RNA–Protein interactions for RNA: ENST00000479452.5

EXD3-208, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene EXD3, Length 962 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-208ENST00000479452 SENP3Q9H4L4 574 aaPredicted RBP31.69■■■□□ 2.66
EXD3-208ENST00000479452 RIMS2Q9UQ26 1411 aa31.68■■■□□ 2.66
EXD3-208ENST00000479452 SCAF1Q9H7N4 1312 aaKnown RBP31.67■■■□□ 2.66
EXD3-208ENST00000479452 ZNF326Q5BKZ1 582 aaKnown RBP31.65■■■□□ 2.66
EXD3-208ENST00000479452 NUTM2DQ5VT03 806 aaPredicted RBP31.64■■■□□ 2.66
EXD3-208ENST00000479452 PIP4K2BP78356 416 aa31.63■■■□□ 2.65
EXD3-208ENST00000479452 KCNA6P17658 529 aa31.62■■■□□ 2.65
EXD3-208ENST00000479452 PLEKHG1Q9ULL1 1385 aa31.61■■■□□ 2.65
EXD3-208ENST00000479452 TMEM131LA2VDJ0 1609 aa31.6■■■□□ 2.65
EXD3-208ENST00000479452 ZFYVE9O95405 1425 aa31.6■■■□□ 2.65
EXD3-208ENST00000479452 ACIN1Q9UKV3 1341 aaKnown RBP31.58■■■□□ 2.65
EXD3-208ENST00000479452 LRRC7Q96NW7 1537 aa31.57■■■□□ 2.64
EXD3-208ENST00000479452 PROSER2Q86WR7 435 aaPredicted RBP31.56■■■□□ 2.64
EXD3-208ENST00000479452 TBX22Q9Y458 520 aa31.55■■■□□ 2.64
EXD3-208ENST00000479452 ILDR2Q71H61 639 aa31.54■■■□□ 2.64
EXD3-208ENST00000479452 MPHOSPH9Q99550 1183 aa31.5■■■□□ 2.63
EXD3-208ENST00000479452 SOCS7O14512 581 aa31.49■■■□□ 2.63
EXD3-208ENST00000479452 SPHKAPQ2M3C7 1700 aa31.49■■■□□ 2.63
EXD3-208ENST00000479452 SETD5Q9C0A6 1442 aa31.49■■■□□ 2.63
EXD3-208ENST00000479452 FOXD1Q16676 465 aa31.47■■■□□ 2.63
EXD3-208ENST00000479452 TRPM2O94759 1503 aa31.46■■■□□ 2.63
EXD3-208ENST00000479452 MYO5BQ9ULV0 1848 aa31.46■■■□□ 2.63
EXD3-208ENST00000479452 STRCP1A6NGW2 1772 aa31.45■■■□□ 2.63
EXD3-208ENST00000479452 TMEM94Q12767 1356 aa31.45■■■□□ 2.63
EXD3-208ENST00000479452 RBM33Q96EV2 1170 aaKnown RBP31.43■■■□□ 2.62
EXD3-208ENST00000479452 VGFO15240 615 aaPredicted RBP31.39■■■□□ 2.62
EXD3-208ENST00000479452 HSPA1LP34931 641 aa31.39■■■□□ 2.62
EXD3-208ENST00000479452 CLTCL1P53675 1640 aa31.38■■■□□ 2.61
EXD3-208ENST00000479452 C14orf37Q86TY3 774 aa31.38■■■□□ 2.61
EXD3-208ENST00000479452 ADAMTS13Q76LX8 1427 aa31.38■■■□□ 2.61
EXD3-208ENST00000479452 RPGRIP1LQ68CZ1 1315 aa31.37■■■□□ 2.61
EXD3-208ENST00000479452 PIK3R4Q99570 1358 aa31.37■■■□□ 2.61
EXD3-208ENST00000479452 NKTRP30414 1462 aaKnown RBP31.37■■■□□ 2.61
EXD3-208ENST00000479452 AMOTL2Q9Y2J4 779 aa31.35■■■□□ 2.61
EXD3-208ENST00000479452 CCDC144AA2RUR9 1427 aa31.34■■■□□ 2.61
EXD3-208ENST00000479452 MSH6P52701 1360 aa31.33■■■□□ 2.61
EXD3-208ENST00000479452 RAB3GAP2Q9H2M9 1393 aa31.33■■■□□ 2.61
EXD3-208ENST00000479452 DIP2AQ14689 1571 aa31.32■■■□□ 2.6
EXD3-208ENST00000479452 NWD1Q149M9 1564 aa31.3■■■□□ 2.6
EXD3-208ENST00000479452 RGL3Q3MIN7 710 aa31.29■■■□□ 2.6
EXD3-208ENST00000479452 KIF1BO60333 1816 aa31.27■■■□□ 2.6
EXD3-208ENST00000479452 NCOA3Q9Y6Q9 1424 aa31.24■■■□□ 2.59
EXD3-208ENST00000479452 NEXMIFQ5QGS0 1516 aa31.24■■■□□ 2.59
EXD3-208ENST00000479452 ALKQ9UM73 1620 aa31.24■■■□□ 2.59
EXD3-208ENST00000479452 SETBP1Q9Y6X0 1596 aa31.23■■■□□ 2.59
EXD3-208ENST00000479452 HRCP23327 699 aa31.23■■■□□ 2.59
EXD3-208ENST00000479452 CHD2O14647 1828 aaKnown RBP31.22■■■□□ 2.59
EXD3-208ENST00000479452 ATF3P18847 181 aa31.22■■■□□ 2.59
EXD3-208ENST00000479452 C19orf44Q9H6X5 657 aa31.22■■■□□ 2.59
EXD3-208ENST00000479452 SLAIN2Q9P270 581 aa31.22■■■□□ 2.59
EXD3-208ENST00000479452 METP08581 1390 aa31.21■■■□□ 2.59
EXD3-208ENST00000479452 FAM135BQ49AJ0 1406 aa31.19■■■□□ 2.58
EXD3-208ENST00000479452 PTPRUQ92729 1446 aa31.19■■■□□ 2.58
EXD3-208ENST00000479452 CADPS2Q86UW7 1296 aa31.18■■■□□ 2.58
EXD3-208ENST00000479452 XIRP1Q702N8 1843 aaKnown RBP31.17■■■□□ 2.58
EXD3-208ENST00000479452 ANKRD30BQ9BXX2 1392 aa31.14■■■□□ 2.58
EXD3-208ENST00000479452 NRXN3Q9Y4C0 1643 aa31.13■■■□□ 2.57
EXD3-208ENST00000479452 SPATA31E1Q6ZUB1 1445 aa31.11■■■□□ 2.57
EXD3-208ENST00000479452 ADGRF5Q8IZF2 1346 aa31.1■■■□□ 2.57
EXD3-208ENST00000479452 PHF23Q9BUL5 403 aaPredicted RBP31■■■□□ 2.55
EXD3-208ENST00000479452 PPLO60437 1756 aa31■■■□□ 2.55
EXD3-208ENST00000479452 XRN1Q8IZH2 1706 aaKnown RBP30.99■■■□□ 2.55
EXD3-208ENST00000479452 STK26Q9P289 416 aa30.99■■■□□ 2.55
EXD3-208ENST00000479452 ROBO1Q9Y6N7 1651 aa30.98■■■□□ 2.55
EXD3-208ENST00000479452 MED1Q15648 1581 aaPredicted RBP30.97■■■□□ 2.55
EXD3-208ENST00000479452 DCCP43146 1447 aa30.97■■■□□ 2.55
EXD3-208ENST00000479452 ROBO2Q9HCK4 1378 aa30.95■■■□□ 2.55
EXD3-208ENST00000479452 TMEM132EQ6IEE7 984 aa30.95■■■□□ 2.55
EXD3-208ENST00000479452 SIPA1L2Q9P2F8 1722 aaPredicted RBP30.95■■■□□ 2.54
EXD3-208ENST00000479452 PTCH1Q13635 1447 aa30.94■■■□□ 2.54
EXD3-208ENST00000479452 ADGRL3Q9HAR2 1447 aa30.93■■■□□ 2.54
EXD3-208ENST00000479452 KDM2AQ9Y2K7 1162 aa30.92■■■□□ 2.54
EXD3-208ENST00000479452 BRINP3Q76B58 766 aa30.91■■■□□ 2.54
EXD3-208ENST00000479452 C14orf93Q9H972 538 aaKnown RBP30.91■■■□□ 2.54
EXD3-208ENST00000479452 PIK3C2GO75747 1445 aa30.9■■■□□ 2.54
EXD3-208ENST00000479452 DCAF11Q8TEB1 546 aa30.9■■■□□ 2.54
EXD3-208ENST00000479452 CFAP70Q5T0N1 1121 aa30.88■■■□□ 2.53
EXD3-208ENST00000479452 LRPPRCP42704 1394 aaKnown RBP30.88■■■□□ 2.53
EXD3-208ENST00000479452 STAC3Q96MF2 364 aa30.87■■■□□ 2.53
EXD3-208ENST00000479452 MST1RQ04912 1400 aa30.85■■■□□ 2.53
EXD3-208ENST00000479452 DHX57Q6P158 1386 aaKnown RBP30.85■■■□□ 2.53
EXD3-208ENST00000479452 ABCC11Q96J66 1382 aa30.85■■■□□ 2.53
EXD3-208ENST00000479452 JCADQ9P266 1359 aa30.85■■■□□ 2.53
EXD3-208ENST00000479452 PRAG1Q86YV5 1406 aa30.84■■■□□ 2.53
EXD3-208ENST00000479452 WAPLQ7Z5K2 1190 aa30.84■■■□□ 2.53
EXD3-208ENST00000479452 SETD1AO15047 1707 aaKnown RBP30.84■■■□□ 2.53
EXD3-208ENST00000479452 MYOM2P54296 1465 aa30.83■■■□□ 2.53
EXD3-208ENST00000479452 IFT172Q9UG01 1749 aa30.81■■■□□ 2.52
EXD3-208ENST00000479452 YTHDC2Q9H6S0 1430 aaKnown RBP30.81■■■□□ 2.52
EXD3-208ENST00000479452 PHLPP1O60346 1717 aa30.8■■■□□ 2.52
EXD3-208ENST00000479452 SIRT1Q96EB6 747 aa30.79■■■□□ 2.52
EXD3-208ENST00000479452 NRXN1Q9ULB1 1477 aa30.78■■■□□ 2.52
EXD3-208ENST00000479452 C1orf167Q5SNV9 1468 aa30.76■■■□□ 2.52
EXD3-208ENST00000479452 TECPR2O15040 1411 aa30.76■■■□□ 2.51
EXD3-208ENST00000479452 LRRC59Q96AG4 307 aaKnown RBP30.75■■■□□ 2.51
EXD3-208ENST00000479452 ASXL1Q8IXJ9 1541 aa30.74■■■□□ 2.51
EXD3-208ENST00000479452 ORAI2Q96SN7 254 aa30.74■■■□□ 2.51
EXD3-208ENST00000479452 POGKQ9P215 609 aa30.74■■■□□ 2.51
EXD3-208ENST00000479452 NALCNQ8IZF0 1738 aa30.73■■■□□ 2.51
EXD3-208ENST00000479452 ESCO1Q5FWF5 840 aa30.73■■■□□ 2.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms