RNA–Protein interactions for RNA: ENST00000480016.1

EFEMP1-211, Transcript of EGF containing fibulin extracellular matrix protein 1, humanhuman

TSL 2

Gene EFEMP1, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFEMP1-211ENST00000480016 SSUH2Q9Y2M2 353 aa13.7□□□□□ -0.22
EFEMP1-211ENST00000480016 AHDC1Q5TGY3 1603 aaPredicted RBP13.69□□□□□ -0.22
EFEMP1-211ENST00000480016 GGT6Q6P531 493 aa13.69□□□□□ -0.22
EFEMP1-211ENST00000480016 USP21Q9UK80 565 aa13.69□□□□□ -0.22
EFEMP1-211ENST00000480016 NINLQ9Y2I6 1382 aa13.68□□□□□ -0.22
EFEMP1-211ENST00000480016 KIDINS220Q9ULH0 1771 aa13.68□□□□□ -0.22
EFEMP1-211ENST00000480016 ATRNO75882 1429 aa13.66□□□□□ -0.22
EFEMP1-211ENST00000480016 MSH6P52701 1360 aa13.66□□□□□ -0.22
EFEMP1-211ENST00000480016 HSPA6P17066 643 aa13.65□□□□□ -0.22
EFEMP1-211ENST00000480016 KCNA6P17658 529 aa13.65□□□□□ -0.22
EFEMP1-211ENST00000480016 ADGBQ8N7X0 1667 aa13.65□□□□□ -0.22
EFEMP1-211ENST00000480016 EEA1Q15075 1411 aa13.64□□□□□ -0.23
EFEMP1-211ENST00000480016 CHD4Q14839 1912 aa13.64□□□□□ -0.23
EFEMP1-211ENST00000480016 KIF14Q15058 1648 aa13.64□□□□□ -0.23
EFEMP1-211ENST00000480016 MIA2Q96PC5 1412 aa13.64□□□□□ -0.23
EFEMP1-211ENST00000480016 LTKP29376 864 aa13.63□□□□□ -0.23
EFEMP1-211ENST00000480016 NLRP1Q9C000 1473 aa13.62□□□□□ -0.23
EFEMP1-211ENST00000480016 BAG6P46379 1132 aa13.62□□□□□ -0.23
EFEMP1-211ENST00000480016 FNBP4Q8N3X1 1017 aaPredicted RBP13.62□□□□□ -0.23
EFEMP1-211ENST00000480016 PPP1R1BQ9UD71 204 aaPredicted RBP13.62□□□□□ -0.23
EFEMP1-211ENST00000480016 ADAMTS2O95450 1211 aa13.61□□□□□ -0.23
EFEMP1-211ENST00000480016 TIAM1Q13009 1591 aa13.61□□□□□ -0.23
EFEMP1-211ENST00000480016 PRDM15P57071 1507 aaPredicted RBP13.59□□□□□ -0.23
EFEMP1-211ENST00000480016 PIP4P2Q8N4L2 257 aa13.59□□□□□ -0.23
EFEMP1-211ENST00000480016 SPDYE1Q8NFV5 336 aaPredicted RBP13.59□□□□□ -0.23
EFEMP1-211ENST00000480016 ABCC3O15438 1527 aa13.59□□□□□ -0.23
EFEMP1-211ENST00000480016 UNC13BO14795 1591 aa13.58□□□□□ -0.23
EFEMP1-211ENST00000480016 EN1Q05925 392 aaPredicted RBP13.58□□□□□ -0.24
EFEMP1-211ENST00000480016 SETD5Q9C0A6 1442 aa13.57□□□□□ -0.24
EFEMP1-211ENST00000480016 FXR2P51116 673 aaKnown RBP eCLIP13.57□□□□□ -0.24
EFEMP1-211ENST00000480016 TXNDC2Q86VQ3 553 aa13.56□□□□□ -0.24
EFEMP1-211ENST00000480016 GJD4Q96KN9 370 aaPredicted RBP13.56□□□□□ -0.24
EFEMP1-211ENST00000480016 MYO5CQ9NQX4 1742 aa13.56□□□□□ -0.24
EFEMP1-211ENST00000480016 ARHGAP23Q9P227 1491 aa13.55□□□□□ -0.24
EFEMP1-211ENST00000480016 DNAJC5GQ8N7S2 189 aa13.55□□□□□ -0.24
EFEMP1-211ENST00000480016 PZPP20742 1482 aa13.55□□□□□ -0.24
EFEMP1-211ENST00000480016 RALGAPBQ86X10 1494 aa13.55□□□□□ -0.24
EFEMP1-211ENST00000480016 LRRC59Q96AG4 307 aaKnown RBP13.54□□□□□ -0.24
EFEMP1-211ENST00000480016 SPON1Q9HCB6 807 aa13.54□□□□□ -0.24
EFEMP1-211ENST00000480016 RANGAP1P46060 587 aaPredicted RBP13.52□□□□□ -0.25
EFEMP1-211ENST00000480016 BRINP3Q76B58 766 aa13.52□□□□□ -0.25
EFEMP1-211ENST00000480016 CLEC11AQ9Y240 323 aa13.52□□□□□ -0.25
EFEMP1-211ENST00000480016 PNPLA6Q8IY17 1366 aa13.52□□□□□ -0.25
EFEMP1-211ENST00000480016 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
EFEMP1-211ENST00000480016 SAMD9Q5K651 1589 aa13.51□□□□□ -0.25
EFEMP1-211ENST00000480016 ARHGAP5Q13017 1502 aa13.51□□□□□ -0.25
EFEMP1-211ENST00000480016 KCNQ2O43526 872 aa13.51□□□□□ -0.25
EFEMP1-211ENST00000480016 BRWD3Q6RI45 1802 aa13.5□□□□□ -0.25
EFEMP1-211ENST00000480016 PLXNC1O60486 1568 aa13.49□□□□□ -0.25
EFEMP1-211ENST00000480016 NCOA2Q15596 1464 aa13.48□□□□□ -0.25
EFEMP1-211ENST00000480016 MAST1Q9Y2H9 1570 aa13.48□□□□□ -0.25
EFEMP1-211ENST00000480016 A2MP01023 1474 aa13.47□□□□□ -0.25
EFEMP1-211ENST00000480016 SPHKAPQ2M3C7 1700 aa13.46□□□□□ -0.25
EFEMP1-211ENST00000480016 NKTRP30414 1462 aaKnown RBP13.46□□□□□ -0.25
EFEMP1-211ENST00000480016 CAMSAP2Q08AD1 1489 aa13.45□□□□□ -0.26
EFEMP1-211ENST00000480016 UBTFP17480 764 aaKnown RBP13.45□□□□□ -0.26
EFEMP1-211ENST00000480016 EZH2Q15910 746 aaKnown RBP13.45□□□□□ -0.26
EFEMP1-211ENST00000480016 WWC3Q9ULE0 1092 aa13.45□□□□□ -0.26
EFEMP1-211ENST00000480016 FAM83GA6ND36 823 aa13.44□□□□□ -0.26
EFEMP1-211ENST00000480016 SLC26A8Q96RN1 970 aa13.44□□□□□ -0.26
EFEMP1-211ENST00000480016 CADPS2Q86UW7 1296 aa13.43□□□□□ -0.26
EFEMP1-211ENST00000480016 SEPT12Q8IYM1 358 aa13.43□□□□□ -0.26
EFEMP1-211ENST00000480016 SHANK3Q9BYB0 1731 aa13.42□□□□□ -0.26
EFEMP1-211ENST00000480016 SPAG9O60271 1321 aaKnown RBP13.41□□□□□ -0.26
EFEMP1-211ENST00000480016 SAMD9LQ8IVG5 1584 aa13.41□□□□□ -0.26
EFEMP1-211ENST00000480016 SLIT1O75093 1534 aa13.41□□□□□ -0.26
EFEMP1-211ENST00000480016 KRT27Q7Z3Y8 459 aa13.4□□□□□ -0.26
EFEMP1-211ENST00000480016 CAMKK2Q96RR4 588 aa13.4□□□□□ -0.26
EFEMP1-211ENST00000480016 EID1Q9Y6B2 187 aa13.4□□□□□ -0.26
EFEMP1-211ENST00000480016 GLI3P10071 1580 aa13.4□□□□□ -0.26
EFEMP1-211ENST00000480016 MROH1Q8NDA8 1641 aa13.39□□□□□ -0.27
EFEMP1-211ENST00000480016 PTCH1Q13635 1447 aa13.39□□□□□ -0.27
EFEMP1-211ENST00000480016 SPDYE4A6NLX3 237 aa13.38□□□□□ -0.27
EFEMP1-211ENST00000480016 C19orf44Q9H6X5 657 aa13.38□□□□□ -0.27
EFEMP1-211ENST00000480016 UBR1Q8IWV7 1749 aa13.38□□□□□ -0.27
EFEMP1-211ENST00000480016 DISP2A7MBM2 1401 aa13.38□□□□□ -0.27
EFEMP1-211ENST00000480016 CDC42BPBQ9Y5S2 1711 aa13.37□□□□□ -0.27
EFEMP1-211ENST00000480016 ATF3P18847 181 aa13.37□□□□□ -0.27
EFEMP1-211ENST00000480016 DDX17Q92841 729 aaKnown RBP13.37□□□□□ -0.27
EFEMP1-211ENST00000480016 SYT17Q9BSW7 474 aa13.37□□□□□ -0.27
EFEMP1-211ENST00000480016 ATP1B4Q9UN42 357 aaPredicted RBP13.37□□□□□ -0.27
EFEMP1-211ENST00000480016 TNS2Q63HR2 1409 aa13.37□□□□□ -0.27
EFEMP1-211ENST00000480016 NCOA3Q9Y6Q9 1424 aa13.37□□□□□ -0.27
EFEMP1-211ENST00000480016 TET3O43151 1660 aa13.37□□□□□ -0.27
EFEMP1-211ENST00000480016 ONECUT3O60422 494 aaPredicted RBP13.36□□□□□ -0.27
EFEMP1-211ENST00000480016 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
EFEMP1-211ENST00000480016 FAM161AQ3B820 660 aa13.36□□□□□ -0.27
EFEMP1-211ENST00000480016 CDK11AQ9UQ88 783 aaPredicted RBP13.36□□□□□ -0.27
EFEMP1-211ENST00000480016 FMN1Q68DA7 1419 aa13.36□□□□□ -0.27
EFEMP1-211ENST00000480016 ARHGAP35Q9NRY4 1499 aa13.36□□□□□ -0.27
EFEMP1-211ENST00000480016 APLP1P51693 650 aa13.35□□□□□ -0.27
EFEMP1-211ENST00000480016 JMYQ8N9B5 988 aa13.35□□□□□ -0.27
EFEMP1-211ENST00000480016 WASHC2CQ9Y4E1 1318 aa13.35□□□□□ -0.27
EFEMP1-211ENST00000480016 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.34□□□□□ -0.27
EFEMP1-211ENST00000480016 PRR29P0C7W0 189 aa13.34□□□□□ -0.27
EFEMP1-211ENST00000480016 ASXL1Q8IXJ9 1541 aa13.34□□□□□ -0.27
EFEMP1-211ENST00000480016 C14orf37Q86TY3 774 aa13.32□□□□□ -0.28
EFEMP1-211ENST00000480016 HAX1O00165 279 aa13.31□□□□□ -0.28
EFEMP1-211ENST00000480016 HNRNPMP52272 730 aaKnown RBP eCLIP13.31□□□□□ -0.28
EFEMP1-211ENST00000480016 FHDC1Q9C0D6 1143 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 7.9 ms