RNA–Protein interactions for RNA: ENST00000479192.1

ZNF3-213, Transcript of zinc finger protein 3, humanhuman

TSL 2

Gene ZNF3, Length 640 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF3-213ENST00000479192 KIF1BO60333 1816 aa17.01■□□□□ 0.31
ZNF3-213ENST00000479192 HSPA1LP34931 641 aa17■□□□□ 0.31
ZNF3-213ENST00000479192 MED1Q15648 1581 aaPredicted RBP16.99■□□□□ 0.31
ZNF3-213ENST00000479192 PHF23Q9BUL5 403 aaPredicted RBP16.99■□□□□ 0.31
ZNF3-213ENST00000479192 ZFYVE9O95405 1425 aa16.98■□□□□ 0.31
ZNF3-213ENST00000479192 NUP155O75694 1391 aa16.98■□□□□ 0.31
ZNF3-213ENST00000479192 RRBP1Q9P2E9 1410 aaKnown RBP16.97■□□□□ 0.31
ZNF3-213ENST00000479192 RIMS2Q9UQ26 1411 aa16.97■□□□□ 0.31
ZNF3-213ENST00000479192 NKTRP30414 1462 aaKnown RBP16.97■□□□□ 0.31
ZNF3-213ENST00000479192 HDGFP51858 240 aaKnown RBP16.96■□□□□ 0.31
ZNF3-213ENST00000479192 BCANQ96GW7 911 aa16.96■□□□□ 0.31
ZNF3-213ENST00000479192 SLC26A8Q96RN1 970 aa16.96■□□□□ 0.31
ZNF3-213ENST00000479192 DIP2AQ14689 1571 aa16.95■□□□□ 0.3
ZNF3-213ENST00000479192 PLEKHG1Q9ULL1 1385 aa16.95■□□□□ 0.3
ZNF3-213ENST00000479192 ILDR2Q71H61 639 aa16.95■□□□□ 0.3
ZNF3-213ENST00000479192 ROBO1Q9Y6N7 1651 aa16.94■□□□□ 0.3
ZNF3-213ENST00000479192 PPP1R15AO75807 674 aaPredicted RBP16.94■□□□□ 0.3
ZNF3-213ENST00000479192 CHGAP10645 457 aaKnown RBP16.94■□□□□ 0.3
ZNF3-213ENST00000479192 KCNA6P17658 529 aa16.94■□□□□ 0.3
ZNF3-213ENST00000479192 TMEM94Q12767 1356 aa16.91■□□□□ 0.3
ZNF3-213ENST00000479192 PROSER2Q86WR7 435 aaPredicted RBP16.91■□□□□ 0.3
ZNF3-213ENST00000479192 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.91■□□□□ 0.3
ZNF3-213ENST00000479192 CLTCL1P53675 1640 aa16.9■□□□□ 0.3
ZNF3-213ENST00000479192 TRPM2O94759 1503 aa16.89■□□□□ 0.29
ZNF3-213ENST00000479192 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
ZNF3-213ENST00000479192 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.88■□□□□ 0.29
ZNF3-213ENST00000479192 NRXN3Q9Y4C0 1643 aa16.88■□□□□ 0.29
ZNF3-213ENST00000479192 NAIPQ13075 1403 aa16.87■□□□□ 0.29
ZNF3-213ENST00000479192 SOCS7O14512 581 aa16.86■□□□□ 0.29
ZNF3-213ENST00000479192 MSH6P52701 1360 aa16.86■□□□□ 0.29
ZNF3-213ENST00000479192 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
ZNF3-213ENST00000479192 TBX22Q9Y458 520 aa16.85■□□□□ 0.29
ZNF3-213ENST00000479192 FAM135BQ49AJ0 1406 aa16.85■□□□□ 0.29
ZNF3-213ENST00000479192 ADAMTS13Q76LX8 1427 aa16.85■□□□□ 0.29
ZNF3-213ENST00000479192 RBM33Q96EV2 1170 aaKnown RBP16.84■□□□□ 0.29
ZNF3-213ENST00000479192 SETBP1Q9Y6X0 1596 aa16.84■□□□□ 0.29
ZNF3-213ENST00000479192 XRN1Q8IZH2 1706 aaKnown RBP16.84■□□□□ 0.29
ZNF3-213ENST00000479192 PPLO60437 1756 aa16.83■□□□□ 0.28
ZNF3-213ENST00000479192 PIK3R4Q99570 1358 aa16.83■□□□□ 0.28
ZNF3-213ENST00000479192 NEXMIFQ5QGS0 1516 aa16.82■□□□□ 0.28
ZNF3-213ENST00000479192 HFM1A2PYH4 1435 aa16.82■□□□□ 0.28
ZNF3-213ENST00000479192 NCOA3Q9Y6Q9 1424 aa16.8■□□□□ 0.28
ZNF3-213ENST00000479192 ZNF326Q5BKZ1 582 aaKnown RBP16.8■□□□□ 0.28
ZNF3-213ENST00000479192 SETD1AO15047 1707 aaKnown RBP16.79■□□□□ 0.28
ZNF3-213ENST00000479192 TRIM52Q96A61 297 aa16.78■□□□□ 0.28
ZNF3-213ENST00000479192 C14orf37Q86TY3 774 aa16.77■□□□□ 0.28
ZNF3-213ENST00000479192 COL16A1Q07092 1604 aaPredicted RBP16.76■□□□□ 0.27
ZNF3-213ENST00000479192 NALCNQ8IZF0 1738 aa16.76■□□□□ 0.27
ZNF3-213ENST00000479192 IFT172Q9UG01 1749 aa16.76■□□□□ 0.27
ZNF3-213ENST00000479192 SLAIN2Q9P270 581 aa16.75■□□□□ 0.27
ZNF3-213ENST00000479192 PTPRUQ92729 1446 aa16.75■□□□□ 0.27
ZNF3-213ENST00000479192 AMOTL2Q9Y2J4 779 aa16.74■□□□□ 0.27
ZNF3-213ENST00000479192 SHPRHQ149N8 1683 aa16.73■□□□□ 0.27
ZNF3-213ENST00000479192 AHDC1Q5TGY3 1603 aaPredicted RBP16.72■□□□□ 0.27
ZNF3-213ENST00000479192 SLC4A1APQ9BWU0 796 aaKnown RBP16.72■□□□□ 0.27
ZNF3-213ENST00000479192 ATF3P18847 181 aa16.71■□□□□ 0.27
ZNF3-213ENST00000479192 CADPS2Q86UW7 1296 aa16.71■□□□□ 0.27
ZNF3-213ENST00000479192 C19orf44Q9H6X5 657 aa16.71■□□□□ 0.27
ZNF3-213ENST00000479192 NHSL1Q5SYE7 1610 aa16.7■□□□□ 0.26
ZNF3-213ENST00000479192 DCCP43146 1447 aa16.7■□□□□ 0.26
ZNF3-213ENST00000479192 METP08581 1390 aa16.68■□□□□ 0.26
ZNF3-213ENST00000479192 JCADQ9P266 1359 aa16.66■□□□□ 0.26
ZNF3-213ENST00000479192 VGFO15240 615 aaPredicted RBP16.66■□□□□ 0.26
ZNF3-213ENST00000479192 RPGRIP1LQ68CZ1 1315 aa16.65■□□□□ 0.26
ZNF3-213ENST00000479192 ADGRL3Q9HAR2 1447 aa16.64■□□□□ 0.25
ZNF3-213ENST00000479192 ASXL1Q8IXJ9 1541 aa16.64■□□□□ 0.25
ZNF3-213ENST00000479192 CCDC144AA2RUR9 1427 aa16.63■□□□□ 0.25
ZNF3-213ENST00000479192 KNDC1Q76NI1 1749 aa16.63■□□□□ 0.25
ZNF3-213ENST00000479192 MST1RQ04912 1400 aa16.62■□□□□ 0.25
ZNF3-213ENST00000479192 PTCH1Q13635 1447 aa16.62■□□□□ 0.25
ZNF3-213ENST00000479192 FOXD1Q16676 465 aa16.61■□□□□ 0.25
ZNF3-213ENST00000479192 RGS17Q9UGC6 210 aaPredicted RBP16.61■□□□□ 0.25
ZNF3-213ENST00000479192 ACIN1Q9UKV3 1341 aaKnown RBP16.6■□□□□ 0.25
ZNF3-213ENST00000479192 LAMC1P11047 1609 aa16.59■□□□□ 0.25
ZNF3-213ENST00000479192 BRINP3Q76B58 766 aa16.59■□□□□ 0.25
ZNF3-213ENST00000479192 MPHOSPH9Q99550 1183 aa16.59■□□□□ 0.25
ZNF3-213ENST00000479192 SPATA31A6Q5VVP1 1343 aa16.58■□□□□ 0.24
ZNF3-213ENST00000479192 PRAG1Q86YV5 1406 aa16.58■□□□□ 0.24
ZNF3-213ENST00000479192 SETD5Q9C0A6 1442 aa16.58■□□□□ 0.24
ZNF3-213ENST00000479192 LRP6O75581 1613 aa16.57■□□□□ 0.24
ZNF3-213ENST00000479192 SPATA31E1Q6ZUB1 1445 aa16.56■□□□□ 0.24
ZNF3-213ENST00000479192 RGPD8O14715 1765 aaPredicted RBP16.56■□□□□ 0.24
ZNF3-213ENST00000479192 ROBO2Q9HCK4 1378 aa16.55■□□□□ 0.24
ZNF3-213ENST00000479192 CDC42BPGQ6DT37 1551 aa16.55■□□□□ 0.24
ZNF3-213ENST00000479192 ANKRD30BQ9BXX2 1392 aa16.54■□□□□ 0.24
ZNF3-213ENST00000479192 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
ZNF3-213ENST00000479192 MARF1Q9Y4F3 1742 aaKnown RBP16.53■□□□□ 0.24
ZNF3-213ENST00000479192 MEX3CQ5U5Q3 659 aaKnown RBP16.53■□□□□ 0.24
ZNF3-213ENST00000479192 POTEAQ6S8J7 498 aa16.53■□□□□ 0.24
ZNF3-213ENST00000479192 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
ZNF3-213ENST00000479192 ADGRF5Q8IZF2 1346 aa16.52■□□□□ 0.24
ZNF3-213ENST00000479192 FMN2Q9NZ56 1722 aa16.52■□□□□ 0.24
ZNF3-213ENST00000479192 PIK3C2GO75747 1445 aa16.5■□□□□ 0.23
ZNF3-213ENST00000479192 RAB3GAP2Q9H2M9 1393 aa16.5■□□□□ 0.23
ZNF3-213ENST00000479192 LRRC59Q96AG4 307 aaKnown RBP16.49■□□□□ 0.23
ZNF3-213ENST00000479192 TECPR2O15040 1411 aa16.48■□□□□ 0.23
ZNF3-213ENST00000479192 KIF1AQ12756 1690 aa16.48■□□□□ 0.23
ZNF3-213ENST00000479192 COL22A1Q8NFW1 1626 aaPredicted RBP16.48■□□□□ 0.23
ZNF3-213ENST00000479192 MYOM2P54296 1465 aa16.48■□□□□ 0.23
ZNF3-213ENST00000479192 NUTM2BA6NNL0 878 aaPredicted RBP16.47■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms