RNA–Protein interactions for RNA: ENST00000478736.1

PDE1C-208, Transcript of phosphodiesterase 1C, humanhuman

TSL 3

Gene PDE1C, Length 495 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-208ENST00000478736 NBPF3Q9H094 633 aa4.29□□□□□ -1.72
PDE1C-208ENST00000478736 SOWAHBA6NEL2 793 aa4.28□□□□□ -1.72
PDE1C-208ENST00000478736 GOLGA8CPA6NN73 597 aa4.28□□□□□ -1.72
PDE1C-208ENST00000478736 MDM2Q00987 491 aaPredicted RBP4.28□□□□□ -1.72
PDE1C-208ENST00000478736 LAPTM4BQ86VI4 370 aa4.28□□□□□ -1.72
PDE1C-208ENST00000478736 TMEM134Q9H6X4 195 aa4.28□□□□□ -1.72
PDE1C-208ENST00000478736 MINK1Q8N4C8 1332 aaPredicted RBP4.27□□□□□ -1.73
PDE1C-208ENST00000478736 TRIM66O15016 1216 aa4.27□□□□□ -1.73
PDE1C-208ENST00000478736 RNF40O75150 1001 aa4.27□□□□□ -1.73
PDE1C-208ENST00000478736 RBM46Q8TBY0 533 aaKnown RBP4.27□□□□□ -1.73
PDE1C-208ENST00000478736 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.27□□□□□ -1.73
PDE1C-208ENST00000478736 HPS5Q9UPZ3 1129 aa4.27□□□□□ -1.73
PDE1C-208ENST00000478736 OATP04181 439 aa4.26□□□□□ -1.73
PDE1C-208ENST00000478736 DNAJB2P25686 324 aa4.26□□□□□ -1.73
PDE1C-208ENST00000478736 APLP1P51693 650 aa4.26□□□□□ -1.73
PDE1C-208ENST00000478736 ANKK1Q8NFD2 765 aa4.26□□□□□ -1.73
PDE1C-208ENST00000478736 LRCH3Q96II8 777 aa4.26□□□□□ -1.73
PDE1C-208ENST00000478736 TMUB1Q9BVT8 246 aa4.26□□□□□ -1.73
PDE1C-208ENST00000478736 DDX11L8A8MPP1 907 aa4.25□□□□□ -1.73
PDE1C-208ENST00000478736 GPBP1L1Q9HC44 474 aaPredicted RBP4.25□□□□□ -1.73
PDE1C-208ENST00000478736 PPP4CP60510 307 aa4.24□□□□□ -1.73
PDE1C-208ENST00000478736 ZNF516Q92618 1163 aa4.24□□□□□ -1.73
PDE1C-208ENST00000478736 HLA-CQ95604 372 aa4.24□□□□□ -1.73
PDE1C-208ENST00000478736 TSR3Q9UJK0 312 aaKnown RBP4.24□□□□□ -1.73
PDE1C-208ENST00000478736 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.23□□□□□ -1.73
PDE1C-208ENST00000478736 MS4A1P11836 297 aa4.23□□□□□ -1.73
PDE1C-208ENST00000478736 PDE4DQ08499 809 aa4.23□□□□□ -1.73
PDE1C-208ENST00000478736 PUS10Q3MIT2 529 aaKnown RBP4.23□□□□□ -1.73
PDE1C-208ENST00000478736 PARP9Q8IXQ6 854 aa4.23□□□□□ -1.73
PDE1C-208ENST00000478736 AK7Q96M32 723 aa4.23□□□□□ -1.73
PDE1C-208ENST00000478736 DAXXQ9UER7 740 aaPredicted RBP4.23□□□□□ -1.73
PDE1C-208ENST00000478736 LCE2BO14633 110 aa4.22□□□□□ -1.73
PDE1C-208ENST00000478736 NKX2-3Q8TAU0 364 aa4.22□□□□□ -1.73
PDE1C-208ENST00000478736 CFHP08603 1231 aa4.21□□□□□ -1.74
PDE1C-208ENST00000478736 CD46P15529 392 aa4.21□□□□□ -1.74
PDE1C-208ENST00000478736 SSTR3P32745 418 aaPredicted RBP4.21□□□□□ -1.74
PDE1C-208ENST00000478736 COPS2P61201 443 aa4.21□□□□□ -1.74
PDE1C-208ENST00000478736 GUCA2AQ02747 115 aa4.21□□□□□ -1.74
PDE1C-208ENST00000478736 TTLL12Q14166 644 aaPredicted RBP4.21□□□□□ -1.74
PDE1C-208ENST00000478736 AMHR2Q16671 573 aa4.21□□□□□ -1.74
PDE1C-208ENST00000478736 TJAP1Q5JTD0 557 aa4.21□□□□□ -1.74
PDE1C-208ENST00000478736 GIGYF2Q6Y7W6 1299 aaKnown RBP4.21□□□□□ -1.74
PDE1C-208ENST00000478736 RDH13Q8NBN7 331 aa4.21□□□□□ -1.74
PDE1C-208ENST00000478736 FAM217BQ9NTX9 383 aaPredicted RBP4.21□□□□□ -1.74
PDE1C-208ENST00000478736 A0A0G2JS52 829 aa4.2□□□□□ -1.74
PDE1C-208ENST00000478736 GCGRP47871 477 aa4.2□□□□□ -1.74
PDE1C-208ENST00000478736 HDGFP51858 240 aaKnown RBP4.2□□□□□ -1.74
PDE1C-208ENST00000478736 FUT2Q10981 343 aa4.2□□□□□ -1.74
PDE1C-208ENST00000478736 BLOC1S3Q6QNY0 202 aa4.2□□□□□ -1.74
PDE1C-208ENST00000478736 SLF2Q8IX21 1173 aa4.2□□□□□ -1.74
PDE1C-208ENST00000478736 MTRQ99707 1265 aa4.2□□□□□ -1.74
PDE1C-208ENST00000478736 GPCPD1Q9NPB8 672 aa4.2□□□□□ -1.74
PDE1C-208ENST00000478736 TLL1O43897 1013 aa4.19□□□□□ -1.74
PDE1C-208ENST00000478736 NDUFV2P19404 249 aa4.19□□□□□ -1.74
PDE1C-208ENST00000478736 FBXO31Q5XUX0 539 aaPredicted RBP4.19□□□□□ -1.74
PDE1C-208ENST00000478736 TRAF7Q6Q0C0 670 aa4.19□□□□□ -1.74
PDE1C-208ENST00000478736 SYMPKQ92797 1274 aaKnown RBP4.19□□□□□ -1.74
PDE1C-208ENST00000478736 FAM117AQ9C073 453 aa4.19□□□□□ -1.74
PDE1C-208ENST00000478736 ACTN4O43707 911 aaKnown RBP4.18□□□□□ -1.74
PDE1C-208ENST00000478736 CLCN1P35523 988 aa4.18□□□□□ -1.74
PDE1C-208ENST00000478736 BRPF1P55201 1214 aaPredicted RBP4.18□□□□□ -1.74
PDE1C-208ENST00000478736 IFFO2Q5TF58 517 aa4.18□□□□□ -1.74
PDE1C-208ENST00000478736 ZNF775Q96BV0 537 aaPredicted RBP4.18□□□□□ -1.74
PDE1C-208ENST00000478736 BEGAINQ9BUH8 593 aa4.18□□□□□ -1.74
PDE1C-208ENST00000478736 KDM4CQ9H3R0 1056 aa4.18□□□□□ -1.74
PDE1C-208ENST00000478736 PLEKHG3A1L390 1219 aa4.17□□□□□ -1.74
PDE1C-208ENST00000478736 PPEF1O14829 653 aaPredicted RBP4.17□□□□□ -1.74
PDE1C-208ENST00000478736 MORN1Q5T089 497 aa4.17□□□□□ -1.74
PDE1C-208ENST00000478736 SCUBE3Q8IX30 993 aa4.17□□□□□ -1.74
PDE1C-208ENST00000478736 SPIRE2Q8WWL2 714 aa4.17□□□□□ -1.74
PDE1C-208ENST00000478736 PCDHGC3Q9UN70 934 aa4.17□□□□□ -1.74
PDE1C-208ENST00000478736 SLC27A5Q9Y2P5 690 aa4.17□□□□□ -1.74
PDE1C-208ENST00000478736 MOXD2PA6NHM9 499 aa4.16□□□□□ -1.74
PDE1C-208ENST00000478736 RNF19BQ6ZMZ0 732 aa4.16□□□□□ -1.74
PDE1C-208ENST00000478736 PCDHB3Q9Y5E6 796 aa4.16□□□□□ -1.74
PDE1C-208ENST00000478736 PCDHB15Q9Y5E8 787 aa4.16□□□□□ -1.74
PDE1C-208ENST00000478736 KDM4AO75164 1064 aa4.15□□□□□ -1.75
PDE1C-208ENST00000478736 ITGBL1O95965 494 aaPredicted RBP4.15□□□□□ -1.75
PDE1C-208ENST00000478736 NEUROD2Q15784 382 aa4.15□□□□□ -1.75
PDE1C-208ENST00000478736 ZNF787Q6DD87 383 aa4.15□□□□□ -1.75
PDE1C-208ENST00000478736 IL27Q8NEV9 243 aa4.15□□□□□ -1.75
PDE1C-208ENST00000478736 THAP11Q96EK4 314 aa4.15□□□□□ -1.75
PDE1C-208ENST00000478736 TBC1D2Q9BYX2 928 aa4.15□□□□□ -1.75
PDE1C-208ENST00000478736 HOXA2O43364 376 aa4.14□□□□□ -1.75
PDE1C-208ENST00000478736 ZPR1O75312 459 aa4.14□□□□□ -1.75
PDE1C-208ENST00000478736 ATP6V1AP38606 617 aa4.14□□□□□ -1.75
PDE1C-208ENST00000478736 SULF1Q8IWU6 871 aa4.14□□□□□ -1.75
PDE1C-208ENST00000478736 FAM160A2Q8N612 972 aaPredicted RBP4.14□□□□□ -1.75
PDE1C-208ENST00000478736 PROCA1Q8NCQ7 364 aaPredicted RBP4.14□□□□□ -1.75
PDE1C-208ENST00000478736 EMID1Q96A84 441 aaPredicted RBP4.14□□□□□ -1.75
PDE1C-208ENST00000478736 PRDM9Q9NQV7 894 aa4.14□□□□□ -1.75
PDE1C-208ENST00000478736 POLR3EQ9NVU0 708 aa4.14□□□□□ -1.75
PDE1C-208ENST00000478736 LIMD1Q9UGP4 676 aa4.14□□□□□ -1.75
PDE1C-208ENST00000478736 KCNC4Q03721 635 aa4.13□□□□□ -1.75
PDE1C-208ENST00000478736 CSPP1Q1MSJ5 1256 aa4.13□□□□□ -1.75
PDE1C-208ENST00000478736 KMT5BQ4FZB7 885 aa4.13□□□□□ -1.75
PDE1C-208ENST00000478736 PPP1R18Q6NYC8 613 aa4.13□□□□□ -1.75
PDE1C-208ENST00000478736 CABLES1Q8TDN4 633 aa4.13□□□□□ -1.75
PDE1C-208ENST00000478736 IL21Q9HBE4 155 aa4.13□□□□□ -1.75
PDE1C-208ENST00000478736 S1PR4O95977 384 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms