RNA–Protein interactions for RNA: ENST00000478087.5

HPS1-211, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 971 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-211ENST00000478087 NAIPQ13075 1403 aa19.76■□□□□ 0.75
HPS1-211ENST00000478087 TOM1O60784 492 aa19.74■□□□□ 0.75
HPS1-211ENST00000478087 BCANQ96GW7 911 aa19.74■□□□□ 0.75
HPS1-211ENST00000478087 ZFYVE9O95405 1425 aa19.74■□□□□ 0.75
HPS1-211ENST00000478087 RBM33Q96EV2 1170 aaKnown RBP19.73■□□□□ 0.75
HPS1-211ENST00000478087 RIMS2Q9UQ26 1411 aa19.73■□□□□ 0.75
HPS1-211ENST00000478087 SPHKAPQ2M3C7 1700 aa19.72■□□□□ 0.75
HPS1-211ENST00000478087 HSPA1LP34931 641 aa19.71■□□□□ 0.75
HPS1-211ENST00000478087 PPP1R15AO75807 674 aaPredicted RBP19.68■□□□□ 0.74
HPS1-211ENST00000478087 KCNA6P17658 529 aa19.68■□□□□ 0.74
HPS1-211ENST00000478087 DISP3Q9P2K9 1392 aa19.68■□□□□ 0.74
HPS1-211ENST00000478087 CHD2O14647 1828 aaKnown RBP19.67■□□□□ 0.74
HPS1-211ENST00000478087 TRIM52Q96A61 297 aa19.67■□□□□ 0.74
HPS1-211ENST00000478087 PLEKHG1Q9ULL1 1385 aa19.66■□□□□ 0.74
HPS1-211ENST00000478087 PROSER2Q86WR7 435 aaPredicted RBP19.65■□□□□ 0.74
HPS1-211ENST00000478087 HFM1A2PYH4 1435 aa19.65■□□□□ 0.74
HPS1-211ENST00000478087 HDGFP51858 240 aaKnown RBP19.64■□□□□ 0.73
HPS1-211ENST00000478087 TMEM94Q12767 1356 aa19.64■□□□□ 0.73
HPS1-211ENST00000478087 CLTCL1P53675 1640 aa19.63■□□□□ 0.73
HPS1-211ENST00000478087 ILDR2Q71H61 639 aa19.63■□□□□ 0.73
HPS1-211ENST00000478087 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.62■□□□□ 0.73
HPS1-211ENST00000478087 ADAMTS13Q76LX8 1427 aa19.61■□□□□ 0.73
HPS1-211ENST00000478087 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
HPS1-211ENST00000478087 TBX22Q9Y458 520 aa19.6■□□□□ 0.73
HPS1-211ENST00000478087 KIF1BO60333 1816 aa19.6■□□□□ 0.73
HPS1-211ENST00000478087 FOXD1Q16676 465 aa19.59■□□□□ 0.73
HPS1-211ENST00000478087 ZNF326Q5BKZ1 582 aaKnown RBP19.59■□□□□ 0.73
HPS1-211ENST00000478087 SLC4A1APQ9BWU0 796 aaKnown RBP19.58■□□□□ 0.72
HPS1-211ENST00000478087 TRPM2O94759 1503 aa19.56■□□□□ 0.72
HPS1-211ENST00000478087 NRXN3Q9Y4C0 1643 aa19.56■□□□□ 0.72
HPS1-211ENST00000478087 NKTRP30414 1462 aaKnown RBP19.54■□□□□ 0.72
HPS1-211ENST00000478087 PTPRUQ92729 1446 aa19.54■□□□□ 0.72
HPS1-211ENST00000478087 NEXMIFQ5QGS0 1516 aa19.52■□□□□ 0.72
HPS1-211ENST00000478087 AMOTL2Q9Y2J4 779 aa19.51■□□□□ 0.71
HPS1-211ENST00000478087 ROBO1Q9Y6N7 1651 aa19.5■□□□□ 0.71
HPS1-211ENST00000478087 DIP2AQ14689 1571 aa19.5■□□□□ 0.71
HPS1-211ENST00000478087 MED1Q15648 1581 aaPredicted RBP19.49■□□□□ 0.71
HPS1-211ENST00000478087 SETBP1Q9Y6X0 1596 aa19.49■□□□□ 0.71
HPS1-211ENST00000478087 METP08581 1390 aa19.48■□□□□ 0.71
HPS1-211ENST00000478087 MSH6P52701 1360 aa19.48■□□□□ 0.71
HPS1-211ENST00000478087 MPHOSPH9Q99550 1183 aa19.48■□□□□ 0.71
HPS1-211ENST00000478087 FAM135BQ49AJ0 1406 aa19.48■□□□□ 0.71
HPS1-211ENST00000478087 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.48■□□□□ 0.71
HPS1-211ENST00000478087 SLAIN2Q9P270 581 aa19.47■□□□□ 0.71
HPS1-211ENST00000478087 PIK3R4Q99570 1358 aa19.46■□□□□ 0.71
HPS1-211ENST00000478087 C14orf37Q86TY3 774 aa19.46■□□□□ 0.71
HPS1-211ENST00000478087 PPLO60437 1756 aa19.44■□□□□ 0.7
HPS1-211ENST00000478087 XRN1Q8IZH2 1706 aaKnown RBP19.44■□□□□ 0.7
HPS1-211ENST00000478087 SETD5Q9C0A6 1442 aa19.42■□□□□ 0.7
HPS1-211ENST00000478087 SETD1AO15047 1707 aaKnown RBP19.42■□□□□ 0.7
HPS1-211ENST00000478087 RGL3Q3MIN7 710 aa19.41■□□□□ 0.7
HPS1-211ENST00000478087 C19orf44Q9H6X5 657 aa19.41■□□□□ 0.7
HPS1-211ENST00000478087 NCOA3Q9Y6Q9 1424 aa19.4■□□□□ 0.7
HPS1-211ENST00000478087 VGFO15240 615 aaPredicted RBP19.39■□□□□ 0.69
HPS1-211ENST00000478087 PHLPP1O60346 1717 aa19.39■□□□□ 0.69
HPS1-211ENST00000478087 RAB3GAP2Q9H2M9 1393 aa19.38■□□□□ 0.69
HPS1-211ENST00000478087 RPGRIP1LQ68CZ1 1315 aa19.37■□□□□ 0.69
HPS1-211ENST00000478087 ATF3P18847 181 aa19.37■□□□□ 0.69
HPS1-211ENST00000478087 CCDC144AA2RUR9 1427 aa19.36■□□□□ 0.69
HPS1-211ENST00000478087 ADGRF5Q8IZF2 1346 aa19.36■□□□□ 0.69
HPS1-211ENST00000478087 IFT172Q9UG01 1749 aa19.35■□□□□ 0.69
HPS1-211ENST00000478087 CADPS2Q86UW7 1296 aa19.35■□□□□ 0.69
HPS1-211ENST00000478087 SPATA31E1Q6ZUB1 1445 aa19.34■□□□□ 0.69
HPS1-211ENST00000478087 SOCS7O14512 581 aa19.34■□□□□ 0.69
HPS1-211ENST00000478087 NALCNQ8IZF0 1738 aa19.34■□□□□ 0.69
HPS1-211ENST00000478087 PHF23Q9BUL5 403 aaPredicted RBP19.33■□□□□ 0.68
HPS1-211ENST00000478087 RGS17Q9UGC6 210 aaPredicted RBP19.33■□□□□ 0.68
HPS1-211ENST00000478087 COL16A1Q07092 1604 aaPredicted RBP19.31■□□□□ 0.68
HPS1-211ENST00000478087 ROBO2Q9HCK4 1378 aa19.31■□□□□ 0.68
HPS1-211ENST00000478087 BRINP3Q76B58 766 aa19.3■□□□□ 0.68
HPS1-211ENST00000478087 DDX17Q92841 729 aaKnown RBP19.28■□□□□ 0.68
HPS1-211ENST00000478087 MST1RQ04912 1400 aa19.27■□□□□ 0.68
HPS1-211ENST00000478087 ADGRL3Q9HAR2 1447 aa19.27■□□□□ 0.68
HPS1-211ENST00000478087 TMEM132EQ6IEE7 984 aa19.27■□□□□ 0.68
HPS1-211ENST00000478087 STK26Q9P289 416 aa19.26■□□□□ 0.67
HPS1-211ENST00000478087 DCCP43146 1447 aa19.25■□□□□ 0.67
HPS1-211ENST00000478087 AHDC1Q5TGY3 1603 aaPredicted RBP19.25■□□□□ 0.67
HPS1-211ENST00000478087 ANKRD30BQ9BXX2 1392 aa19.23■□□□□ 0.67
HPS1-211ENST00000478087 JCADQ9P266 1359 aa19.23■□□□□ 0.67
HPS1-211ENST00000478087 WAPLQ7Z5K2 1190 aa19.23■□□□□ 0.67
HPS1-211ENST00000478087 ASXL1Q8IXJ9 1541 aa19.23■□□□□ 0.67
HPS1-211ENST00000478087 PTCH1Q13635 1447 aa19.23■□□□□ 0.67
HPS1-211ENST00000478087 ACIN1Q9UKV3 1341 aaKnown RBP19.22■□□□□ 0.67
HPS1-211ENST00000478087 POTEAQ6S8J7 498 aa19.21■□□□□ 0.67
HPS1-211ENST00000478087 NHSL1Q5SYE7 1610 aa19.21■□□□□ 0.67
HPS1-211ENST00000478087 PIK3C2GO75747 1445 aa19.2■□□□□ 0.66
HPS1-211ENST00000478087 ORAI2Q96SN7 254 aa19.2■□□□□ 0.66
HPS1-211ENST00000478087 CFAP70Q5T0N1 1121 aa19.19■□□□□ 0.66
HPS1-211ENST00000478087 C1orf167Q5SNV9 1468 aa19.19■□□□□ 0.66
HPS1-211ENST00000478087 PLEKHH1Q9ULM0 1364 aa19.19■□□□□ 0.66
HPS1-211ENST00000478087 LRP6O75581 1613 aa19.18■□□□□ 0.66
HPS1-211ENST00000478087 PRAG1Q86YV5 1406 aa19.18■□□□□ 0.66
HPS1-211ENST00000478087 SHPRHQ149N8 1683 aa19.18■□□□□ 0.66
HPS1-211ENST00000478087 C14orf93Q9H972 538 aaKnown RBP19.17■□□□□ 0.66
HPS1-211ENST00000478087 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
HPS1-211ENST00000478087 HRCP23327 699 aa19.16■□□□□ 0.66
HPS1-211ENST00000478087 KNDC1Q76NI1 1749 aa19.15■□□□□ 0.66
HPS1-211ENST00000478087 NUTM2FA1L443 756 aa19.15■□□□□ 0.66
HPS1-211ENST00000478087 NUTM2BA6NNL0 878 aaPredicted RBP19.15■□□□□ 0.66
HPS1-211ENST00000478087 NUTM2EB1AL46 878 aaPredicted RBP19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 104.8 ms