RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 RBM33Q96EV2 1170 aaKnown RBP18.12■□□□□ 0.49
CPSF7-211ENST00000477890 UNC13BO14795 1591 aa18.12■□□□□ 0.49
CPSF7-211ENST00000477890 FAM135BQ49AJ0 1406 aa18.11■□□□□ 0.49
CPSF7-211ENST00000477890 NWD1Q149M9 1564 aa18.11■□□□□ 0.49
CPSF7-211ENST00000477890 TMEM131LA2VDJ0 1609 aa18.1■□□□□ 0.49
CPSF7-211ENST00000477890 NKTRP30414 1462 aaKnown RBP18.1■□□□□ 0.49
CPSF7-211ENST00000477890 ZFYVE9O95405 1425 aa18.1■□□□□ 0.49
CPSF7-211ENST00000477890 RIMS2Q9UQ26 1411 aa18.09■□□□□ 0.49
CPSF7-211ENST00000477890 PPP1R15AO75807 674 aaPredicted RBP18.09■□□□□ 0.49
CPSF7-211ENST00000477890 E9PCH4 1651 aa18.09■□□□□ 0.49
CPSF7-211ENST00000477890 PLEKHG1Q9ULL1 1385 aa18.08■□□□□ 0.49
CPSF7-211ENST00000477890 HDGFP51858 240 aaKnown RBP18.08■□□□□ 0.48
CPSF7-211ENST00000477890 ROBO1Q9Y6N7 1651 aa18.08■□□□□ 0.48
CPSF7-211ENST00000477890 CHGAP10645 457 aaKnown RBP18.07■□□□□ 0.48
CPSF7-211ENST00000477890 CHD2O14647 1828 aaKnown RBP18.07■□□□□ 0.48
CPSF7-211ENST00000477890 ROCK1Q13464 1354 aa18.06■□□□□ 0.48
CPSF7-211ENST00000477890 MSH6P52701 1360 aa18.05■□□□□ 0.48
CPSF7-211ENST00000477890 IQGAP3Q86VI3 1631 aa18.05■□□□□ 0.48
CPSF7-211ENST00000477890 ITGAEP38570 1179 aa18.04■□□□□ 0.48
CPSF7-211ENST00000477890 NUTM2DQ5VT03 806 aaPredicted RBP18.03■□□□□ 0.48
CPSF7-211ENST00000477890 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.03■□□□□ 0.48
CPSF7-211ENST00000477890 NUP155O75694 1391 aa18.02■□□□□ 0.47
CPSF7-211ENST00000477890 RGS17Q9UGC6 210 aaPredicted RBP18.01■□□□□ 0.47
CPSF7-211ENST00000477890 TBX22Q9Y458 520 aa18.01■□□□□ 0.47
CPSF7-211ENST00000477890 PPARGC1BQ86YN6 1023 aaKnown RBP18■□□□□ 0.47
CPSF7-211ENST00000477890 SLAIN2Q9P270 581 aa17.99■□□□□ 0.47
CPSF7-211ENST00000477890 ADAMTS13Q76LX8 1427 aa17.98■□□□□ 0.47
CPSF7-211ENST00000477890 DIP2AQ14689 1571 aa17.98■□□□□ 0.47
CPSF7-211ENST00000477890 PHLPP1O60346 1717 aa17.98■□□□□ 0.47
CPSF7-211ENST00000477890 C14orf37Q86TY3 774 aa17.97■□□□□ 0.47
CPSF7-211ENST00000477890 NCOA3Q9Y6Q9 1424 aa17.95■□□□□ 0.46
CPSF7-211ENST00000477890 TRPM2O94759 1503 aa17.93■□□□□ 0.46
CPSF7-211ENST00000477890 PIK3R4Q99570 1358 aa17.93■□□□□ 0.46
CPSF7-211ENST00000477890 SPHKAPQ2M3C7 1700 aa17.93■□□□□ 0.46
CPSF7-211ENST00000477890 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.92■□□□□ 0.46
CPSF7-211ENST00000477890 JCADQ9P266 1359 aa17.91■□□□□ 0.46
CPSF7-211ENST00000477890 POTEAQ6S8J7 498 aa17.91■□□□□ 0.46
CPSF7-211ENST00000477890 ATF3P18847 181 aa17.9■□□□□ 0.46
CPSF7-211ENST00000477890 CADPS2Q86UW7 1296 aa17.9■□□□□ 0.46
CPSF7-211ENST00000477890 C19orf44Q9H6X5 657 aa17.9■□□□□ 0.46
CPSF7-211ENST00000477890 AMOTL2Q9Y2J4 779 aa17.9■□□□□ 0.46
CPSF7-211ENST00000477890 COL16A1Q07092 1604 aaPredicted RBP17.9■□□□□ 0.46
CPSF7-211ENST00000477890 PTPRUQ92729 1446 aa17.89■□□□□ 0.46
CPSF7-211ENST00000477890 ZNF326Q5BKZ1 582 aaKnown RBP17.89■□□□□ 0.45
CPSF7-211ENST00000477890 NRXN3Q9Y4C0 1643 aa17.88■□□□□ 0.45
CPSF7-211ENST00000477890 SETBP1Q9Y6X0 1596 aa17.86■□□□□ 0.45
CPSF7-211ENST00000477890 AHDC1Q5TGY3 1603 aaPredicted RBP17.85■□□□□ 0.45
CPSF7-211ENST00000477890 XRN1Q8IZH2 1706 aaKnown RBP17.85■□□□□ 0.45
CPSF7-211ENST00000477890 CLTCL1P53675 1640 aa17.84■□□□□ 0.45
CPSF7-211ENST00000477890 RRBP1Q9P2E9 1410 aaKnown RBP17.83■□□□□ 0.45
CPSF7-211ENST00000477890 SPATA31A6Q5VVP1 1343 aa17.82■□□□□ 0.44
CPSF7-211ENST00000477890 LRP6O75581 1613 aa17.82■□□□□ 0.44
CPSF7-211ENST00000477890 KIF1BO60333 1816 aa17.82■□□□□ 0.44
CPSF7-211ENST00000477890 DCCP43146 1447 aa17.81■□□□□ 0.44
CPSF7-211ENST00000477890 NAIPQ13075 1403 aa17.81■□□□□ 0.44
CPSF7-211ENST00000477890 METP08581 1390 aa17.81■□□□□ 0.44
CPSF7-211ENST00000477890 SHPRHQ149N8 1683 aa17.81■□□□□ 0.44
CPSF7-211ENST00000477890 MEX3CQ5U5Q3 659 aaKnown RBP17.81■□□□□ 0.44
CPSF7-211ENST00000477890 BRINP3Q76B58 766 aa17.81■□□□□ 0.44
CPSF7-211ENST00000477890 NEXMIFQ5QGS0 1516 aa17.81■□□□□ 0.44
CPSF7-211ENST00000477890 SETD1AO15047 1707 aaKnown RBP17.79■□□□□ 0.44
CPSF7-211ENST00000477890 ASXL1Q8IXJ9 1541 aa17.77■□□□□ 0.44
CPSF7-211ENST00000477890 TRIM52Q96A61 297 aa17.77■□□□□ 0.44
CPSF7-211ENST00000477890 MST1RQ04912 1400 aa17.77■□□□□ 0.44
CPSF7-211ENST00000477890 ADGRL3Q9HAR2 1447 aa17.75■□□□□ 0.43
CPSF7-211ENST00000477890 NALCNQ8IZF0 1738 aa17.75■□□□□ 0.43
CPSF7-211ENST00000477890 NHSL1Q5SYE7 1610 aa17.74■□□□□ 0.43
CPSF7-211ENST00000477890 ZNF772Q68DY9 489 aaPredicted RBP17.74■□□□□ 0.43
CPSF7-211ENST00000477890 NUTM2BA6NNL0 878 aaPredicted RBP17.73■□□□□ 0.43
CPSF7-211ENST00000477890 NUTM2EB1AL46 878 aaPredicted RBP17.73■□□□□ 0.43
CPSF7-211ENST00000477890 NUTM2AQ8IVF1 878 aaPredicted RBP17.73■□□□□ 0.43
CPSF7-211ENST00000477890 HFM1A2PYH4 1435 aa17.72■□□□□ 0.43
CPSF7-211ENST00000477890 SETD5Q9C0A6 1442 aa17.72■□□□□ 0.43
CPSF7-211ENST00000477890 VGFO15240 615 aaPredicted RBP17.71■□□□□ 0.43
CPSF7-211ENST00000477890 SLC4A1APQ9BWU0 796 aaKnown RBP17.71■□□□□ 0.43
CPSF7-211ENST00000477890 DDX17Q92841 729 aaKnown RBP17.7■□□□□ 0.42
CPSF7-211ENST00000477890 LRRC59Q96AG4 307 aaKnown RBP17.69■□□□□ 0.42
CPSF7-211ENST00000477890 PTCH1Q13635 1447 aa17.68■□□□□ 0.42
CPSF7-211ENST00000477890 PPLO60437 1756 aa17.68■□□□□ 0.42
CPSF7-211ENST00000477890 RPGRIP1LQ68CZ1 1315 aa17.68■□□□□ 0.42
CPSF7-211ENST00000477890 ROBO2Q9HCK4 1378 aa17.66■□□□□ 0.42
CPSF7-211ENST00000477890 C1orf167Q5SNV9 1468 aa17.66■□□□□ 0.42
CPSF7-211ENST00000477890 AFF2P51816 1311 aa17.66■□□□□ 0.42
CPSF7-211ENST00000477890 RXRBP28702 533 aa17.65■□□□□ 0.42
CPSF7-211ENST00000477890 PNPLA6Q8IY17 1366 aa17.65■□□□□ 0.42
CPSF7-211ENST00000477890 FOXD1Q16676 465 aa17.64■□□□□ 0.41
CPSF7-211ENST00000477890 PRAG1Q86YV5 1406 aa17.63■□□□□ 0.41
CPSF7-211ENST00000477890 C8orf37Q96NL8 207 aa17.62■□□□□ 0.41
CPSF7-211ENST00000477890 ORAI2Q96SN7 254 aa17.62■□□□□ 0.41
CPSF7-211ENST00000477890 UPF1Q92900 1129 aaKnown RBP eCLIP17.61■□□□□ 0.41
CPSF7-211ENST00000477890 LAMC1P11047 1609 aa17.61■□□□□ 0.41
CPSF7-211ENST00000477890 CCDC144AA2RUR9 1427 aa17.6■□□□□ 0.41
CPSF7-211ENST00000477890 CDK12Q9NYV4 1490 aaPredicted RBP17.59■□□□□ 0.41
CPSF7-211ENST00000477890 SOS2Q07890 1332 aaPredicted RBP17.58■□□□□ 0.4
CPSF7-211ENST00000477890 ADAMTS2O95450 1211 aa17.58■□□□□ 0.4
CPSF7-211ENST00000477890 RGL3Q3MIN7 710 aa17.58■□□□□ 0.4
CPSF7-211ENST00000477890 ADGRF5Q8IZF2 1346 aa17.57■□□□□ 0.4
CPSF7-211ENST00000477890 QTRT2Q9H974 415 aaKnown RBP17.57■□□□□ 0.4
CPSF7-211ENST00000477890 NGLY1Q96IV0 654 aa17.56■□□□□ 0.4
CPSF7-211ENST00000477890 IFT172Q9UG01 1749 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms