RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 ANKRD30AQ9BXX3 1397 aa11.02□□□□□ -0.65
COL17A1-205ENST00000480127 JCADQ9P266 1359 aa11.02□□□□□ -0.65
COL17A1-205ENST00000480127 FGD6Q6ZV73 1430 aa11.01□□□□□ -0.65
COL17A1-205ENST00000480127 PHLPP1O60346 1717 aa11.01□□□□□ -0.65
COL17A1-205ENST00000480127 ZFYVE9O95405 1425 aa11.01□□□□□ -0.65
COL17A1-205ENST00000480127 BCANQ96GW7 911 aa11□□□□□ -0.65
COL17A1-205ENST00000480127 SETD1AO15047 1707 aaKnown RBP11□□□□□ -0.65
COL17A1-205ENST00000480127 PLEKHG1Q9ULL1 1385 aa11□□□□□ -0.65
COL17A1-205ENST00000480127 COL16A1Q07092 1604 aaPredicted RBP10.99□□□□□ -0.65
COL17A1-205ENST00000480127 LRP6O75581 1613 aa10.98□□□□□ -0.65
COL17A1-205ENST00000480127 CHD2O14647 1828 aaKnown RBP10.98□□□□□ -0.65
COL17A1-205ENST00000480127 RIMS2Q9UQ26 1411 aa10.98□□□□□ -0.65
COL17A1-205ENST00000480127 ADGRL2O95490 1459 aa10.98□□□□□ -0.65
COL17A1-205ENST00000480127 RPRD2Q5VT52 1461 aaKnown RBP10.98□□□□□ -0.65
COL17A1-205ENST00000480127 TBX22Q9Y458 520 aa10.97□□□□□ -0.65
COL17A1-205ENST00000480127 NCOA3Q9Y6Q9 1424 aa10.97□□□□□ -0.65
COL17A1-205ENST00000480127 TMEM131LA2VDJ0 1609 aa10.96□□□□□ -0.65
COL17A1-205ENST00000480127 SPATA31A6Q5VVP1 1343 aa10.96□□□□□ -0.65
COL17A1-205ENST00000480127 ADAMTS13Q76LX8 1427 aa10.95□□□□□ -0.66
COL17A1-205ENST00000480127 PPP1R15AO75807 674 aaPredicted RBP10.95□□□□□ -0.66
COL17A1-205ENST00000480127 HDGFP51858 240 aaKnown RBP10.95□□□□□ -0.66
COL17A1-205ENST00000480127 UPF1Q92900 1129 aaKnown RBP eCLIP10.95□□□□□ -0.66
COL17A1-205ENST00000480127 MYO5BQ9ULV0 1848 aa10.95□□□□□ -0.66
COL17A1-205ENST00000480127 GCC2Q8IWJ2 1684 aa10.95□□□□□ -0.66
COL17A1-205ENST00000480127 ANKRD50Q9ULJ7 1429 aa10.94□□□□□ -0.66
COL17A1-205ENST00000480127 AHDC1Q5TGY3 1603 aaPredicted RBP10.94□□□□□ -0.66
COL17A1-205ENST00000480127 FAM50AQ14320 339 aaKnown RBP10.93□□□□□ -0.66
COL17A1-205ENST00000480127 ZNF772Q68DY9 489 aaPredicted RBP10.93□□□□□ -0.66
COL17A1-205ENST00000480127 CADPS2Q86UW7 1296 aa10.93□□□□□ -0.66
COL17A1-205ENST00000480127 C19orf44Q9H6X5 657 aa10.93□□□□□ -0.66
COL17A1-205ENST00000480127 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.92□□□□□ -0.66
COL17A1-205ENST00000480127 PIK3R4Q99570 1358 aa10.92□□□□□ -0.66
COL17A1-205ENST00000480127 MEX3CQ5U5Q3 659 aaKnown RBP10.92□□□□□ -0.66
COL17A1-205ENST00000480127 NUTM2DQ5VT03 806 aaPredicted RBP10.92□□□□□ -0.66
COL17A1-205ENST00000480127 C14orf37Q86TY3 774 aa10.92□□□□□ -0.66
COL17A1-205ENST00000480127 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.92□□□□□ -0.66
COL17A1-205ENST00000480127 TRIM52Q96A61 297 aa10.92□□□□□ -0.66
COL17A1-205ENST00000480127 SHPRHQ149N8 1683 aa10.92□□□□□ -0.66
COL17A1-205ENST00000480127 CHGAP10645 457 aaKnown RBP10.91□□□□□ -0.66
COL17A1-205ENST00000480127 ATF3P18847 181 aa10.91□□□□□ -0.66
COL17A1-205ENST00000480127 DIP2AQ14689 1571 aa10.9□□□□□ -0.66
COL17A1-205ENST00000480127 BRINP3Q76B58 766 aa10.9□□□□□ -0.66
COL17A1-205ENST00000480127 AMOTL2Q9Y2J4 779 aa10.9□□□□□ -0.66
COL17A1-205ENST00000480127 PTPRUQ92729 1446 aa10.9□□□□□ -0.66
COL17A1-205ENST00000480127 RXRBP28702 533 aa10.89□□□□□ -0.67
COL17A1-205ENST00000480127 UNC13BO14795 1591 aa10.89□□□□□ -0.67
COL17A1-205ENST00000480127 E9PCH4 1651 aa10.89□□□□□ -0.67
COL17A1-205ENST00000480127 CDK12Q9NYV4 1490 aaPredicted RBP10.88□□□□□ -0.67
COL17A1-205ENST00000480127 NUTM2BA6NNL0 878 aaPredicted RBP10.88□□□□□ -0.67
COL17A1-205ENST00000480127 NUTM2EB1AL46 878 aaPredicted RBP10.88□□□□□ -0.67
COL17A1-205ENST00000480127 NUTM2AQ8IVF1 878 aaPredicted RBP10.88□□□□□ -0.67
COL17A1-205ENST00000480127 TRPM2O94759 1503 aa10.88□□□□□ -0.67
COL17A1-205ENST00000480127 SETD5Q9C0A6 1442 aa10.87□□□□□ -0.67
COL17A1-205ENST00000480127 DCCP43146 1447 aa10.86□□□□□ -0.67
COL17A1-205ENST00000480127 ASXL1Q8IXJ9 1541 aa10.86□□□□□ -0.67
COL17A1-205ENST00000480127 AFF2P51816 1311 aa10.85□□□□□ -0.67
COL17A1-205ENST00000480127 MST1RQ04912 1400 aa10.85□□□□□ -0.67
COL17A1-205ENST00000480127 IQGAP3Q86VI3 1631 aa10.84□□□□□ -0.67
COL17A1-205ENST00000480127 NRXN3Q9Y4C0 1643 aa10.84□□□□□ -0.67
COL17A1-205ENST00000480127 XRN1Q8IZH2 1706 aaKnown RBP10.84□□□□□ -0.67
COL17A1-205ENST00000480127 NHSL1Q5SYE7 1610 aa10.84□□□□□ -0.67
COL17A1-205ENST00000480127 SETBP1Q9Y6X0 1596 aa10.83□□□□□ -0.68
COL17A1-205ENST00000480127 METP08581 1390 aa10.83□□□□□ -0.68
COL17A1-205ENST00000480127 ROCK1Q13464 1354 aa10.83□□□□□ -0.68
COL17A1-205ENST00000480127 ITGAEP38570 1179 aa10.83□□□□□ -0.68
COL17A1-205ENST00000480127 DDX17Q92841 729 aaKnown RBP10.83□□□□□ -0.68
COL17A1-205ENST00000480127 LRRC59Q96AG4 307 aaKnown RBP10.83□□□□□ -0.68
COL17A1-205ENST00000480127 RGS12O14924 1447 aa10.83□□□□□ -0.68
COL17A1-205ENST00000480127 NUP155O75694 1391 aa10.82□□□□□ -0.68
COL17A1-205ENST00000480127 PNPLA6Q8IY17 1366 aa10.82□□□□□ -0.68
COL17A1-205ENST00000480127 C8orf37Q96NL8 207 aa10.82□□□□□ -0.68
COL17A1-205ENST00000480127 QTRT2Q9H974 415 aaKnown RBP10.82□□□□□ -0.68
COL17A1-205ENST00000480127 RBM6P78332 1123 aaKnown RBP10.81□□□□□ -0.68
COL17A1-205ENST00000480127 PPARGC1BQ86YN6 1023 aaKnown RBP10.8□□□□□ -0.68
COL17A1-205ENST00000480127 ADGRL3Q9HAR2 1447 aa10.8□□□□□ -0.68
COL17A1-205ENST00000480127 C1orf167Q5SNV9 1468 aa10.77□□□□□ -0.69
COL17A1-205ENST00000480127 ADAMTS2O95450 1211 aa10.77□□□□□ -0.69
COL17A1-205ENST00000480127 ZNF326Q5BKZ1 582 aaKnown RBP10.77□□□□□ -0.69
COL17A1-205ENST00000480127 NGLY1Q96IV0 654 aa10.77□□□□□ -0.69
COL17A1-205ENST00000480127 NALCNQ8IZF0 1738 aa10.77□□□□□ -0.69
COL17A1-205ENST00000480127 SPHKAPQ2M3C7 1700 aa10.76□□□□□ -0.69
COL17A1-205ENST00000480127 NEXMIFQ5QGS0 1516 aa10.76□□□□□ -0.69
COL17A1-205ENST00000480127 SOS2Q07890 1332 aaPredicted RBP10.76□□□□□ -0.69
COL17A1-205ENST00000480127 LAMC1P11047 1609 aa10.76□□□□□ -0.69
COL17A1-205ENST00000480127 ORAI2Q96SN7 254 aa10.75□□□□□ -0.69
COL17A1-205ENST00000480127 CLTCL1P53675 1640 aa10.74□□□□□ -0.69
COL17A1-205ENST00000480127 USP21Q9UK80 565 aa10.74□□□□□ -0.69
COL17A1-205ENST00000480127 ATAD2Q6PL18 1390 aa10.74□□□□□ -0.69
COL17A1-205ENST00000480127 FNBP4Q8N3X1 1017 aaPredicted RBP10.73□□□□□ -0.69
COL17A1-205ENST00000480127 TRPC5Q9UL62 973 aaPredicted RBP10.73□□□□□ -0.69
COL17A1-205ENST00000480127 ROBO2Q9HCK4 1378 aa10.73□□□□□ -0.69
COL17A1-205ENST00000480127 PTCH1Q13635 1447 aa10.73□□□□□ -0.69
COL17A1-205ENST00000480127 ATRNO75882 1429 aa10.72□□□□□ -0.69
COL17A1-205ENST00000480127 PRAG1Q86YV5 1406 aa10.71□□□□□ -0.69
COL17A1-205ENST00000480127 COL22A1Q8NFW1 1626 aaPredicted RBP10.7□□□□□ -0.7
COL17A1-205ENST00000480127 MYOM2P54296 1465 aa10.69□□□□□ -0.7
COL17A1-205ENST00000480127 BCL9LQ86UU0 1499 aa10.69□□□□□ -0.7
COL17A1-205ENST00000480127 VGFO15240 615 aaPredicted RBP10.69□□□□□ -0.7
COL17A1-205ENST00000480127 ZRANB1Q9UGI0 708 aa10.68□□□□□ -0.7
COL17A1-205ENST00000480127 HFM1A2PYH4 1435 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms