RNA–Protein interactions for RNA: ENST00000481070.1

KCNMA1-220, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 2 BASIC

Gene KCNMA1, Length 896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-220ENST00000481070 TMEM131LA2VDJ0 1609 aa27.78■■■□□ 2.04
KCNMA1-220ENST00000481070 ADGRB3O60242 1522 aa27.77■■■□□ 2.04
KCNMA1-220ENST00000481070 L3MBTL2Q969R5 705 aa27.76■■■□□ 2.03
KCNMA1-220ENST00000481070 CEP170BQ9Y4F5 1589 aaPredicted RBP27.76■■■□□ 2.03
KCNMA1-220ENST00000481070 A2ML1A8K2U0 1454 aa27.76■■■□□ 2.03
KCNMA1-220ENST00000481070 UBR1Q8IWV7 1749 aa27.75■■■□□ 2.03
KCNMA1-220ENST00000481070 NUTM2DQ5VT03 806 aaPredicted RBP27.73■■■□□ 2.03
KCNMA1-220ENST00000481070 KDM2AQ9Y2K7 1162 aa27.73■■■□□ 2.03
KCNMA1-220ENST00000481070 DCAF11Q8TEB1 546 aa27.72■■■□□ 2.03
KCNMA1-220ENST00000481070 SENP3Q9H4L4 574 aaPredicted RBP27.69■■■□□ 2.02
KCNMA1-220ENST00000481070 NCKAP5LQ9HCH0 1330 aa27.68■■■□□ 2.02
KCNMA1-220ENST00000481070 THEMISQ8N1K5 641 aaPredicted RBP27.67■■■□□ 2.02
KCNMA1-220ENST00000481070 NEURL4Q96JN8 1562 aa27.66■■■□□ 2.02
KCNMA1-220ENST00000481070 KDM5AP29375 1690 aaKnown RBP27.65■■■□□ 2.02
KCNMA1-220ENST00000481070 RIMS2Q9UQ26 1411 aa27.65■■■□□ 2.02
KCNMA1-220ENST00000481070 NEXMIFQ5QGS0 1516 aa27.63■■■□□ 2.01
KCNMA1-220ENST00000481070 RPGRIP1LQ68CZ1 1315 aa27.63■■■□□ 2.01
KCNMA1-220ENST00000481070 TMEM2Q9UHN6 1383 aa27.62■■■□□ 2.01
KCNMA1-220ENST00000481070 HSPA1LP34931 641 aa27.62■■■□□ 2.01
KCNMA1-220ENST00000481070 TIMELESSQ9UNS1 1208 aa27.62■■■□□ 2.01
KCNMA1-220ENST00000481070 PPLO60437 1756 aa27.61■■■□□ 2.01
KCNMA1-220ENST00000481070 IFT172Q9UG01 1749 aa27.61■■■□□ 2.01
KCNMA1-220ENST00000481070 PPP1R15AO75807 674 aaPredicted RBP27.6■■■□□ 2.01
KCNMA1-220ENST00000481070 ZEB1P37275 1124 aaPredicted RBP27.58■■■□□ 2.01
KCNMA1-220ENST00000481070 TXNDC2Q86VQ3 553 aa27.58■■■□□ 2.01
KCNMA1-220ENST00000481070 ADGRF5Q8IZF2 1346 aa27.58■■■□□ 2.01
KCNMA1-220ENST00000481070 POLR1AO95602 1720 aaPredicted RBP27.58■■■□□ 2.01
KCNMA1-220ENST00000481070 ZFYVE9O95405 1425 aa27.58■■■□□ 2
KCNMA1-220ENST00000481070 LTKP29376 864 aa27.57■■■□□ 2
KCNMA1-220ENST00000481070 EID1Q9Y6B2 187 aa27.56■■■□□ 2
KCNMA1-220ENST00000481070 CPS1P31327 1500 aa27.56■■■□□ 2
KCNMA1-220ENST00000481070 VGFO15240 615 aaPredicted RBP27.55■■■□□ 2
KCNMA1-220ENST00000481070 HDGFP51858 240 aaKnown RBP27.55■■■□□ 2
KCNMA1-220ENST00000481070 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.55■■■□□ 2
KCNMA1-220ENST00000481070 ARHGAP23Q9P227 1491 aa27.55■■■□□ 2
KCNMA1-220ENST00000481070 SLIT1O75093 1534 aa27.55■■■□□ 2
KCNMA1-220ENST00000481070 NBPF8Q3BBV2 869 aa27.54■■■□□ 2
KCNMA1-220ENST00000481070 SCAF1Q9H7N4 1312 aaKnown RBP27.53■■■□□ 2
KCNMA1-220ENST00000481070 BCANQ96GW7 911 aa27.53■■■□□ 2
KCNMA1-220ENST00000481070 MYOM2P54296 1465 aa27.51■■■□□ 2
KCNMA1-220ENST00000481070 ANKLE2Q86XL3 938 aa27.51■■□□□ 1.99
KCNMA1-220ENST00000481070 TOM1O60784 492 aa27.49■■□□□ 1.99
KCNMA1-220ENST00000481070 PIP4K2BP78356 416 aa27.49■■□□□ 1.99
KCNMA1-220ENST00000481070 PRAG1Q86YV5 1406 aa27.49■■□□□ 1.99
KCNMA1-220ENST00000481070 PHF23Q9BUL5 403 aaPredicted RBP27.48■■□□□ 1.99
KCNMA1-220ENST00000481070 SCAF11Q99590 1463 aaKnown RBP27.48■■□□□ 1.99
KCNMA1-220ENST00000481070 STAC3Q96MF2 364 aa27.47■■□□□ 1.99
KCNMA1-220ENST00000481070 ALKQ9UM73 1620 aa27.45■■□□□ 1.99
KCNMA1-220ENST00000481070 NRXN1Q9ULB1 1477 aa27.44■■□□□ 1.98
KCNMA1-220ENST00000481070 CFAP70Q5T0N1 1121 aa27.44■■□□□ 1.98
KCNMA1-220ENST00000481070 PIK3C2GO75747 1445 aa27.43■■□□□ 1.98
KCNMA1-220ENST00000481070 PLEKHG1Q9ULL1 1385 aa27.42■■□□□ 1.98
KCNMA1-220ENST00000481070 IQGAP1P46940 1657 aa27.4■■□□□ 1.98
KCNMA1-220ENST00000481070 SLC26A8Q96RN1 970 aa27.4■■□□□ 1.98
KCNMA1-220ENST00000481070 NBPF1Q3BBV0 1214 aa27.39■■□□□ 1.98
KCNMA1-220ENST00000481070 NRXN3Q9Y4C0 1643 aa27.38■■□□□ 1.97
KCNMA1-220ENST00000481070 NPHP4O75161 1426 aaPredicted RBP27.37■■□□□ 1.97
KCNMA1-220ENST00000481070 C14orf93Q9H972 538 aaKnown RBP27.37■■□□□ 1.97
KCNMA1-220ENST00000481070 TRPM1Q7Z4N2 1603 aa27.37■■□□□ 1.97
KCNMA1-220ENST00000481070 TMEM132EQ6IEE7 984 aa27.35■■□□□ 1.97
KCNMA1-220ENST00000481070 SETBP1Q9Y6X0 1596 aa27.35■■□□□ 1.97
KCNMA1-220ENST00000481070 ROCK2O75116 1388 aaKnown RBP27.35■■□□□ 1.97
KCNMA1-220ENST00000481070 ADAMTS13Q76LX8 1427 aa27.33■■□□□ 1.97
KCNMA1-220ENST00000481070 RALGAPBQ86X10 1494 aa27.32■■□□□ 1.96
KCNMA1-220ENST00000481070 MED14O60244 1454 aa27.32■■□□□ 1.96
KCNMA1-220ENST00000481070 KIAA1210Q9ULL0 1709 aa27.3■■□□□ 1.96
KCNMA1-220ENST00000481070 CARD11Q9BXL7 1154 aa27.29■■□□□ 1.96
KCNMA1-220ENST00000481070 LAMC1P11047 1609 aa27.29■■□□□ 1.96
KCNMA1-220ENST00000481070 SETD1AO15047 1707 aaKnown RBP27.28■■□□□ 1.96
KCNMA1-220ENST00000481070 METP08581 1390 aa27.28■■□□□ 1.96
KCNMA1-220ENST00000481070 STK26Q9P289 416 aa27.27■■□□□ 1.96
KCNMA1-220ENST00000481070 ASXL1Q8IXJ9 1541 aa27.26■■□□□ 1.96
KCNMA1-220ENST00000481070 TBX22Q9Y458 520 aa27.26■■□□□ 1.95
KCNMA1-220ENST00000481070 STRCP1A6NGW2 1772 aa27.25■■□□□ 1.95
KCNMA1-220ENST00000481070 ADGRB1O14514 1584 aa27.23■■□□□ 1.95
KCNMA1-220ENST00000481070 DIP2AQ14689 1571 aa27.22■■□□□ 1.95
KCNMA1-220ENST00000481070 TRAK1Q9UPV9 953 aa27.22■■□□□ 1.95
KCNMA1-220ENST00000481070 GPRASP1Q5JY77 1395 aa27.21■■□□□ 1.95
KCNMA1-220ENST00000481070 YTHDC2Q9H6S0 1430 aaKnown RBP27.19■■□□□ 1.94
KCNMA1-220ENST00000481070 PTPRUQ92729 1446 aa27.18■■□□□ 1.94
KCNMA1-220ENST00000481070 RGS17Q9UGC6 210 aaPredicted RBP27.18■■□□□ 1.94
KCNMA1-220ENST00000481070 HIRIP3Q9BW71 556 aaPredicted RBP27.17■■□□□ 1.94
KCNMA1-220ENST00000481070 AMOTL2Q9Y2J4 779 aa27.16■■□□□ 1.94
KCNMA1-220ENST00000481070 LRRC7Q96NW7 1537 aa27.16■■□□□ 1.94
KCNMA1-220ENST00000481070 LRPPRCP42704 1394 aaKnown RBP27.15■■□□□ 1.94
KCNMA1-220ENST00000481070 USP47Q96K76 1375 aa27.14■■□□□ 1.94
KCNMA1-220ENST00000481070 HSPA5P11021 654 aaKnown RBP27.12■■□□□ 1.93
KCNMA1-220ENST00000481070 EIF4G2P78344 907 aaKnown RBP eCLIP27.12■■□□□ 1.93
KCNMA1-220ENST00000481070 CHD2O14647 1828 aaKnown RBP27.11■■□□□ 1.93
KCNMA1-220ENST00000481070 PIK3R4Q99570 1358 aa27.1■■□□□ 1.93
KCNMA1-220ENST00000481070 KCNA6P17658 529 aa27.1■■□□□ 1.93
KCNMA1-220ENST00000481070 SAFB2Q14151 953 aaKnown RBP eCLIP27.1■■□□□ 1.93
KCNMA1-220ENST00000481070 ABCC11Q96J66 1382 aa27.09■■□□□ 1.93
KCNMA1-220ENST00000481070 ST20-MTHFSA0A0A6YYL1 179 aa27.08■■□□□ 1.93
KCNMA1-220ENST00000481070 WAPLQ7Z5K2 1190 aa27.08■■□□□ 1.93
KCNMA1-220ENST00000481070 ARHGEF28Q8N1W1 1705 aaKnown RBP27.07■■□□□ 1.92
KCNMA1-220ENST00000481070 PRAM1Q96QH2 718 aa27.07■■□□□ 1.92
KCNMA1-220ENST00000481070 POGKQ9P215 609 aa27.07■■□□□ 1.92
KCNMA1-220ENST00000481070 ROBO2Q9HCK4 1378 aa27.07■■□□□ 1.92
KCNMA1-220ENST00000481070 XIRP1Q702N8 1843 aaKnown RBP27.06■■□□□ 1.92
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms