00000481163 ADGRF5Q8IZF2 1346 aa9.77□□□□□ -0.85
PRDM1-206ENST00000481163 METP08581 1390 aa9.76□□□□□ -0.85
PRDM1-206ENST00000481163 DCAF11Q8TEB1 546 aa9.76□□□□□ -0.85
PRDM1-206ENST00000481163 IFT172Q9UG01 1749 aa9.76□□□□□ -0.85
PRDM1-206ENST00000481163 ANKRD30BQ9BXX2 1392 aa9.75□□□□□ -0.85
PRDM1-206ENST00000481163 DIP2AQ14689 1571 aa9.75□□□□□ -0.85
PRDM1-206ENST00000481163 PTPRUQ92729 1446 aa9.75□□□□□ -0.85
PRDM1-206ENST00000481163 NEUROD1Q13562 356 aa9.75□□□□□ -0.85
PRDM1-206ENST00000481163 TMEM132EQ6IEE7 984 aa9.75□□□□□ -0.85
PRDM1-206ENST00000481163 SETBP1Q9Y6X0 1596 aa9.75□□□□□ -0.85
PRDM1-206ENST00000481163 ALKQ9UM73 1620 aa9.74□□□□□ -0.85
PRDM1-206ENST00000481163 SPATA31E1Q6ZUB1 1445 aa9.74□□□□□ -0.85
PRDM1-206ENST00000481163 NWD1Q149M9 1564 aa9.74□□□□□ -0.85
PRDM1-206ENST00000481163 MSH6P52701 1360 aa9.74□□□□□ -0.85
PRDM1-206ENST00000481163 HSPA1LP34931 641 aa9.73□□□□□ -0.85
PRDM1-206ENST00000481163 SIN3AQ96ST3 1273 aa9.73□□□□□ -0.85
PRDM1-206ENST00000481163 PCGF6Q9BYE7 350 aa9.73□□□□□ -0.85
PRDM1-206ENST00000481163 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.73□□□□□ -0.85
PRDM1-206ENST00000481163 NKTRP30414 1462 aaKnown RBP9.72□□□□□ -0.85
PRDM1-206ENST00000481163 ATF3P18847 181 aa9.72□□□□□ -0.85
PRDM1-206ENST00000481163 CFAP70Q5T0N1 1121 aa9.72□□□□□ -0.85
PRDM1-206ENST00000481163 SETD1AO15047 1707 aaKnown RBP9.72□□□□□ -0.85
PRDM1-206ENST00000481163 SLAIN2Q9P270 581 aa9.71□□□□□ -0.86
PRDM1-206ENST00000481163 PIK3R4Q99570 1358 aa9.71□□□□□ -0.86
PRDM1-206ENST00000481163 XRN1Q8IZH2 1706 aaKnown RBP9.7□□□□□ -0.86
PRDM1-206ENST00000481163 SAFB2Q14151 953 aaKnown RBP eCLIP9.7□□□□□ -0.86
PRDM1-206ENST00000481163 C19orf44Q9H6X5 657 aa9.7□□□□□ -0.86
PRDM1-206ENST00000481163 NUTM2FA1L443 756 aa9.69□□□□□ -0.86
PRDM1-206ENST00000481163 WAPLQ7Z5K2 1190 aa9.69□□□□□ -0.86
PRDM1-206ENST00000481163 ROBO1Q9Y6N7 1651 aa9.69□□□□□ -0.86
PRDM1-206ENST00000481163 NALCNQ8IZF0 1738 aa9.68□□□□□ -0.86
PRDM1-206ENST00000481163 ROBO2Q9HCK4 1378 aa9.67□□□□□ -0.86
PRDM1-206ENST00000481163 CADPS2Q86UW7 1296 aa9.67□□□□□ -0.86
PRDM1-206ENST00000481163 C14orf93Q9H972 538 aaKnown RBP9.67□□□□□ -0.86
PRDM1-206ENST00000481163 TRAK1Q9UPV9 953 aa9.67□□□□□ -0.86
PRDM1-206ENST00000481163 PIK3C2GO75747 1445 aa9.66□□□□□ -0.86
PRDM1-206ENST00000481163 DHX57Q6P158 1386 aaKnown RBP9.66□□□□□ -0.86
PRDM1-206ENST00000481163 PHLPP1O60346 1717 aa9.66□□□□□ -0.86
PRDM1-206ENST00000481163 POGKQ9P215 609 aa9.66□□□□□ -0.86
PRDM1-206ENST00000481163 DDX17Q92841 729 aaKnown RBP9.65□□□□□ -0.86
PRDM1-206ENST00000481163 L3MBTL2Q969R5 705 aa9.65□□□□□ -0.86
PRDM1-206ENST00000481163 MYOM2P54296 1465 aa9.65□□□□□ -0.87
PRDM1-206ENST00000481163 YTHDC2Q9H6S0 1430 aaKnown RBP9.65□□□□□ -0.87
PRDM1-206ENST00000481163 DISP3Q9P2K9 1392 aa9.64□□□□□ -0.87
PRDM1-206ENST00000481163 PLEKHH1Q9ULM0 1364 aa9.64□□□□□ -0.87
PRDM1-206ENST00000481163 ASXL1Q8IXJ9 1541 aa9.64□□□□□ -0.87
PRDM1-206ENST00000481163 RGPD8O14715 1765 aaPredicted RBP9.64□□□□□ -0.87
PRDM1-206ENST00000481163 NCOA3Q9Y6Q9 1424 aa9.64□□□□□ -0.87
PRDM1-206ENST00000481163 LAMC1P11047 1609 aa9.64□□□□□ -0.87
PRDM1-206ENST00000481163 LRPPRCP42704 1394 aaKnown RBP9.63□□□□□ -0.87
PRDM1-206ENST00000481163 PRAM1Q96QH2 718 aa9.63□□□□□ -0.87
PRDM1-206ENST00000481163 HIRIP3Q9BW71 556 aaPredicted RBP9.63□□□□□ -0.87
PRDM1-206ENST00000481163 FAM135BQ49AJ0 1406 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms