RNA–Protein interactions for RNA: ENST00000479234.1

SCAF8-206, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 5

Gene SCAF8, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-206ENST00000479234 TBC1D12O60347 775 aa8.99□□□□□ -0.97
SCAF8-206ENST00000479234 KCNH8Q96L42 1107 aa8.99□□□□□ -0.97
SCAF8-206ENST00000479234 GPHNQ9NQX3 736 aaPredicted RBP8.99□□□□□ -0.97
SCAF8-206ENST00000479234 CDK11AQ9UQ88 783 aaPredicted RBP8.99□□□□□ -0.97
SCAF8-206ENST00000479234 PTPN23Q9H3S7 1636 aa8.98□□□□□ -0.97
SCAF8-206ENST00000479234 ZNF608Q9ULD9 1512 aaPredicted RBP8.98□□□□□ -0.97
SCAF8-206ENST00000479234 LRRIQ1Q96JM4 1722 aa8.97□□□□□ -0.97
SCAF8-206ENST00000479234 MAGI3Q5TCQ9 1506 aa8.97□□□□□ -0.97
SCAF8-206ENST00000479234 KCTD12Q96CX2 325 aaKnown RBP8.96□□□□□ -0.98
SCAF8-206ENST00000479234 STAC3Q96MF2 364 aa8.96□□□□□ -0.98
SCAF8-206ENST00000479234 TONSLQ96HA7 1378 aa8.96□□□□□ -0.98
SCAF8-206ENST00000479234 GRIN2AQ12879 1464 aa8.96□□□□□ -0.98
SCAF8-206ENST00000479234 MAGI1Q96QZ7 1491 aaPredicted RBP8.96□□□□□ -0.98
SCAF8-206ENST00000479234 DISP1Q96F81 1524 aa8.95□□□□□ -0.98
SCAF8-206ENST00000479234 DSG2Q14126 1118 aa8.95□□□□□ -0.98
SCAF8-206ENST00000479234 CHMP7Q8WUX9 453 aaPredicted RBP8.95□□□□□ -0.98
SCAF8-206ENST00000479234 ROCK1Q13464 1354 aa8.95□□□□□ -0.98
SCAF8-206ENST00000479234 KCNK17Q96T54 332 aa8.94□□□□□ -0.98
SCAF8-206ENST00000479234 CHGAP10645 457 aaKnown RBP8.93□□□□□ -0.98
SCAF8-206ENST00000479234 HS6ST3Q8IZP7 471 aa8.93□□□□□ -0.98
SCAF8-206ENST00000479234 RRP7BPQ9NSQ0 103 aa8.93□□□□□ -0.98
SCAF8-206ENST00000479234 SYNJ2O15056 1496 aa8.93□□□□□ -0.98
SCAF8-206ENST00000479234 ERCC6Q03468 1493 aa8.93□□□□□ -0.98
SCAF8-206ENST00000479234 KIAA0556O60303 1618 aa8.93□□□□□ -0.98
SCAF8-206ENST00000479234 CDK13Q14004 1512 aaKnown RBP8.92□□□□□ -0.98
SCAF8-206ENST00000479234 CCER2I3L3R5 266 aa8.92□□□□□ -0.98
SCAF8-206ENST00000479234 RGS20O76081 388 aa8.92□□□□□ -0.98
SCAF8-206ENST00000479234 DDX10Q13206 875 aaKnown RBP8.92□□□□□ -0.98
SCAF8-206ENST00000479234 JPH4Q96JJ6 628 aa8.92□□□□□ -0.98
SCAF8-206ENST00000479234 CARMIL2Q6F5E8 1435 aa8.91□□□□□ -0.98
SCAF8-206ENST00000479234 IFFO2Q5TF58 517 aa8.91□□□□□ -0.98
SCAF8-206ENST00000479234 TRIM52Q96A61 297 aa8.91□□□□□ -0.98
