RNA–Protein interactions for RNA: ENST00000478152.1

CAB39-204, Transcript of calcium binding protein 39, humanhuman

TSL 2

Gene CAB39, Length 654 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAB39-204ENST00000478152 BHMG1C9JSJ3 638 aaPredicted RBP11.99□□□□□ -0.49
CAB39-204ENST00000478152 SWT1Q5T5J6 900 aaKnown RBP11.98□□□□□ -0.49
CAB39-204ENST00000478152 TK2O00142 265 aa11.97□□□□□ -0.49
CAB39-204ENST00000478152 LSM11P83369 360 aaKnown RBP eCLIP11.97□□□□□ -0.49
CAB39-204ENST00000478152 FAM98CQ17RN3 349 aaKnown RBP11.97□□□□□ -0.49
CAB39-204ENST00000478152 SULF1Q8IWU6 871 aa11.97□□□□□ -0.49
CAB39-204ENST00000478152 SKIV2LQ15477 1246 aaKnown RBP11.96□□□□□ -0.49
CAB39-204ENST00000478152 MYSM1Q5VVJ2 828 aa11.96□□□□□ -0.49
CAB39-204ENST00000478152 TBC1D2Q9BYX2 928 aa11.96□□□□□ -0.49
CAB39-204ENST00000478152 RSPH6AQ9H0K4 717 aa11.96□□□□□ -0.49
CAB39-204ENST00000478152 ADGRD1Q6QNK2 874 aa11.95□□□□□ -0.5
CAB39-204ENST00000478152 PROCA1Q8NCQ7 364 aaPredicted RBP11.94□□□□□ -0.5
CAB39-204ENST00000478152 SPIRE2Q8WWL2 714 aa11.94□□□□□ -0.5
CAB39-204ENST00000478152 PCMTD1Q96MG8 357 aaPredicted RBP11.94□□□□□ -0.5
CAB39-204ENST00000478152 POLR3EQ9NVU0 708 aa11.94□□□□□ -0.5
CAB39-204ENST00000478152 SLC10A3P09131 477 aa11.93□□□□□ -0.5
CAB39-204ENST00000478152 LAPTM4BQ86VI4 370 aa11.93□□□□□ -0.5
CAB39-204ENST00000478152 RDH13Q8NBN7 331 aa11.93□□□□□ -0.5
CAB39-204ENST00000478152 NBPF3Q9H094 633 aa11.93□□□□□ -0.5
CAB39-204ENST00000478152 HRO43593 1189 aa11.92□□□□□ -0.5
CAB39-204ENST00000478152 SAMD7Q7Z3H4 446 aa11.92□□□□□ -0.5
CAB39-204ENST00000478152 C14orf37Q86TY3 774 aa11.9□□□□□ -0.5
CAB39-204ENST00000478152 ZFRQ96KR1 1074 aaKnown RBP11.9□□□□□ -0.5
CAB39-204ENST00000478152 ANKRD13DQ6ZTN6 518 aa11.89□□□□□ -0.51
CAB39-204ENST00000478152 MRPL50Q8N5N7 158 aaKnown RBP11.89□□□□□ -0.51
CAB39-204ENST00000478152 GCGRP47871 477 aa11.88□□□□□ -0.51
CAB39-204ENST00000478152 CLK2P49760 499 aaKnown RBP11.88□□□□□ -0.51
CAB39-204ENST00000478152 DIXDC1Q155Q3 683 aa11.88□□□□□ -0.51
CAB39-204ENST00000478152 NUTM1Q86Y26 1132 aa11.88□□□□□ -0.51
CAB39-204ENST00000478152 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.88□□□□□ -0.51
CAB39-204ENST00000478152 LIMD1Q9UGP4 676 aa11.88□□□□□ -0.51
CAB39-204ENST00000478152 HDGFP51858 240 aaKnown RBP11.87□□□□□ -0.51
CAB39-204ENST00000478152 MOXD2PA6NHM9 499 aa11.86□□□□□ -0.51
CAB39-204ENST00000478152 FBXO31Q5XUX0 539 aaPredicted RBP11.86□□□□□ -0.51
CAB39-204ENST00000478152 RIC3Q7Z5B4 369 aa11.86□□□□□ -0.51
CAB39-204ENST00000478152 KDM4AO75164 1064 aa11.85□□□□□ -0.51
CAB39-204ENST00000478152 NDUFV2P19404 249 aa11.85□□□□□ -0.51
CAB39-204ENST00000478152 RSPH4AQ5TD94 716 aa11.85□□□□□ -0.51
CAB39-204ENST00000478152 ERICH6Q7L0X2 663 aa11.85□□□□□ -0.51
CAB39-204ENST00000478152 SLF2Q8IX21 1173 aa11.85□□□□□ -0.51
CAB39-204ENST00000478152 KRTAP3-3Q9BYR6 98 aa11.85□□□□□ -0.51
CAB39-204ENST00000478152 KRTAP3-2Q9BYR7 98 aa11.85□□□□□ -0.51
CAB39-204ENST00000478152 SPTLC1O15269 473 aa11.84□□□□□ -0.51
CAB39-204ENST00000478152 RSBN1LQ6PCB5 846 aaPredicted RBP11.84□□□□□ -0.51
CAB39-204ENST00000478152 ATP1B4Q9UN42 357 aaPredicted RBP11.84□□□□□ -0.51
CAB39-204ENST00000478152 RNF40O75150 1001 aa11.83□□□□□ -0.52
CAB39-204ENST00000478152 HLA-CQ95604 372 aa11.81□□□□□ -0.52
CAB39-204ENST00000478152 HOXA2O43364 376 aa11.8□□□□□ -0.52
CAB39-204ENST00000478152 CFHP08603 1231 aa11.8□□□□□ -0.52
CAB39-204ENST00000478152 SLC4A3P48751 1232 aa11.8□□□□□ -0.52
CAB39-204ENST00000478152 LRCH3Q96II8 777 aa11.8□□□□□ -0.52
CAB39-204ENST00000478152 PCDHB15Q9Y5E8 787 aa11.8□□□□□ -0.52
CAB39-204ENST00000478152 CSPP1Q1MSJ5 1256 aa11.79□□□□□ -0.52
CAB39-204ENST00000478152 TUSC1Q2TAM9 212 aa11.79□□□□□ -0.52
CAB39-204ENST00000478152 CDKN2AIPQ9NXV6 580 aaPredicted RBP11.79□□□□□ -0.52
CAB39-204ENST00000478152 GJA5P36382 358 aa11.78□□□□□ -0.52
CAB39-204ENST00000478152 USP46P62068 366 aa11.78□□□□□ -0.52
CAB39-204ENST00000478152 GUCA2AQ02747 115 aa11.78□□□□□ -0.52
CAB39-204ENST00000478152 FUT2Q10981 343 aa11.77□□□□□ -0.53
CAB39-204ENST00000478152 QPCTQ16769 361 aa11.77□□□□□ -0.53
CAB39-204ENST00000478152 STAC3Q96MF2 364 aa11.77□□□□□ -0.53
CAB39-204ENST00000478152 PPP2R2DQ66LE6 453 aa11.76□□□□□ -0.53
CAB39-204ENST00000478152 ANKK1Q8NFD2 765 aa11.76□□□□□ -0.53
CAB39-204ENST00000478152 PCDHGC3Q9UN70 934 aa11.76□□□□□ -0.53
CAB39-204ENST00000478152 SOWAHBA6NEL2 793 aa11.75□□□□□ -0.53
CAB39-204ENST00000478152 GOLGA8CPA6NN73 597 aa11.75□□□□□ -0.53
CAB39-204ENST00000478152 RFC5P40937 340 aa11.75□□□□□ -0.53
CAB39-204ENST00000478152 BCAMP50895 628 aa11.75□□□□□ -0.53
CAB39-204ENST00000478152 LILRB3O75022 631 aa11.74□□□□□ -0.53
CAB39-204ENST00000478152 FDX1P10109 184 aa11.74□□□□□ -0.53
CAB39-204ENST00000478152 POTEGQ6S5H5 508 aa11.74□□□□□ -0.53
CAB39-204ENST00000478152 FLIIQ13045 1269 aa11.73□□□□□ -0.53
CAB39-204ENST00000478152 CABLES1Q8TDN4 633 aa11.73□□□□□ -0.53
CAB39-204ENST00000478152 WNT2BQ93097 391 aa11.73□□□□□ -0.53
CAB39-204ENST00000478152 RTL5Q5HYW3 569 aaPredicted RBP11.72□□□□□ -0.53
CAB39-204ENST00000478152 HPS5Q9UPZ3 1129 aa11.72□□□□□ -0.53
CAB39-204ENST00000478152 KMT5BQ4FZB7 885 aa11.71□□□□□ -0.53
CAB39-204ENST00000478152 POTEMA6NI47 508 aa11.7□□□□□ -0.54
CAB39-204ENST00000478152 ACTN4O43707 911 aaKnown RBP11.7□□□□□ -0.54
CAB39-204ENST00000478152 HRCP23327 699 aa11.7□□□□□ -0.54
CAB39-204ENST00000478152 ATP6V1AP38606 617 aa11.7□□□□□ -0.54
CAB39-204ENST00000478152 MCM6Q14566 821 aa11.7□□□□□ -0.54
CAB39-204ENST00000478152 CDAN1Q8IWY9 1227 aa11.7□□□□□ -0.54
CAB39-204ENST00000478152 PPP4CP60510 307 aa11.69□□□□□ -0.54
CAB39-204ENST00000478152 PUS10Q3MIT2 529 aaKnown RBP11.69□□□□□ -0.54
CAB39-204ENST00000478152 PRPF38BQ5VTL8 546 aaKnown RBP11.69□□□□□ -0.54
CAB39-204ENST00000478152 APLP1P51693 650 aa11.68□□□□□ -0.54
CAB39-204ENST00000478152 GRIPAP1Q4V328 841 aa11.68□□□□□ -0.54
CAB39-204ENST00000478152 NECTIN2Q92692 538 aa11.68□□□□□ -0.54
CAB39-204ENST00000478152 ZMYND15Q9H091 742 aa11.68□□□□□ -0.54
CAB39-204ENST00000478152 TSR3Q9UJK0 312 aaKnown RBP11.68□□□□□ -0.54
CAB39-204ENST00000478152 NUTM2BA6NNL0 878 aaPredicted RBP11.67□□□□□ -0.54
CAB39-204ENST00000478152 NUTM2EB1AL46 878 aaPredicted RBP11.67□□□□□ -0.54
CAB39-204ENST00000478152 MORN1Q5T089 497 aa11.67□□□□□ -0.54
CAB39-204ENST00000478152 NUTM2DQ5VT03 806 aaPredicted RBP11.67□□□□□ -0.54
CAB39-204ENST00000478152 NUTM2AQ8IVF1 878 aaPredicted RBP11.67□□□□□ -0.54
CAB39-204ENST00000478152 ZBTB3Q9H5J0 574 aa11.67□□□□□ -0.54
CAB39-204ENST00000478152 TMEM259Q4ZIN3 620 aa11.66□□□□□ -0.54
CAB39-204ENST00000478152 SNRKQ9NRH2 765 aa11.66□□□□□ -0.54
CAB39-204ENST00000478152 BANK1Q8NDB2 785 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 11.4 ms