RNA–Protein interactions for RNA: ENST00000479791.1

LYSMD4-206, Transcript of LysM domain containing 4, humanhuman

TSL 5

Gene LYSMD4, Length 3,001 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-206ENST00000479791 ANTXR1Q9H6X2 564 aa16.72■□□□□ 0.27
LYSMD4-206ENST00000479791 NINLQ9Y2I6 1382 aa16.71■□□□□ 0.27
LYSMD4-206ENST00000479791 IGHDP01880 384 aa16.71■□□□□ 0.27
LYSMD4-206ENST00000479791 AMER1Q5JTC6 1135 aaPredicted RBP16.71■□□□□ 0.27
LYSMD4-206ENST00000479791 PDE3AQ14432 1141 aa16.71■□□□□ 0.27
LYSMD4-206ENST00000479791 NLRP1Q9C000 1473 aa16.7■□□□□ 0.26
LYSMD4-206ENST00000479791 ABCC2Q92887 1545 aa16.7■□□□□ 0.26
LYSMD4-206ENST00000479791 IFT140Q96RY7 1462 aa16.7■□□□□ 0.26
LYSMD4-206ENST00000479791 ZMYM3Q14202 1370 aa16.7■□□□□ 0.26
LYSMD4-206ENST00000479791 MYO5CQ9NQX4 1742 aa16.69■□□□□ 0.26
LYSMD4-206ENST00000479791 E9PSI1 815 aa16.69■□□□□ 0.26
LYSMD4-206ENST00000479791 NGEFQ8N5V2 710 aa16.69■□□□□ 0.26
LYSMD4-206ENST00000479791 RNF17Q9BXT8 1623 aaKnown RBP16.69■□□□□ 0.26
LYSMD4-206ENST00000479791 SEC24BO95487 1268 aa16.69■□□□□ 0.26
LYSMD4-206ENST00000479791 NPC1L1Q9UHC9 1359 aa16.68■□□□□ 0.26
LYSMD4-206ENST00000479791 MRC2Q9UBG0 1479 aa16.68■□□□□ 0.26
LYSMD4-206ENST00000479791 BCAR3O75815 825 aa16.68■□□□□ 0.26
LYSMD4-206ENST00000479791 HNRNPMP52272 730 aaKnown RBP eCLIP16.68■□□□□ 0.26
LYSMD4-206ENST00000479791 RSPH4AQ5TD94 716 aa16.68■□□□□ 0.26
LYSMD4-206ENST00000479791 UNC13BO14795 1591 aa16.68■□□□□ 0.26
LYSMD4-206ENST00000479791 CLUAP1Q96AJ1 413 aa16.67■□□□□ 0.26
LYSMD4-206ENST00000479791 SLKQ9H2G2 1235 aaPredicted RBP16.67■□□□□ 0.26
LYSMD4-206ENST00000479791 CARMIL2Q6F5E8 1435 aa16.67■□□□□ 0.26
LYSMD4-206ENST00000479791 SYNMO15061 1565 aa16.67■□□□□ 0.26
LYSMD4-206ENST00000479791 SPINK5Q9NQ38 1064 aaPredicted RBP16.67■□□□□ 0.26
LYSMD4-206ENST00000479791 ATP10AO60312 1499 aa16.66■□□□□ 0.26
LYSMD4-206ENST00000479791 ASXL1Q8IXJ9 1541 aa16.66■□□□□ 0.26
LYSMD4-206ENST00000479791 ABCA8O94911 1581 aa16.66■□□□□ 0.26
LYSMD4-206ENST00000479791 CDCA8Q53HL2 280 aa16.66■□□□□ 0.26
LYSMD4-206ENST00000479791 UPF2Q9HAU5 1272 aaKnown RBP16.65■□□□□ 0.26
LYSMD4-206ENST00000479791 FSD2A1L4K1 749 aa16.65■□□□□ 0.26
LYSMD4-206ENST00000479791 AAMPQ13685 434 aa16.65■□□□□ 0.26
LYSMD4-206ENST00000479791 GLIPR1L2Q4G1C9 344 aa16.64■□□□□ 0.26
LYSMD4-206ENST00000479791 PLXNC1O60486 1568 aa16.64■□□□□ 0.25
LYSMD4-206ENST00000479791 TBC1D32Q96NH3 1257 aa16.64■□□□□ 0.25
LYSMD4-206ENST00000479791 ATP10BO94823 1461 aa16.64■□□□□ 0.25
LYSMD4-206ENST00000479791 GOLGA6L3A6NEY3 463 aa16.63■□□□□ 0.25
LYSMD4-206ENST00000479791 APAF1O14727 1248 aa16.63■□□□□ 0.25
LYSMD4-206ENST00000479791 IQGAP3Q86VI3 1631 aa16.63■□□□□ 0.25
LYSMD4-206ENST00000479791 XRCC6P12956 609 aaKnown RBP eCLIP16.62■□□□□ 0.25
LYSMD4-206ENST00000479791 CLCN1P35523 988 aa16.62■□□□□ 0.25
LYSMD4-206ENST00000479791 CCDC146Q8IYE0 955 aa16.62■□□□□ 0.25
LYSMD4-206ENST00000479791 PMFBP1Q8TBY8 1022 aa16.61■□□□□ 0.25
LYSMD4-206ENST00000479791 TBC1D2Q9BYX2 928 aa16.61■□□□□ 0.25
LYSMD4-206ENST00000479791 SAMD9LQ8IVG5 1584 aa16.61■□□□□ 0.25
LYSMD4-206ENST00000479791 IQGAP1P46940 1657 aa16.61■□□□□ 0.25
LYSMD4-206ENST00000479791 CENPJQ9HC77 1338 aaPredicted RBP16.6■□□□□ 0.25
LYSMD4-206ENST00000479791 MAST1Q9Y2H9 1570 aa16.6■□□□□ 0.25
LYSMD4-206ENST00000479791 PNNQ9H307 717 aaKnown RBP16.59■□□□□ 0.25
LYSMD4-206ENST00000479791 MCM4P33991 863 aa16.59■□□□□ 0.25
LYSMD4-206ENST00000479791 COG6Q9Y2V7 657 aa16.59■□□□□ 0.25
LYSMD4-206ENST00000479791 CANXP27824 592 aaKnown RBP16.57■□□□□ 0.24
LYSMD4-206ENST00000479791 PANK1Q8TE04 598 aa16.57■□□□□ 0.24
LYSMD4-206ENST00000479791 PREX2Q70Z35 1606 aa16.57■□□□□ 0.24
LYSMD4-206ENST00000479791 JPH4Q96JJ6 628 aa16.56■□□□□ 0.24
LYSMD4-206ENST00000479791 SCAPERQ9BY12 1400 aa16.56■□□□□ 0.24
LYSMD4-206ENST00000479791 CDC42BPBQ9Y5S2 1711 aa16.56■□□□□ 0.24
LYSMD4-206ENST00000479791 SCAF11Q99590 1463 aaKnown RBP16.56■□□□□ 0.24
LYSMD4-206ENST00000479791 MADDQ8WXG6 1647 aa16.56■□□□□ 0.24
LYSMD4-206ENST00000479791 MYOM1P52179 1685 aa16.55■□□□□ 0.24
LYSMD4-206ENST00000479791 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.55■□□□□ 0.24
LYSMD4-206ENST00000479791 DMRT2Q9Y5R5 561 aa16.55■□□□□ 0.24
LYSMD4-206ENST00000479791 MRE11P49959 708 aa16.55■□□□□ 0.24
LYSMD4-206ENST00000479791 NAP1L5Q96NT1 182 aaPredicted RBP16.55■□□□□ 0.24
LYSMD4-206ENST00000479791 RRP9O43818 475 aaKnown RBP16.54■□□□□ 0.24
LYSMD4-206ENST00000479791 STAC3Q96MF2 364 aa16.54■□□□□ 0.24
LYSMD4-206ENST00000479791 CHMP5Q9NZZ3 219 aa16.54■□□□□ 0.24
LYSMD4-206ENST00000479791 ISY1Q9ULR0 285 aaKnown RBP16.54■□□□□ 0.24
LYSMD4-206ENST00000479791 WWC1Q8IX03 1113 aa16.53■□□□□ 0.24
LYSMD4-206ENST00000479791 CHMP7Q8WUX9 453 aaPredicted RBP16.53■□□□□ 0.24
LYSMD4-206ENST00000479791 PANK2Q9BZ23 570 aa16.52■□□□□ 0.24
LYSMD4-206ENST00000479791 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
LYSMD4-206ENST00000479791 HSP90AA1P07900 732 aaKnown RBP16.52■□□□□ 0.23
LYSMD4-206ENST00000479791 PKNOX2Q96KN3 472 aa16.52■□□□□ 0.23
LYSMD4-206ENST00000479791 PDZRN3Q9UPQ7 1066 aa16.52■□□□□ 0.23
LYSMD4-206ENST00000479791 TRAK2O60296 914 aa16.51■□□□□ 0.23
LYSMD4-206ENST00000479791 PCDHB15Q9Y5E8 787 aa16.51■□□□□ 0.23
LYSMD4-206ENST00000479791 RWDD1Q9H446 243 aaPredicted RBP16.51■□□□□ 0.23
LYSMD4-206ENST00000479791 SYCP2Q9BX26 1530 aa16.51■□□□□ 0.23
LYSMD4-206ENST00000479791 RARSP54136 660 aaKnown RBP16.51■□□□□ 0.23
LYSMD4-206ENST00000479791 HSP90AA2PQ14568 343 aaPredicted RBP16.51■□□□□ 0.23
LYSMD4-206ENST00000479791 SLC24A1O60721 1099 aa16.5■□□□□ 0.23
LYSMD4-206ENST00000479791 DUOX2Q9NRD8 1548 aa16.5■□□□□ 0.23
LYSMD4-206ENST00000479791 POLR3AO14802 1390 aaPredicted RBP16.49■□□□□ 0.23
LYSMD4-206ENST00000479791 GZF1Q9H116 711 aaPredicted RBP16.49■□□□□ 0.23
LYSMD4-206ENST00000479791 KDM5AP29375 1690 aaKnown RBP16.49■□□□□ 0.23
LYSMD4-206ENST00000479791 ARXQ96QS3 562 aa16.48■□□□□ 0.23
LYSMD4-206ENST00000479791 DDX11L8A8MPP1 907 aa16.48■□□□□ 0.23
LYSMD4-206ENST00000479791 MYH16Q9H6N6 1097 aa16.48■□□□□ 0.23
LYSMD4-206ENST00000479791 TTC37Q6PGP7 1564 aa16.47■□□□□ 0.23
LYSMD4-206ENST00000479791 SPHKAPQ2M3C7 1700 aa16.47■□□□□ 0.23
LYSMD4-206ENST00000479791 RTEL1-TNFRSF6BF6WH68 1400 aa16.47■□□□□ 0.23
LYSMD4-206ENST00000479791 C22orf23Q9BZE7 217 aa16.47■□□□□ 0.23
LYSMD4-206ENST00000479791 GRPEL1Q9HAV7 217 aa16.47■□□□□ 0.23
LYSMD4-206ENST00000479791 RLBP1P12271 317 aa16.46■□□□□ 0.23
LYSMD4-206ENST00000479791 ESPNB1AK53 854 aa16.45■□□□□ 0.22
LYSMD4-206ENST00000479791 PHF23Q9BUL5 403 aaPredicted RBP16.45■□□□□ 0.22
LYSMD4-206ENST00000479791 WDR63Q8IWG1 891 aa16.44■□□□□ 0.22
LYSMD4-206ENST00000479791 SPRYD3Q8NCJ5 442 aa16.44■□□□□ 0.22
LYSMD4-206ENST00000479791 CEP152O94986 1710 aa16.44■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms