RNA–Protein interactions for RNA: ENST00000478702.5

GARNL3-215, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 577 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-215ENST00000478702 NKTRP30414 1462 aaKnown RBP24.28■■□□□ 1.48
GARNL3-215ENST00000478702 RBM33Q96EV2 1170 aaKnown RBP24.28■■□□□ 1.48
GARNL3-215ENST00000478702 RPRD2Q5VT52 1461 aaKnown RBP24.26■■□□□ 1.47
GARNL3-215ENST00000478702 TMEM131LA2VDJ0 1609 aa24.26■■□□□ 1.47
GARNL3-215ENST00000478702 PROSER2Q86WR7 435 aaPredicted RBP24.25■■□□□ 1.47
GARNL3-215ENST00000478702 ZFYVE9O95405 1425 aa24.25■■□□□ 1.47
GARNL3-215ENST00000478702 PPARGC1BQ86YN6 1023 aaKnown RBP24.24■■□□□ 1.47
GARNL3-215ENST00000478702 SLC52A1Q9NWF4 448 aa24.24■■□□□ 1.47
GARNL3-215ENST00000478702 ANKRD50Q9ULJ7 1429 aa24.23■■□□□ 1.47
GARNL3-215ENST00000478702 UNC13BO14795 1591 aa24.23■■□□□ 1.47
GARNL3-215ENST00000478702 PHLPP1O60346 1717 aa24.23■■□□□ 1.47
GARNL3-215ENST00000478702 E9PCH4 1651 aa24.21■■□□□ 1.47
GARNL3-215ENST00000478702 RRBP1Q9P2E9 1410 aaKnown RBP24.21■■□□□ 1.47
GARNL3-215ENST00000478702 PLEKHG1Q9ULL1 1385 aa24.18■■□□□ 1.46
GARNL3-215ENST00000478702 ROCK1Q13464 1354 aa24.17■■□□□ 1.46
GARNL3-215ENST00000478702 POTEAQ6S8J7 498 aa24.17■■□□□ 1.46
GARNL3-215ENST00000478702 RIMS2Q9UQ26 1411 aa24.17■■□□□ 1.46
GARNL3-215ENST00000478702 MSH6P52701 1360 aa24.16■■□□□ 1.46
GARNL3-215ENST00000478702 COL16A1Q07092 1604 aaPredicted RBP24.14■■□□□ 1.46
GARNL3-215ENST00000478702 BCANQ96GW7 911 aa24.14■■□□□ 1.45
GARNL3-215ENST00000478702 SETD1AO15047 1707 aaKnown RBP24.13■■□□□ 1.45
GARNL3-215ENST00000478702 IQGAP3Q86VI3 1631 aa24.13■■□□□ 1.45
GARNL3-215ENST00000478702 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.13■■□□□ 1.45
GARNL3-215ENST00000478702 SLAIN2Q9P270 581 aa24.11■■□□□ 1.45
GARNL3-215ENST00000478702 ADAMTS13Q76LX8 1427 aa24.1■■□□□ 1.45
GARNL3-215ENST00000478702 DIP2AQ14689 1571 aa24.08■■□□□ 1.45
GARNL3-215ENST00000478702 PPP1R15AO75807 674 aaPredicted RBP24.07■■□□□ 1.44
GARNL3-215ENST00000478702 TBX22Q9Y458 520 aa24.07■■□□□ 1.44
GARNL3-215ENST00000478702 JCADQ9P266 1359 aa24.05■■□□□ 1.44
GARNL3-215ENST00000478702 NCOA3Q9Y6Q9 1424 aa24.05■■□□□ 1.44
GARNL3-215ENST00000478702 HDGFP51858 240 aaKnown RBP24.05■■□□□ 1.44
GARNL3-215ENST00000478702 SHPRHQ149N8 1683 aa24.03■■□□□ 1.44
GARNL3-215ENST00000478702 CHGAP10645 457 aaKnown RBP24.03■■□□□ 1.44
GARNL3-215ENST00000478702 NUTM2DQ5VT03 806 aaPredicted RBP24.03■■□□□ 1.44
GARNL3-215ENST00000478702 AHDC1Q5TGY3 1603 aaPredicted RBP24.02■■□□□ 1.44
GARNL3-215ENST00000478702 ITGAEP38570 1179 aa24.02■■□□□ 1.44
GARNL3-215ENST00000478702 LRP6O75581 1613 aa24.02■■□□□ 1.44
GARNL3-215ENST00000478702 NRXN3Q9Y4C0 1643 aa24.02■■□□□ 1.44
GARNL3-215ENST00000478702 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.01■■□□□ 1.43
GARNL3-215ENST00000478702 SPHKAPQ2M3C7 1700 aa24.01■■□□□ 1.43
GARNL3-215ENST00000478702 PIK3R4Q99570 1358 aa24■■□□□ 1.43
GARNL3-215ENST00000478702 TRPM2O94759 1503 aa24■■□□□ 1.43
GARNL3-215ENST00000478702 PTPRUQ92729 1446 aa23.99■■□□□ 1.43
GARNL3-215ENST00000478702 XRN1Q8IZH2 1706 aaKnown RBP23.98■■□□□ 1.43
GARNL3-215ENST00000478702 C14orf37Q86TY3 774 aa23.94■■□□□ 1.42
GARNL3-215ENST00000478702 C19orf44Q9H6X5 657 aa23.94■■□□□ 1.42
GARNL3-215ENST00000478702 NAIPQ13075 1403 aa23.93■■□□□ 1.42
GARNL3-215ENST00000478702 NUP155O75694 1391 aa23.93■■□□□ 1.42
GARNL3-215ENST00000478702 CADPS2Q86UW7 1296 aa23.93■■□□□ 1.42
GARNL3-215ENST00000478702 SPATA31A6Q5VVP1 1343 aa23.92■■□□□ 1.42
GARNL3-215ENST00000478702 SETBP1Q9Y6X0 1596 aa23.92■■□□□ 1.42
GARNL3-215ENST00000478702 NHSL1Q5SYE7 1610 aa23.92■■□□□ 1.42
GARNL3-215ENST00000478702 AMOTL2Q9Y2J4 779 aa23.91■■□□□ 1.42
GARNL3-215ENST00000478702 HFM1A2PYH4 1435 aa23.91■■□□□ 1.42
GARNL3-215ENST00000478702 ATF3P18847 181 aa23.89■■□□□ 1.41
GARNL3-215ENST00000478702 BRINP3Q76B58 766 aa23.87■■□□□ 1.41
GARNL3-215ENST00000478702 DCCP43146 1447 aa23.86■■□□□ 1.41
GARNL3-215ENST00000478702 ASXL1Q8IXJ9 1541 aa23.86■■□□□ 1.41
GARNL3-215ENST00000478702 CLTCL1P53675 1640 aa23.86■■□□□ 1.41
GARNL3-215ENST00000478702 NALCNQ8IZF0 1738 aa23.86■■□□□ 1.41
GARNL3-215ENST00000478702 KIF1BO60333 1816 aa23.85■■□□□ 1.41
GARNL3-215ENST00000478702 NEXMIFQ5QGS0 1516 aa23.84■■□□□ 1.41
GARNL3-215ENST00000478702 MST1RQ04912 1400 aa23.84■■□□□ 1.41
GARNL3-215ENST00000478702 MEX3CQ5U5Q3 659 aaKnown RBP23.82■■□□□ 1.4
GARNL3-215ENST00000478702 METP08581 1390 aa23.81■■□□□ 1.4
GARNL3-215ENST00000478702 ZNF772Q68DY9 489 aaPredicted RBP23.81■■□□□ 1.4
GARNL3-215ENST00000478702 SETD5Q9C0A6 1442 aa23.79■■□□□ 1.4
GARNL3-215ENST00000478702 TRIM52Q96A61 297 aa23.77■■□□□ 1.4
GARNL3-215ENST00000478702 ZNF326Q5BKZ1 582 aaKnown RBP23.76■■□□□ 1.39
GARNL3-215ENST00000478702 UPF1Q92900 1129 aaKnown RBP eCLIP23.76■■□□□ 1.39
GARNL3-215ENST00000478702 ADGRL3Q9HAR2 1447 aa23.76■■□□□ 1.39
GARNL3-215ENST00000478702 NUTM2BA6NNL0 878 aaPredicted RBP23.75■■□□□ 1.39
GARNL3-215ENST00000478702 NUTM2EB1AL46 878 aaPredicted RBP23.75■■□□□ 1.39
GARNL3-215ENST00000478702 NUTM2AQ8IVF1 878 aaPredicted RBP23.75■■□□□ 1.39
GARNL3-215ENST00000478702 LAMC1P11047 1609 aa23.73■■□□□ 1.39
GARNL3-215ENST00000478702 CDK12Q9NYV4 1490 aaPredicted RBP23.73■■□□□ 1.39
GARNL3-215ENST00000478702 AFF2P51816 1311 aa23.71■■□□□ 1.39
GARNL3-215ENST00000478702 RXRBP28702 533 aa23.71■■□□□ 1.39
GARNL3-215ENST00000478702 DDX17Q92841 729 aaKnown RBP23.71■■□□□ 1.39
GARNL3-215ENST00000478702 PNPLA6Q8IY17 1366 aa23.69■■□□□ 1.38
GARNL3-215ENST00000478702 PPLO60437 1756 aa23.69■■□□□ 1.38
GARNL3-215ENST00000478702 LRRC59Q96AG4 307 aaKnown RBP23.68■■□□□ 1.38
GARNL3-215ENST00000478702 C1orf167Q5SNV9 1468 aa23.66■■□□□ 1.38
GARNL3-215ENST00000478702 PTCH1Q13635 1447 aa23.65■■□□□ 1.38
GARNL3-215ENST00000478702 RGS12O14924 1447 aa23.63■■□□□ 1.37
GARNL3-215ENST00000478702 ROBO2Q9HCK4 1378 aa23.62■■□□□ 1.37
GARNL3-215ENST00000478702 PRAG1Q86YV5 1406 aa23.61■■□□□ 1.37
GARNL3-215ENST00000478702 C8orf37Q96NL8 207 aa23.61■■□□□ 1.37
GARNL3-215ENST00000478702 COL22A1Q8NFW1 1626 aaPredicted RBP23.59■■□□□ 1.37
GARNL3-215ENST00000478702 MARF1Q9Y4F3 1742 aaKnown RBP23.57■■□□□ 1.36
GARNL3-215ENST00000478702 ORAI2Q96SN7 254 aa23.57■■□□□ 1.36
GARNL3-215ENST00000478702 QTRT2Q9H974 415 aaKnown RBP23.57■■□□□ 1.36
GARNL3-215ENST00000478702 SOS2Q07890 1332 aaPredicted RBP23.57■■□□□ 1.36
GARNL3-215ENST00000478702 RBM6P78332 1123 aaKnown RBP23.56■■□□□ 1.36
GARNL3-215ENST00000478702 VGFO15240 615 aaPredicted RBP23.55■■□□□ 1.36
GARNL3-215ENST00000478702 SLC4A1APQ9BWU0 796 aaKnown RBP23.55■■□□□ 1.36
GARNL3-215ENST00000478702 IFT172Q9UG01 1749 aa23.53■■□□□ 1.36
GARNL3-215ENST00000478702 ADAMTS2O95450 1211 aa23.53■■□□□ 1.36
GARNL3-215ENST00000478702 CDC42BPGQ6DT37 1551 aa23.52■■□□□ 1.36
GARNL3-215ENST00000478702 NGLY1Q96IV0 654 aa23.51■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms