RNA–Protein interactions for RNA: ENST00000478644.1

HOXB3-209, Transcript of homeobox B3, humanhuman

TSL 4

Gene HOXB3, Length 398 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-209ENST00000478644 MAP3K7O43318 606 aa10.95□□□□□ -0.66
HOXB3-209ENST00000478644 TSR1Q2NL82 804 aaKnown RBP10.95□□□□□ -0.66
HOXB3-209ENST00000478644 PBRM1Q86U86 1689 aa10.95□□□□□ -0.66
HOXB3-209ENST00000478644 BIVM-ERCC5R4GMW8 1640 aa10.95□□□□□ -0.66
HOXB3-209ENST00000478644 ARAP1Q96P48 1450 aa10.94□□□□□ -0.66
HOXB3-209ENST00000478644 TRIM6-TRIM34B2RNG4 842 aa10.94□□□□□ -0.66
HOXB3-209ENST00000478644 LAPTM4BQ86VI4 370 aa10.94□□□□□ -0.66
HOXB3-209ENST00000478644 CERKQ8TCT0 537 aa10.94□□□□□ -0.66
HOXB3-209ENST00000478644 KCTD12Q96CX2 325 aaKnown RBP10.94□□□□□ -0.66
HOXB3-209ENST00000478644 ERICH3Q5RHP9 1530 aa10.93□□□□□ -0.66
HOXB3-209ENST00000478644 FHAD1B1AJZ9 1412 aa10.92□□□□□ -0.66
HOXB3-209ENST00000478644 KIAA1468Q9P260 1216 aa10.92□□□□□ -0.66
HOXB3-209ENST00000478644 GRIN2AQ12879 1464 aa10.9□□□□□ -0.66
HOXB3-209ENST00000478644 GOLGA8CPA6NN73 597 aa10.89□□□□□ -0.67
HOXB3-209ENST00000478644 THSD4Q6ZMP0 1018 aa10.89□□□□□ -0.67
HOXB3-209ENST00000478644 WNT2BQ93097 391 aa10.89□□□□□ -0.67
HOXB3-209ENST00000478644 TSKSQ9UJT2 592 aa10.89□□□□□ -0.67
HOXB3-209ENST00000478644 PRSS12P56730 875 aa10.88□□□□□ -0.67
HOXB3-209ENST00000478644 NUP160Q12769 1436 aa10.88□□□□□ -0.67
HOXB3-209ENST00000478644 RBM27Q9P2N5 1060 aaKnown RBP10.88□□□□□ -0.67
HOXB3-209ENST00000478644 MLLT3P42568 568 aaPredicted RBP10.87□□□□□ -0.67
HOXB3-209ENST00000478644 CDCA7LQ96GN5 454 aa10.87□□□□□ -0.67
HOXB3-209ENST00000478644 NPDC1Q9NQX5 325 aaPredicted RBP10.87□□□□□ -0.67
HOXB3-209ENST00000478644 HAP1P54257 671 aaPredicted RBP10.86□□□□□ -0.67
HOXB3-209ENST00000478644 PACS2Q86VP3 889 aa10.86□□□□□ -0.67
HOXB3-209ENST00000478644 ADAMTS12P58397 1594 aa10.86□□□□□ -0.67
HOXB3-209ENST00000478644 FAM98CQ17RN3 349 aaKnown RBP10.84□□□□□ -0.67
HOXB3-209ENST00000478644 TTC13Q8NBP0 860 aa10.84□□□□□ -0.67
HOXB3-209ENST00000478644 ZFRQ96KR1 1074 aaKnown RBP10.84□□□□□ -0.67
HOXB3-209ENST00000478644 CDHR5Q9HBB8 845 aa10.84□□□□□ -0.67
HOXB3-209ENST00000478644 FAM198AQ9UFP1 575 aa10.84□□□□□ -0.67
HOXB3-209ENST00000478644 KDM2AQ9Y2K7 1162 aa10.84□□□□□ -0.67
HOXB3-209ENST00000478644 ANKK1Q8NFD2 765 aa10.82□□□□□ -0.68
HOXB3-209ENST00000478644 KIF27Q86VH2 1401 aa10.82□□□□□ -0.68
HOXB3-209ENST00000478644 SOWAHBA6NEL2 793 aa10.81□□□□□ -0.68
HOXB3-209ENST00000478644 PTPN5P54829 565 aa10.81□□□□□ -0.68
HOXB3-209ENST00000478644 SEPT9Q9UHD8 586 aaPredicted RBP10.81□□□□□ -0.68
HOXB3-209ENST00000478644 SHROOM2Q13796 1616 aa10.8□□□□□ -0.68
HOXB3-209ENST00000478644 SEMA3EO15041 775 aa10.8□□□□□ -0.68
HOXB3-209ENST00000478644 VSIG10Q8N0Z9 540 aa10.8□□□□□ -0.68
HOXB3-209ENST00000478644 CEP170Q5SW79 1584 aa10.79□□□□□ -0.68
HOXB3-209ENST00000478644 PLA2G2EQ9NZK7 142 aa10.79□□□□□ -0.68
HOXB3-209ENST00000478644 TESPA1A2RU30 521 aaPredicted RBP10.77□□□□□ -0.69
HOXB3-209ENST00000478644 C3orf80F5H4A9 247 aa10.77□□□□□ -0.69
HOXB3-209ENST00000478644 IFFO2Q5TF58 517 aa10.77□□□□□ -0.69
HOXB3-209ENST00000478644 TATDN2Q93075 761 aa10.77□□□□□ -0.69
HOXB3-209ENST00000478644 PRG4Q92954 1404 aaPredicted RBP10.76□□□□□ -0.69
HOXB3-209ENST00000478644 CUL7Q14999 1698 aa10.76□□□□□ -0.69
HOXB3-209ENST00000478644 NBPF26B4DH59 902 aa10.76□□□□□ -0.69
HOXB3-209ENST00000478644 PTGDRQ13258 359 aa10.76□□□□□ -0.69
HOXB3-209ENST00000478644 NYAP1Q6ZVC0 841 aa10.76□□□□□ -0.69
HOXB3-209ENST00000478644 IGF1RP08069 1367 aa10.76□□□□□ -0.69
HOXB3-209ENST00000478644 KIAA0586Q9BVV6 1533 aa10.75□□□□□ -0.69
HOXB3-209ENST00000478644 BCAMP50895 628 aa10.75□□□□□ -0.69
HOXB3-209ENST00000478644 PADI6Q6TGC4 694 aa10.73□□□□□ -0.69
HOXB3-209ENST00000478644 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.73□□□□□ -0.69
HOXB3-209ENST00000478644 PNMA3Q9UL41 463 aa10.73□□□□□ -0.69
HOXB3-209ENST00000478644 SMAPO00193 183 aa10.72□□□□□ -0.69
HOXB3-209ENST00000478644 NUDT18Q6ZVK8 323 aa10.72□□□□□ -0.69
HOXB3-209ENST00000478644 LRCH3Q96II8 777 aa10.72□□□□□ -0.69
HOXB3-209ENST00000478644 CARMIL1Q5VZK9 1371 aa10.71□□□□□ -0.69
HOXB3-209ENST00000478644 SMYD5Q6GMV2 418 aa10.71□□□□□ -0.69
HOXB3-209ENST00000478644 TSR3Q9UJK0 312 aaKnown RBP10.71□□□□□ -0.69
HOXB3-209ENST00000478644 RUSC2Q8N2Y8 1516 aa10.7□□□□□ -0.7
HOXB3-209ENST00000478644 CARMIL2Q6F5E8 1435 aa10.7□□□□□ -0.7
HOXB3-209ENST00000478644 EYA1Q99502 592 aa10.7□□□□□ -0.7
HOXB3-209ENST00000478644 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
HOXB3-209ENST00000478644 ERCC6L2Q5T890 1561 aa10.69□□□□□ -0.7
HOXB3-209ENST00000478644 ITGBL1O95965 494 aaPredicted RBP10.68□□□□□ -0.7
HOXB3-209ENST00000478644 SAMD7Q7Z3H4 446 aa10.68□□□□□ -0.7
HOXB3-209ENST00000478644 NUTM2FA1L443 756 aa10.67□□□□□ -0.7
HOXB3-209ENST00000478644 FCHSD2O94868 740 aa10.67□□□□□ -0.7
HOXB3-209ENST00000478644 FAM9AQ8IZU1 332 aaPredicted RBP10.67□□□□□ -0.7
HOXB3-209ENST00000478644 HPS5Q9UPZ3 1129 aa10.66□□□□□ -0.7
HOXB3-209ENST00000478644 MAPKBP1O60336 1514 aa10.66□□□□□ -0.7
HOXB3-209ENST00000478644 TNIKQ9UKE5 1360 aa10.65□□□□□ -0.71
HOXB3-209ENST00000478644 HDGFP51858 240 aaKnown RBP10.64□□□□□ -0.71
HOXB3-209ENST00000478644 PTPRGP23470 1445 aa10.64□□□□□ -0.71
HOXB3-209ENST00000478644 ABCC10Q5T3U5 1492 aa10.63□□□□□ -0.71
HOXB3-209ENST00000478644 PPP4CP60510 307 aa10.63□□□□□ -0.71
HOXB3-209ENST00000478644 HIC1Q14526 733 aa10.63□□□□□ -0.71
HOXB3-209ENST00000478644 RBM26Q5T8P6 1007 aaKnown RBP10.63□□□□□ -0.71
HOXB3-209ENST00000478644 ADGRG1Q9Y653 693 aa10.63□□□□□ -0.71
HOXB3-209ENST00000478644 RAPGEF2Q9Y4G8 1499 aa10.62□□□□□ -0.71
HOXB3-209ENST00000478644 FAM69CQ0P6D2 419 aa10.62□□□□□ -0.71
HOXB3-209ENST00000478644 IQGAP2Q13576 1575 aa10.6□□□□□ -0.71
HOXB3-209ENST00000478644 GPR37O15354 613 aa10.6□□□□□ -0.71
HOXB3-209ENST00000478644 RBM46Q8TBY0 533 aaKnown RBP10.6□□□□□ -0.71
HOXB3-209ENST00000478644 SWT1Q5T5J6 900 aaKnown RBP10.59□□□□□ -0.71
HOXB3-209ENST00000478644 NECTIN2Q92692 538 aa10.59□□□□□ -0.71
HOXB3-209ENST00000478644 UHRF1BP1LA0JNW5 1464 aa10.59□□□□□ -0.71
HOXB3-209ENST00000478644 PLB1Q6P1J6 1458 aa10.58□□□□□ -0.72
HOXB3-209ENST00000478644 DNAJB2P25686 324 aa10.58□□□□□ -0.72
HOXB3-209ENST00000478644 SLF2Q8IX21 1173 aa10.58□□□□□ -0.72
HOXB3-209ENST00000478644 A0A0G2JS52 829 aa10.57□□□□□ -0.72
HOXB3-209ENST00000478644 RGS20O76081 388 aa10.57□□□□□ -0.72
HOXB3-209ENST00000478644 ADCY10Q96PN6 1610 aa10.57□□□□□ -0.72
HOXB3-209ENST00000478644 ABCC2Q92887 1545 aa10.57□□□□□ -0.72
HOXB3-209ENST00000478644 KIF13AQ9H1H9 1805 aa10.56□□□□□ -0.72
HOXB3-209ENST00000478644 GOLGA3Q08378 1498 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms