RNA–Protein interactions for RNA: ENST00000478716.1

RBMS3-213, Transcript of RNA binding motif single stranded interacting protein 3, human

TSL 4

Gene RBMS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RBMS3-213	ENST00000478716	DAXX	Q9UER7	740 aa	Predicted RBP	11.2	□□□□□ -0.62
RBMS3-213	ENST00000478716	SSTR3	P32745	418 aa	Predicted RBP	11.17	□□□□□ -0.62
RBMS3-213	ENST00000478716	FAM217B	Q9NTX9	383 aa	Predicted RBP	11.17	□□□□□ -0.62
RBMS3-213	ENST00000478716	MS4A1	P11836	297 aa		11.16	□□□□□ -0.62
RBMS3-213	ENST00000478716	HDGF	P51858	240 aa	Known RBP	11.16	□□□□□ -0.62
RBMS3-213	ENST00000478716	SWT1	Q5T5J6	900 aa	Known RBP	11.16	□□□□□ -0.62
RBMS3-213	ENST00000478716	ZFR	Q96KR1	1074 aa	Known RBP	11.16	□□□□□ -0.62
RBMS3-213	ENST00000478716	FAM117A	Q9C073	453 aa		11.15	□□□□□ -0.62
RBMS3-213	ENST00000478716	GOLGA8CP	A6NN73	597 aa		11.14	□□□□□ -0.63
RBMS3-213	ENST00000478716	SAMD7	Q7Z3H4	446 aa		11.14	□□□□□ -0.63
RBMS3-213	ENST00000478716	IL27	Q8NEV9	243 aa		11.14	□□□□□ -0.63
RBMS3-213	ENST00000478716	DDX11L8	A8MPP1	907 aa		11.13	□□□□□ -0.63
RBMS3-213	ENST00000478716	SULF1	Q8IWU6	871 aa		11.12	□□□□□ -0.63
RBMS3-213	ENST00000478716	DDRGK1	Q96HY6	314 aa		11.11	□□□□□ -0.63
RBMS3-213	ENST00000478716	SLC4A3	P48751	1232 aa		11.1	□□□□□ -0.63
RBMS3-213	ENST00000478716	RDH13	Q8NBN7	331 aa		11.1	□□□□□ -0.63
RBMS3-213	ENST00000478716	BEGAIN	Q9BUH8	593 aa		11.1	□□□□□ -0.63
RBMS3-213	ENST00000478716	RNF40	O75150	1001 aa		11.09	□□□□□ -0.63
RBMS3-213	ENST00000478716	SLF2	Q8IX21	1173 aa		11.09	□□□□□ -0.63
RBMS3-213	ENST00000478716	ANKK1	Q8NFD2	765 aa		11.09	□□□□□ -0.63
RBMS3-213	ENST00000478716	LRCH3	Q96II8	777 aa		11.09	□□□□□ -0.63
RBMS3-213	ENST00000478716	PLEKHG3	A1L390	1219 aa		11.08	□□□□□ -0.64
RBMS3-213	ENST00000478716	CD46	P15529	392 aa		11.08	□□□□□ -0.64
RBMS3-213	ENST00000478716	TMEM132A	Q24JP5	1023 aa		11.08	□□□□□ -0.64
RBMS3-213	ENST00000478716	WNT2B	Q93097	391 aa		11.08	□□□□□ -0.64
RBMS3-213	ENST00000478716	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	11.08	□□□□□ -0.64
RBMS3-213	ENST00000478716	RSPH4A	Q5TD94	716 aa		11.07	□□□□□ -0.64
RBMS3-213	ENST00000478716	PCDH10	Q9P2E7	1040 aa		11.07	□□□□□ -0.64
RBMS3-213	ENST00000478716	SLC10A3	P09131	477 aa		11.06	□□□□□ -0.64
RBMS3-213	ENST00000478716	SOWAHB	A6NEL2	793 aa		11.04	□□□□□ -0.64
RBMS3-213	ENST00000478716	BCAM	P50895	628 aa		11.04	□□□□□ -0.64
RBMS3-213	ENST00000478716	KCTD12	Q96CX2	325 aa	Known RBP	11.03	□□□□□ -0.64
RBMS3-213	ENST00000478716	GCGR	P47871	477 aa		11.02	□□□□□ -0.65
RBMS3-213	ENST00000478716	HPS5	Q9UPZ3	1129 aa		11.01	□□□□□ -0.65
RBMS3-213	ENST00000478716	CFH	P08603	1231 aa		11	□□□□□ -0.65
RBMS3-213	ENST00000478716	PPP4C	P60510	307 aa		11	□□□□□ -0.65
RBMS3-213	ENST00000478716	NUTM1	Q86Y26	1132 aa		11	□□□□□ -0.65
RBMS3-213	ENST00000478716	TSR3	Q9UJK0	312 aa	Known RBP	11	□□□□□ -0.65
RBMS3-213	ENST00000478716	THSD4	Q6ZMP0	1018 aa		10.99	□□□□□ -0.65
RBMS3-213	ENST00000478716	SPIRE2	Q8WWL2	714 aa		10.99	□□□□□ -0.65
RBMS3-213	ENST00000478716	NECTIN2	Q92692	538 aa		10.99	□□□□□ -0.65
RBMS3-213	ENST00000478716	TBC1D2	Q9BYX2	928 aa		10.99	□□□□□ -0.65
RBMS3-213	ENST00000478716	MYT1L	Q9UL68	1186 aa		10.99	□□□□□ -0.65
RBMS3-213	ENST00000478716	KDM4A	O75164	1064 aa		10.98	□□□□□ -0.65
RBMS3-213	ENST00000478716	RSPH6A	Q9H0K4	717 aa		10.98	□□□□□ -0.65
RBMS3-213	ENST00000478716	DIXDC1	Q155Q3	683 aa		10.97	□□□□□ -0.65
RBMS3-213	ENST00000478716	KMT5B	Q4FZB7	885 aa		10.96	□□□□□ -0.65
RBMS3-213	ENST00000478716	SH3D19	Q5HYK7	790 aa		10.96	□□□□□ -0.65
RBMS3-213	ENST00000478716	MYSM1	Q5VVJ2	828 aa		10.95	□□□□□ -0.66
RBMS3-213	ENST00000478716	SPNS2	Q8IVW8	549 aa		10.95	□□□□□ -0.66
RBMS3-213	ENST00000478716	WBP1L	Q9NX94	342 aa		10.95	□□□□□ -0.66
RBMS3-213	ENST00000478716	POLR3E	Q9NVU0	708 aa		10.94	□□□□□ -0.66
RBMS3-213	ENST00000478716	USP46	P62068	366 aa		10.93	□□□□□ -0.66
RBMS3-213	ENST00000478716	FUT2	Q10981	343 aa		10.93	□□□□□ -0.66
RBMS3-213	ENST00000478716	SKIV2L	Q15477	1246 aa	Known RBP	10.93	□□□□□ -0.66
RBMS3-213	ENST00000478716	GOPC	Q9HD26	462 aa		10.93	□□□□□ -0.66
RBMS3-213	ENST00000478716	PLSCR2	Q9NRY7	297 aa		10.93	□□□□□ -0.66
RBMS3-213	ENST00000478716	ACTN4	O43707	911 aa	Known RBP	10.92	□□□□□ -0.66
RBMS3-213	ENST00000478716	APLP1	P51693	650 aa		10.92	□□□□□ -0.66
RBMS3-213	ENST00000478716	PTPN5	P54829	565 aa		10.92	□□□□□ -0.66
RBMS3-213	ENST00000478716	PRR14	Q9BWN1	585 aa		10.92	□□□□□ -0.66
RBMS3-213	ENST00000478716	MOXD2P	A6NHM9	499 aa		10.91	□□□□□ -0.66
RBMS3-213	ENST00000478716	HOXA2	O43364	376 aa		10.91	□□□□□ -0.66
RBMS3-213	ENST00000478716	NDUFV2	P19404	249 aa		10.91	□□□□□ -0.66
RBMS3-213	ENST00000478716	RIC3	Q7Z5B4	369 aa		10.91	□□□□□ -0.66
RBMS3-213	ENST00000478716	PCMTD1	Q96MG8	357 aa	Predicted RBP	10.91	□□□□□ -0.66
RBMS3-213	ENST00000478716	ATP1B4	Q9UN42	357 aa	Predicted RBP	10.91	□□□□□ -0.66
RBMS3-213	ENST00000478716	ATP6V1A	P38606	617 aa		10.89	□□□□□ -0.67
RBMS3-213	ENST00000478716	CLK2	P49760	499 aa	Known RBP	10.89	□□□□□ -0.67
RBMS3-213	ENST00000478716	GRIPAP1	Q4V328	841 aa		10.89	□□□□□ -0.67
RBMS3-213	ENST00000478716	RNF166	Q96A37	237 aa	Predicted RBP	10.89	□□□□□ -0.67
RBMS3-213	ENST00000478716	SPTLC1	O15269	473 aa		10.88	□□□□□ -0.67
RBMS3-213	ENST00000478716	RSBN1L	Q6PCB5	846 aa	Predicted RBP	10.88	□□□□□ -0.67
RBMS3-213	ENST00000478716	PROCA1	Q8NCQ7	364 aa	Predicted RBP	10.88	□□□□□ -0.67
RBMS3-213	ENST00000478716	HLA-C	Q95604	372 aa		10.88	□□□□□ -0.67
RBMS3-213	ENST00000478716	LIMD1	Q9UGP4	676 aa		10.88	□□□□□ -0.67
RBMS3-213	ENST00000478716	PUS10	Q3MIT2	529 aa	Known RBP	10.87	□□□□□ -0.67
RBMS3-213	ENST00000478716	FDX1	P10109	184 aa		10.86	□□□□□ -0.67
RBMS3-213	ENST00000478716	GUCA2A	Q02747	115 aa		10.86	□□□□□ -0.67
RBMS3-213	ENST00000478716	NYAP1	Q6ZVC0	841 aa		10.86	□□□□□ -0.67
RBMS3-213	ENST00000478716	GJA5	P36382	358 aa		10.85	□□□□□ -0.67
RBMS3-213	ENST00000478716	CSPP1	Q1MSJ5	1256 aa		10.85	□□□□□ -0.67
RBMS3-213	ENST00000478716	PCDHB3	Q9Y5E6	796 aa		10.85	□□□□□ -0.67
RBMS3-213	ENST00000478716	MORN1	Q5T089	497 aa		10.84	□□□□□ -0.67
RBMS3-213	ENST00000478716	PCDHB15	Q9Y5E8	787 aa		10.84	□□□□□ -0.67
RBMS3-213	ENST00000478716	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	10.83	□□□□□ -0.68
RBMS3-213	ENST00000478716	PCDHGC3	Q9UN70	934 aa		10.83	□□□□□ -0.68
RBMS3-213	ENST00000478716	TUSC1	Q2TAM9	212 aa		10.82	□□□□□ -0.68
RBMS3-213	ENST00000478716	BLOC1S3	Q6QNY0	202 aa		10.82	□□□□□ -0.68
RBMS3-213	ENST00000478716	SLC27A5	Q9Y2P5	690 aa		10.82	□□□□□ -0.68
RBMS3-213	ENST00000478716	HCST	Q9UBK5	93 aa		10.81	□□□□□ -0.68
RBMS3-213	ENST00000478716	GTF3C3	Q9Y5Q9	886 aa		10.81	□□□□□ -0.68
RBMS3-213	ENST00000478716	COPS2	P61201	443 aa		10.8	□□□□□ -0.68
RBMS3-213	ENST00000478716	MMRN1	Q13201	1228 aa		10.8	□□□□□ -0.68
RBMS3-213	ENST00000478716	NR1I2	O75469	434 aa		10.79	□□□□□ -0.68
RBMS3-213	ENST00000478716	QPCT	Q16769	361 aa		10.79	□□□□□ -0.68
RBMS3-213	ENST00000478716	CABLES1	Q8TDN4	633 aa		10.79	□□□□□ -0.68
RBMS3-213	ENST00000478716	PRPF38B	Q5VTL8	546 aa	Known RBP	10.78	□□□□□ -0.68
RBMS3-213	ENST00000478716	SCUBE3	Q8IX30	993 aa		10.78	□□□□□ -0.68
RBMS3-213	ENST00000478716	NUTM2B	A6NNL0	878 aa	Predicted RBP	10.77	□□□□□ -0.69

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