SCAF8-206ENST00000479234 MPHOSPH9Q99550 1183 aa8.91□□□□□ -0.98
SCAF8-206ENST00000479234 SLC4A5Q9BY07 1137 aa8.91□□□□□ -0.98
SCAF8-206ENST00000479234 CHIC2Q9UKJ5 165 aa8.91□□□□□ -0.98
SCAF8-206ENST00000479234 VPS9D1Q9Y2B5 631 aa8.91□□□□□ -0.98
SCAF8-206ENST00000479234 NUP153P49790 1475 aaKnown RBP8.9□□□□□ -0.98
SCAF8-206ENST00000479234 NUP160Q12769 1436 aa8.9□□□□□ -0.98
SCAF8-206ENST00000479234 TROQ12816 1431 aaPredicted RBP8.9□□□□□ -0.98
SCAF8-206ENST00000479234 OXER1Q8TDS5 423 aa8.9□□□□□ -0.98
SCAF8-206ENST00000479234 RAPGEF6Q8TEU7 1601 aa8.9□□□□□ -0.99
SCAF8-206ENST00000479234 EIF4G3O43432 1585 aaKnown RBP8.9□□□□□ -0.99
SCAF8-206ENST00000479234 ABCC5O15440 1437 aa8.89□□□□□ -0.99
SCAF8-206ENST00000479234 DAPK1P53355 1430 aa8.89□□□□□ -0.99
SCAF8-206ENST00000479234 GCC2Q8IWJ2 1684 aa8.89□□□□□ -0.99
SCAF8-206ENST00000479234 BCL2L12Q9HB09 334 aa8.89□□□□□ -0.99
SCAF8-206ENST00000479234 ANP32CO43423 234 aa8.88□□□□□ -0.99
SCAF8-206ENST00000479234 PLEKHD1A6NEE1 506 aa8.86□□□□□ -0.99
SCAF8-206ENST00000479234 ARID3CA6NKF2 412 aa8.86□□□□□ -0.99
SCAF8-206ENST00000479234 ZNF454Q8N9F8 522 aa8.86□□□□□ -0.99
SCAF8-206ENST00000479234 BBXQ8WY36 941 aaPredicted RBP8.86□□□□□ -0.99
SCAF8-206ENST00000479234 CFDP1Q9UEE9 299 aaPredicted RBP8.86□□□□□ -0.99
SCAF8-206ENST00000479234 CEP170Q5SW79 1584 aa8.86□□□□□ -0.99
SCAF8-206ENST00000479234 ANKRD30BQ9BXX2 1392 aa8.86□□□□□ -0.99
SCAF8-206ENST00000479234 DENND4BO75064 1496 aaPredicted RBP8.85□□□□□ -0.99
SCAF8-206ENST00000479234 DNMT1P26358 1616 aaKnown RBP8.85□□□□□ -0.99
SCAF8-206ENST00000479234 THSD4Q6ZMP0 1018 aa8.85□□□□□ -0.99
SCAF8-206ENST00000479234 KDM5BQ9UGL1 1544 aa8.85□□□□□ -0.99
SCAF8-206ENST00000479234 GPATCH8Q9UKJ3 1502 aaKnown RBP8.85□□□□□ -0.99
SCAF8-206ENST00000479234 BHMG1C9JSJ3 638 aaPredicted RBP8.84□□□□□ -0.99
SCAF8-206ENST00000479234 FOSBP53539 338 aa8.84□□□□□ -0.99
SCAF8-206ENST00000479234 PTPN5P54829 565 aa8.84□□□□□ -0.99
SCAF8-206ENST00000479234 EIF4G2P78344 907 aaKnown RBP eCLIP8.84□□□□□ -0.99
SCAF8-206ENST00000479234 PRG4Q92954 1404 aaPredicted RBP8.84□□□□□ -0.99
SCAF8-206ENST00000479234 CRISPLD2Q9H0B8 497 aa8.84□□□□□ -0.99
SCAF8-206ENST00000479234 RYDENQ9NUL5 291 aaKnown RBP8.84□□□□□ -0.99
SCAF8-206ENST00000479234 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.84□□□□□ -0.99
SCAF8-206ENST00000479234 ZNF644Q9H582 1327 aaPredicted RBP8.83□□□□□ -1
SCAF8-206ENST00000479234 PTPREP23469 700 aa8.83□□□□□ -1
SCAF8-206ENST00000479234 UPF1Q92900 1129 aaKnown RBP eCLIP8.83□□□□□ -1
SCAF8-206ENST00000479234 L3MBTL2Q969R5 705 aa8.83□□□□□ -1
SCAF8-206ENST00000479234 DNAJC5Q9H3Z4 198 aa8.83□□□□□ -1
SCAF8-206ENST00000479234 ADGRL2O95490 1459 aa8.83□□□□□ -1
SCAF8-206ENST00000479234 PLB1Q6P1J6 1458 aa8.83□□□□□ -1
SCAF8-206ENST00000479234 NCOA1Q15788 1441 aa8.82□□□□□ -1
SCAF8-206ENST00000479234 A0A0G2JS52 829 aa8.82□□□□□ -1
SCAF8-206ENST00000479234 HSPA5P11021 654 aaKnown RBP8.82□□□□□ -1
SCAF8-206ENST00000479234 ZBED2Q9BTP6 218 aa8.82□□□□□ -1
SCAF8-206ENST00000479234 HIRIP3Q9BW71 556 aaPredicted RBP8.82□□□□□ -1
SCAF8-206ENST00000479234 ADCY10Q96PN6 1610 aa8.82□□□□□ -1
SCAF8-206ENST00000479234 KDM6BO15054 1643 aa8.81□□□□□ -1
SCAF8-206ENST00000479234 PPP1R15BQ5SWA1 713 aa8.81□□□□□ -1
SCAF8-206ENST00000479234 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
SCAF8-206ENST00000479234 ANKRD30AQ9BXX3 1397 aa8.81□□□□□ -1
SCAF8-206ENST00000479234 ATP10BO94823 1461 aa8.81□□□□□ -1
SCAF8-206ENST00000479234 CAMSAP2Q08AD1 1489 aa8.81□□□□□ -1
SCAF8-206ENST00000479234 RPRD2Q5VT52 1461 aaKnown RBP8.81□□□□□ -1
SCAF8-206ENST00000479234 ABCA8O94911 1581 aa8.81□□□□□ -1
SCAF8-206ENST00000479234 GOLGA8CPA6NN73 597 aa8.8□□□□□ -1
SCAF8-206ENST00000479234 MRPL50Q8N5N7 158 aaKnown RBP8.8□□□□□ -1
SCAF8-206ENST00000479234 SUPT16HQ9Y5B9 1047 aaKnown RBP8.8□□□□□ -1
SCAF8-206ENST00000479234 ITSN2Q9NZM3 1697 aa8.8□□□□□ -1
SCAF8-206ENST00000479234 WNT2BQ93097 391 aa8.79□□□□□ -1
SCAF8-206ENST00000479234 NBPF3Q9H094 633 aa8.79□□□□□ -1
SCAF8-206ENST00000479234 PTPRGP23470 1445 aa8.79□□□□□ -1
SCAF8-206ENST00000479234 ABCC10Q5T3U5 1492 aa8.78□□□□□ -1
SCAF8-206ENST00000479234 TSPY4P0CV99 314 aa8.78□□□□□ -1
SCAF8-206ENST00000479234 TSPY10P0CW01 314 aa8.78□□□□□ -1
SCAF8-206ENST00000479234 PLCB2Q00722 1185 aa8.78□□□□□ -1
SCAF8-206ENST00000479234 IRX2Q9BZI1 471 aaPredicted RBP8.78□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms