RNA–Protein interactions for RNA: ENST00000480491.1

RB1-203, Transcript of RB transcriptional corepressor 1, humanhuman

TSL 5

Gene RB1, Length 617 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RB1-203ENST00000480491 TXNDC2Q86VQ3 553 aa17.04■□□□□ 0.32
RB1-203ENST00000480491 PPLO60437 1756 aa17.04■□□□□ 0.32
RB1-203ENST00000480491 LTBP4Q8N2S1 1624 aa17.03■□□□□ 0.32
RB1-203ENST00000480491 NEXMIFQ5QGS0 1516 aa17.03■□□□□ 0.32
RB1-203ENST00000480491 LTKP29376 864 aa17.03■□□□□ 0.32
RB1-203ENST00000480491 HDGFP51858 240 aaKnown RBP17.03■□□□□ 0.32
RB1-203ENST00000480491 TRIM26Q12899 539 aaPredicted RBP17.03■□□□□ 0.32
RB1-203ENST00000480491 IFT172Q9UG01 1749 aa17.03■□□□□ 0.32
RB1-203ENST00000480491 DIP2AQ14689 1571 aa17.02■□□□□ 0.31
RB1-203ENST00000480491 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.01■□□□□ 0.31
RB1-203ENST00000480491 STRCP1A6NGW2 1772 aa17■□□□□ 0.31
RB1-203ENST00000480491 CPS1P31327 1500 aa17■□□□□ 0.31
RB1-203ENST00000480491 PLEKHG1Q9ULL1 1385 aa17■□□□□ 0.31
RB1-203ENST00000480491 PPP1R15AO75807 674 aaPredicted RBP16.99■□□□□ 0.31
RB1-203ENST00000480491 IQSEC2Q5JU85 1478 aa16.98■□□□□ 0.31
RB1-203ENST00000480491 SETBP1Q9Y6X0 1596 aa16.98■□□□□ 0.31
RB1-203ENST00000480491 NRXN3Q9Y4C0 1643 aa16.97■□□□□ 0.31
RB1-203ENST00000480491 ZNF326Q5BKZ1 582 aaKnown RBP16.97■□□□□ 0.31
RB1-203ENST00000480491 ZNF335Q9H4Z2 1342 aaPredicted RBP16.96■□□□□ 0.31
RB1-203ENST00000480491 CHD2O14647 1828 aaKnown RBP16.96■□□□□ 0.31
RB1-203ENST00000480491 NWD1Q149M9 1564 aa16.96■□□□□ 0.31
RB1-203ENST00000480491 SPATA31E1Q6ZUB1 1445 aa16.95■□□□□ 0.3
RB1-203ENST00000480491 ANKRD30BQ9BXX2 1392 aa16.94■□□□□ 0.3
RB1-203ENST00000480491 POTEDQ86YR6 584 aa16.94■□□□□ 0.3
RB1-203ENST00000480491 RPGRIP1LQ68CZ1 1315 aa16.94■□□□□ 0.3
RB1-203ENST00000480491 CERKQ8TCT0 537 aa16.93■□□□□ 0.3
RB1-203ENST00000480491 BCANQ96GW7 911 aa16.92■□□□□ 0.3
RB1-203ENST00000480491 SETD1AO15047 1707 aaKnown RBP16.92■□□□□ 0.3
RB1-203ENST00000480491 XIRP1Q702N8 1843 aaKnown RBP16.91■□□□□ 0.3
RB1-203ENST00000480491 ADAMTS13Q76LX8 1427 aa16.91■□□□□ 0.3
RB1-203ENST00000480491 NUTM2DQ5VT03 806 aaPredicted RBP16.9■□□□□ 0.3
RB1-203ENST00000480491 NKTRP30414 1462 aaKnown RBP16.9■□□□□ 0.3
RB1-203ENST00000480491 SLC26A8Q96RN1 970 aa16.89■□□□□ 0.29
RB1-203ENST00000480491 VGFO15240 615 aaPredicted RBP16.88■□□□□ 0.29
RB1-203ENST00000480491 LAMC1P11047 1609 aa16.88■□□□□ 0.29
RB1-203ENST00000480491 PIK3R4Q99570 1358 aa16.88■□□□□ 0.29
RB1-203ENST00000480491 XRN1Q8IZH2 1706 aaKnown RBP16.87■□□□□ 0.29
RB1-203ENST00000480491 TBX22Q9Y458 520 aa16.87■□□□□ 0.29
RB1-203ENST00000480491 MYOM2P54296 1465 aa16.86■□□□□ 0.29
RB1-203ENST00000480491 LRRC7Q96NW7 1537 aa16.86■□□□□ 0.29
RB1-203ENST00000480491 ALKQ9UM73 1620 aa16.85■□□□□ 0.29
RB1-203ENST00000480491 RGL3Q3MIN7 710 aa16.84■□□□□ 0.29
RB1-203ENST00000480491 KCNA6P17658 529 aa16.83■□□□□ 0.28
RB1-203ENST00000480491 DHX57Q6P158 1386 aaKnown RBP16.82■□□□□ 0.28
RB1-203ENST00000480491 FBXO41Q8TF61 875 aa16.82■□□□□ 0.28
RB1-203ENST00000480491 NRXN1Q9ULB1 1477 aa16.81■□□□□ 0.28
RB1-203ENST00000480491 PIK3C2GO75747 1445 aa16.81■□□□□ 0.28
RB1-203ENST00000480491 KNDC1Q76NI1 1749 aa16.8■□□□□ 0.28
RB1-203ENST00000480491 ADGRF5Q8IZF2 1346 aa16.78■□□□□ 0.28
RB1-203ENST00000480491 PTPRUQ92729 1446 aa16.78■□□□□ 0.28
RB1-203ENST00000480491 METP08581 1390 aa16.77■□□□□ 0.28
RB1-203ENST00000480491 PRAG1Q86YV5 1406 aa16.77■□□□□ 0.27
RB1-203ENST00000480491 KIAA1210Q9ULL0 1709 aa16.76■□□□□ 0.27
RB1-203ENST00000480491 TMEM94Q12767 1356 aa16.76■□□□□ 0.27
RB1-203ENST00000480491 ASXL1Q8IXJ9 1541 aa16.75■□□□□ 0.27
RB1-203ENST00000480491 PROSER2Q86WR7 435 aaPredicted RBP16.75■□□□□ 0.27
RB1-203ENST00000480491 STAC3Q96MF2 364 aa16.75■□□□□ 0.27
RB1-203ENST00000480491 NCOA3Q9Y6Q9 1424 aa16.75■□□□□ 0.27
RB1-203ENST00000480491 NALCNQ8IZF0 1738 aa16.74■□□□□ 0.27
RB1-203ENST00000480491 PTCH1Q13635 1447 aa16.74■□□□□ 0.27
RB1-203ENST00000480491 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.73■□□□□ 0.27
RB1-203ENST00000480491 PCGF6Q9BYE7 350 aa16.73■□□□□ 0.27
RB1-203ENST00000480491 AMOTL2Q9Y2J4 779 aa16.73■□□□□ 0.27
RB1-203ENST00000480491 UBAP1LF5GYI3 381 aa16.72■□□□□ 0.27
RB1-203ENST00000480491 ILDR1Q86SU0 546 aaPredicted RBP16.72■□□□□ 0.27
RB1-203ENST00000480491 DCAF11Q8TEB1 546 aa16.72■□□□□ 0.27
RB1-203ENST00000480491 MSH6P52701 1360 aa16.71■□□□□ 0.27
RB1-203ENST00000480491 TOM1O60784 492 aa16.7■□□□□ 0.26
RB1-203ENST00000480491 TECPR2O15040 1411 aa16.7■□□□□ 0.26
RB1-203ENST00000480491 ADGRB1O14514 1584 aa16.68■□□□□ 0.26
RB1-203ENST00000480491 C14orf93Q9H972 538 aaKnown RBP16.68■□□□□ 0.26
RB1-203ENST00000480491 KDM2AQ9Y2K7 1162 aa16.68■□□□□ 0.26
RB1-203ENST00000480491 LRPPRCP42704 1394 aaKnown RBP16.67■□□□□ 0.26
RB1-203ENST00000480491 DCCP43146 1447 aa16.67■□□□□ 0.26
RB1-203ENST00000480491 YTHDC2Q9H6S0 1430 aaKnown RBP16.67■□□□□ 0.26
RB1-203ENST00000480491 ADGRL3Q9HAR2 1447 aa16.67■□□□□ 0.26
RB1-203ENST00000480491 C14orf37Q86TY3 774 aa16.66■□□□□ 0.26
RB1-203ENST00000480491 SIN3AQ96ST3 1273 aa16.66■□□□□ 0.26
RB1-203ENST00000480491 ARHGEF28Q8N1W1 1705 aaKnown RBP16.65■□□□□ 0.26
RB1-203ENST00000480491 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
RB1-203ENST00000480491 TRPM1Q7Z4N2 1603 aa16.65■□□□□ 0.26
RB1-203ENST00000480491 ROBO1Q9Y6N7 1651 aa16.65■□□□□ 0.26
RB1-203ENST00000480491 DLC1Q96QB1 1528 aa16.65■□□□□ 0.26
RB1-203ENST00000480491 ABCC11Q96J66 1382 aa16.64■□□□□ 0.26
RB1-203ENST00000480491 ROBO2Q9HCK4 1378 aa16.64■□□□□ 0.26
RB1-203ENST00000480491 NEUROD1Q13562 356 aa16.64■□□□□ 0.25
RB1-203ENST00000480491 CFAP70Q5T0N1 1121 aa16.64■□□□□ 0.25
RB1-203ENST00000480491 CDC42BPGQ6DT37 1551 aa16.64■□□□□ 0.25
RB1-203ENST00000480491 FAM135BQ49AJ0 1406 aa16.62■□□□□ 0.25
RB1-203ENST00000480491 TMEM132EQ6IEE7 984 aa16.62■□□□□ 0.25
RB1-203ENST00000480491 C19orf44Q9H6X5 657 aa16.62■□□□□ 0.25
RB1-203ENST00000480491 SCAF1Q9H7N4 1312 aaKnown RBP16.62■□□□□ 0.25
RB1-203ENST00000480491 PIP4K2BP78356 416 aa16.61■□□□□ 0.25
RB1-203ENST00000480491 L3MBTL2Q969R5 705 aa16.61■□□□□ 0.25
RB1-203ENST00000480491 CLSPNQ9HAW4 1339 aa16.61■□□□□ 0.25
RB1-203ENST00000480491 TONSLQ96HA7 1378 aa16.61■□□□□ 0.25
RB1-203ENST00000480491 CADPS2Q86UW7 1296 aa16.6■□□□□ 0.25
RB1-203ENST00000480491 STK26Q9P289 416 aa16.6■□□□□ 0.25
RB1-203ENST00000480491 ATF3P18847 181 aa16.59■□□□□ 0.25
RB1-203ENST00000480491 FMN2Q9NZ56 1722 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms