RNA–Protein interactions for RNA: ENST00000478901.1

CDK11A-215, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 5

Gene CDK11A, Length 931 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-215ENST00000478901 RIMS2Q9UQ26 1411 aa25.42■■□□□ 1.66
CDK11A-215ENST00000478901 ANKRD30BQ9BXX2 1392 aa25.41■■□□□ 1.66
CDK11A-215ENST00000478901 IQGAP1P46940 1657 aa25.39■■□□□ 1.66
CDK11A-215ENST00000478901 ZNF326Q5BKZ1 582 aaKnown RBP25.37■■□□□ 1.65
CDK11A-215ENST00000478901 PCGF6Q9BYE7 350 aa25.37■■□□□ 1.65
CDK11A-215ENST00000478901 HDGFP51858 240 aaKnown RBP25.36■■□□□ 1.65
CDK11A-215ENST00000478901 NUTM2DQ5VT03 806 aaPredicted RBP25.35■■□□□ 1.65
CDK11A-215ENST00000478901 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.35■■□□□ 1.65
CDK11A-215ENST00000478901 SPATA31E1Q6ZUB1 1445 aa25.33■■□□□ 1.65
CDK11A-215ENST00000478901 NEXMIFQ5QGS0 1516 aa25.32■■□□□ 1.64
CDK11A-215ENST00000478901 PPP1R15AO75807 674 aaPredicted RBP25.32■■□□□ 1.64
CDK11A-215ENST00000478901 PLEKHG1Q9ULL1 1385 aa25.31■■□□□ 1.64
CDK11A-215ENST00000478901 SENP3Q9H4L4 574 aaPredicted RBP25.29■■□□□ 1.64
CDK11A-215ENST00000478901 DHX57Q6P158 1386 aaKnown RBP25.29■■□□□ 1.64
CDK11A-215ENST00000478901 RGL3Q3MIN7 710 aa25.28■■□□□ 1.64
CDK11A-215ENST00000478901 RPGRIP1LQ68CZ1 1315 aa25.28■■□□□ 1.64
CDK11A-215ENST00000478901 ZNF335Q9H4Z2 1342 aaPredicted RBP25.28■■□□□ 1.64
CDK11A-215ENST00000478901 BCANQ96GW7 911 aa25.26■■□□□ 1.63
CDK11A-215ENST00000478901 SLC26A8Q96RN1 970 aa25.26■■□□□ 1.63
CDK11A-215ENST00000478901 LTBP4Q8N2S1 1624 aa25.25■■□□□ 1.63
CDK11A-215ENST00000478901 PPLO60437 1756 aa25.25■■□□□ 1.63
CDK11A-215ENST00000478901 FBXO41Q8TF61 875 aa25.22■■□□□ 1.63
CDK11A-215ENST00000478901 ADAMTS13Q76LX8 1427 aa25.21■■□□□ 1.63
CDK11A-215ENST00000478901 IFT172Q9UG01 1749 aa25.21■■□□□ 1.63
CDK11A-215ENST00000478901 VGFO15240 615 aaPredicted RBP25.21■■□□□ 1.63
CDK11A-215ENST00000478901 NRXN3Q9Y4C0 1643 aa25.19■■□□□ 1.62
CDK11A-215ENST00000478901 SETBP1Q9Y6X0 1596 aa25.19■■□□□ 1.62
CDK11A-215ENST00000478901 TBX22Q9Y458 520 aa25.19■■□□□ 1.62
CDK11A-215ENST00000478901 STRCP1A6NGW2 1772 aa25.18■■□□□ 1.62
CDK11A-215ENST00000478901 ADGRF5Q8IZF2 1346 aa25.15■■□□□ 1.62
CDK11A-215ENST00000478901 DIP2AQ14689 1571 aa25.15■■□□□ 1.62
CDK11A-215ENST00000478901 CERKQ8TCT0 537 aa25.15■■□□□ 1.62
CDK11A-215ENST00000478901 SIN3AQ96ST3 1273 aa25.14■■□□□ 1.62
CDK11A-215ENST00000478901 CPS1P31327 1500 aa25.12■■□□□ 1.61
CDK11A-215ENST00000478901 KCNA6P17658 529 aa25.11■■□□□ 1.61
CDK11A-215ENST00000478901 CHD2O14647 1828 aaKnown RBP25.11■■□□□ 1.61
CDK11A-215ENST00000478901 NWD1Q149M9 1564 aa25.09■■□□□ 1.61
CDK11A-215ENST00000478901 MYOM2P54296 1465 aa25.09■■□□□ 1.61
CDK11A-215ENST00000478901 ALKQ9UM73 1620 aa25.08■■□□□ 1.61
CDK11A-215ENST00000478901 PIK3R4Q99570 1358 aa25.08■■□□□ 1.61
CDK11A-215ENST00000478901 DCAF11Q8TEB1 546 aa25.08■■□□□ 1.61
CDK11A-215ENST00000478901 SETD1AO15047 1707 aaKnown RBP25.08■■□□□ 1.61
CDK11A-215ENST00000478901 METP08581 1390 aa25.07■■□□□ 1.6
CDK11A-215ENST00000478901 NEUROD1Q13562 356 aa25.07■■□□□ 1.6
CDK11A-215ENST00000478901 NRXN1Q9ULB1 1477 aa25.07■■□□□ 1.6
CDK11A-215ENST00000478901 PIK3C2GO75747 1445 aa25.06■■□□□ 1.6
CDK11A-215ENST00000478901 PTPRUQ92729 1446 aa25.06■■□□□ 1.6
CDK11A-215ENST00000478901 LRRC7Q96NW7 1537 aa25.06■■□□□ 1.6
CDK11A-215ENST00000478901 KDM2AQ9Y2K7 1162 aa25.05■■□□□ 1.6
CDK11A-215ENST00000478901 IQSEC2Q5JU85 1478 aa25.02■■□□□ 1.6
CDK11A-215ENST00000478901 STAC3Q96MF2 364 aa25.02■■□□□ 1.6
CDK11A-215ENST00000478901 AMOTL2Q9Y2J4 779 aa25.02■■□□□ 1.6
CDK11A-215ENST00000478901 NKTRP30414 1462 aaKnown RBP25.02■■□□□ 1.6
CDK11A-215ENST00000478901 XIRP1Q702N8 1843 aaKnown RBP24.99■■□□□ 1.59
CDK11A-215ENST00000478901 PROSER2Q86WR7 435 aaPredicted RBP24.99■■□□□ 1.59
CDK11A-215ENST00000478901 XRN1Q8IZH2 1706 aaKnown RBP24.99■■□□□ 1.59
CDK11A-215ENST00000478901 L3MBTL2Q969R5 705 aa24.99■■□□□ 1.59
CDK11A-215ENST00000478901 C14orf93Q9H972 538 aaKnown RBP24.99■■□□□ 1.59
CDK11A-215ENST00000478901 CFAP70Q5T0N1 1121 aa24.97■■□□□ 1.59
CDK11A-215ENST00000478901 ASXL1Q8IXJ9 1541 aa24.96■■□□□ 1.59
CDK11A-215ENST00000478901 TMEM94Q12767 1356 aa24.96■■□□□ 1.59
CDK11A-215ENST00000478901 RBM33Q96EV2 1170 aaKnown RBP24.96■■□□□ 1.59
CDK11A-215ENST00000478901 TMEM132EQ6IEE7 984 aa24.95■■□□□ 1.58
CDK11A-215ENST00000478901 LAMC1P11047 1609 aa24.94■■□□□ 1.58
CDK11A-215ENST00000478901 CLSPNQ9HAW4 1339 aa24.89■■□□□ 1.58
CDK11A-215ENST00000478901 PRAG1Q86YV5 1406 aa24.89■■□□□ 1.58
CDK11A-215ENST00000478901 LRPPRCP42704 1394 aaKnown RBP24.89■■□□□ 1.57
CDK11A-215ENST00000478901 YTHDC2Q9H6S0 1430 aaKnown RBP24.87■■□□□ 1.57
CDK11A-215ENST00000478901 CCER1Q8TC90 406 aaPredicted RBP24.87■■□□□ 1.57
CDK11A-215ENST00000478901 STK26Q9P289 416 aa24.87■■□□□ 1.57
CDK11A-215ENST00000478901 TONSLQ96HA7 1378 aa24.87■■□□□ 1.57
CDK11A-215ENST00000478901 ROBO2Q9HCK4 1378 aa24.87■■□□□ 1.57
CDK11A-215ENST00000478901 ADGRB1O14514 1584 aa24.87■■□□□ 1.57
CDK11A-215ENST00000478901 PTCH1Q13635 1447 aa24.86■■□□□ 1.57
CDK11A-215ENST00000478901 NCOA3Q9Y6Q9 1424 aa24.86■■□□□ 1.57
CDK11A-215ENST00000478901 ABCC11Q96J66 1382 aa24.86■■□□□ 1.57
CDK11A-215ENST00000478901 TECPR2O15040 1411 aa24.86■■□□□ 1.57
CDK11A-215ENST00000478901 UBAP1LF5GYI3 381 aa24.85■■□□□ 1.57
CDK11A-215ENST00000478901 KNDC1Q76NI1 1749 aa24.83■■□□□ 1.57
CDK11A-215ENST00000478901 KIAA1210Q9ULL0 1709 aa24.83■■□□□ 1.57
CDK11A-215ENST00000478901 MSH6P52701 1360 aa24.81■■□□□ 1.56
CDK11A-215ENST00000478901 TOM1O60784 492 aa24.81■■□□□ 1.56
CDK11A-215ENST00000478901 C14orf37Q86TY3 774 aa24.81■■□□□ 1.56
CDK11A-215ENST00000478901 NBPF1Q3BBV0 1214 aa24.8■■□□□ 1.56
CDK11A-215ENST00000478901 NBPF8Q3BBV2 869 aa24.79■■□□□ 1.56
CDK11A-215ENST00000478901 WAPLQ7Z5K2 1190 aa24.79■■□□□ 1.56
CDK11A-215ENST00000478901 C19orf44Q9H6X5 657 aa24.79■■□□□ 1.56
CDK11A-215ENST00000478901 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.78■■□□□ 1.56
CDK11A-215ENST00000478901 SIRT1Q96EB6 747 aa24.77■■□□□ 1.56
CDK11A-215ENST00000478901 NALCNQ8IZF0 1738 aa24.77■■□□□ 1.56
CDK11A-215ENST00000478901 PLEKHH1Q9ULM0 1364 aa24.77■■□□□ 1.56
CDK11A-215ENST00000478901 TRAK1Q9UPV9 953 aa24.76■■□□□ 1.55
CDK11A-215ENST00000478901 FAM135BQ49AJ0 1406 aa24.76■■□□□ 1.55
CDK11A-215ENST00000478901 ADGRL3Q9HAR2 1447 aa24.76■■□□□ 1.55
CDK11A-215ENST00000478901 TRPM1Q7Z4N2 1603 aa24.75■■□□□ 1.55
CDK11A-215ENST00000478901 DLC1Q96QB1 1528 aa24.75■■□□□ 1.55
CDK11A-215ENST00000478901 PIP4K2BP78356 416 aa24.74■■□□□ 1.55
CDK11A-215ENST00000478901 PRAM1Q96QH2 718 aa24.72■■□□□ 1.55
CDK11A-215ENST00000478901 DCCP43146 1447 aa24.71■■□□□ 1.55
CDK11A-215ENST00000478901 ATF3P18847 181 aa24.71■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 80.5 ms