RNA–Protein interactions for RNA: ENST00000477772.1

COL11A2-206, Transcript of collagen type XI alpha 2 chain, humanhuman

TSL 2

Gene COL11A2, Length 1,984 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A2-206ENST00000477772 THEMISQ8N1K5 641 aaPredicted RBP23.07■■□□□ 1.28
COL11A2-206ENST00000477772 HSPA2P54652 639 aa23.05■■□□□ 1.28
COL11A2-206ENST00000477772 ZNF326Q5BKZ1 582 aaKnown RBP23.05■■□□□ 1.28
COL11A2-206ENST00000477772 TMEM2Q9UHN6 1383 aa23.04■■□□□ 1.28
COL11A2-206ENST00000477772 ARHGAP23Q9P227 1491 aa23.04■■□□□ 1.28
COL11A2-206ENST00000477772 SLIT1O75093 1534 aa23.03■■□□□ 1.28
COL11A2-206ENST00000477772 GTF3C3Q9Y5Q9 886 aa23.03■■□□□ 1.28
COL11A2-206ENST00000477772 NEXMIFQ5QGS0 1516 aa23.03■■□□□ 1.28
COL11A2-206ENST00000477772 ZFYVE9O95405 1425 aa23.02■■□□□ 1.28
COL11A2-206ENST00000477772 PELP1Q8IZL8 1130 aaKnown RBP23.02■■□□□ 1.28
COL11A2-206ENST00000477772 IFT172Q9UG01 1749 aa23.01■■□□□ 1.27
COL11A2-206ENST00000477772 RIMS2Q9UQ26 1411 aa23.01■■□□□ 1.27
COL11A2-206ENST00000477772 PPLO60437 1756 aa23.01■■□□□ 1.27
COL11A2-206ENST00000477772 LTKP29376 864 aa23■■□□□ 1.27
COL11A2-206ENST00000477772 NUTM2DQ5VT03 806 aaPredicted RBP23■■□□□ 1.27
COL11A2-206ENST00000477772 L3MBTL2Q969R5 705 aa22.99■■□□□ 1.27
COL11A2-206ENST00000477772 RPGRIP1LQ68CZ1 1315 aa22.98■■□□□ 1.27
COL11A2-206ENST00000477772 TXNDC2Q86VQ3 553 aa22.96■■□□□ 1.27
COL11A2-206ENST00000477772 DCAF11Q8TEB1 546 aa22.96■■□□□ 1.27
COL11A2-206ENST00000477772 TONSLQ96HA7 1378 aa22.95■■□□□ 1.26
COL11A2-206ENST00000477772 YTHDC1Q96MU7 727 aaKnown RBP22.94■■□□□ 1.26
COL11A2-206ENST00000477772 STRCQ7RTU9 1775 aa22.94■■□□□ 1.26
COL11A2-206ENST00000477772 SCAF11Q99590 1463 aaKnown RBP22.94■■□□□ 1.26
COL11A2-206ENST00000477772 POLR1AO95602 1720 aaPredicted RBP22.93■■□□□ 1.26
COL11A2-206ENST00000477772 ANKLE2Q86XL3 938 aa22.93■■□□□ 1.26
COL11A2-206ENST00000477772 NCKAP5LQ9HCH0 1330 aa22.93■■□□□ 1.26
COL11A2-206ENST00000477772 KDM2AQ9Y2K7 1162 aa22.92■■□□□ 1.26
COL11A2-206ENST00000477772 EID1Q9Y6B2 187 aa22.92■■□□□ 1.26
COL11A2-206ENST00000477772 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.92■■□□□ 1.26
COL11A2-206ENST00000477772 ADGRF5Q8IZF2 1346 aa22.92■■□□□ 1.26
COL11A2-206ENST00000477772 HDGFP51858 240 aaKnown RBP22.9■■□□□ 1.26
COL11A2-206ENST00000477772 SENP3Q9H4L4 574 aaPredicted RBP22.9■■□□□ 1.26
COL11A2-206ENST00000477772 MYOM2P54296 1465 aa22.9■■□□□ 1.26
COL11A2-206ENST00000477772 VGFO15240 615 aaPredicted RBP22.9■■□□□ 1.26
COL11A2-206ENST00000477772 PPP1R15AO75807 674 aaPredicted RBP22.89■■□□□ 1.26
COL11A2-206ENST00000477772 NRXN1Q9ULB1 1477 aa22.88■■□□□ 1.25
COL11A2-206ENST00000477772 MED14O60244 1454 aa22.87■■□□□ 1.25
COL11A2-206ENST00000477772 PLEKHG1Q9ULL1 1385 aa22.86■■□□□ 1.25
COL11A2-206ENST00000477772 NRXN3Q9Y4C0 1643 aa22.85■■□□□ 1.25
COL11A2-206ENST00000477772 STAC3Q96MF2 364 aa22.85■■□□□ 1.25
COL11A2-206ENST00000477772 PIK3C2GO75747 1445 aa22.84■■□□□ 1.25
COL11A2-206ENST00000477772 IQGAP1P46940 1657 aa22.84■■□□□ 1.25
COL11A2-206ENST00000477772 NPHP4O75161 1426 aaPredicted RBP22.83■■□□□ 1.25
COL11A2-206ENST00000477772 PRAG1Q86YV5 1406 aa22.83■■□□□ 1.25
COL11A2-206ENST00000477772 SETBP1Q9Y6X0 1596 aa22.83■■□□□ 1.25
COL11A2-206ENST00000477772 NBPF8Q3BBV2 869 aa22.81■■□□□ 1.24
COL11A2-206ENST00000477772 ADAMTS13Q76LX8 1427 aa22.81■■□□□ 1.24
COL11A2-206ENST00000477772 BCANQ96GW7 911 aa22.8■■□□□ 1.24
COL11A2-206ENST00000477772 SLC26A8Q96RN1 970 aa22.8■■□□□ 1.24
COL11A2-206ENST00000477772 SETD1AO15047 1707 aaKnown RBP22.78■■□□□ 1.24
COL11A2-206ENST00000477772 ALKQ9UM73 1620 aa22.78■■□□□ 1.24
COL11A2-206ENST00000477772 CFAP70Q5T0N1 1121 aa22.78■■□□□ 1.24
COL11A2-206ENST00000477772 C14orf93Q9H972 538 aaKnown RBP22.76■■□□□ 1.23
COL11A2-206ENST00000477772 TRPM1Q7Z4N2 1603 aa22.74■■□□□ 1.23
COL11A2-206ENST00000477772 TBX22Q9Y458 520 aa22.74■■□□□ 1.23
COL11A2-206ENST00000477772 KCNA4P22459 653 aa22.73■■□□□ 1.23
COL11A2-206ENST00000477772 DIP2AQ14689 1571 aa22.73■■□□□ 1.23
COL11A2-206ENST00000477772 KIAA1210Q9ULL0 1709 aa22.73■■□□□ 1.23
COL11A2-206ENST00000477772 METP08581 1390 aa22.72■■□□□ 1.23
COL11A2-206ENST00000477772 ASXL1Q8IXJ9 1541 aa22.72■■□□□ 1.23
COL11A2-206ENST00000477772 LAMC1P11047 1609 aa22.72■■□□□ 1.23
COL11A2-206ENST00000477772 NBPF1Q3BBV0 1214 aa22.72■■□□□ 1.23
COL11A2-206ENST00000477772 TMEM132EQ6IEE7 984 aa22.7■■□□□ 1.23
COL11A2-206ENST00000477772 DMRT2Q9Y5R5 561 aa22.7■■□□□ 1.23
COL11A2-206ENST00000477772 ADGRB1O14514 1584 aa22.69■■□□□ 1.22
COL11A2-206ENST00000477772 RTN4Q9NQC3 1192 aaKnown RBP22.69■■□□□ 1.22
COL11A2-206ENST00000477772 RALGAPBQ86X10 1494 aa22.67■■□□□ 1.22
COL11A2-206ENST00000477772 PTPRUQ92729 1446 aa22.67■■□□□ 1.22
COL11A2-206ENST00000477772 CHD2O14647 1828 aaKnown RBP22.66■■□□□ 1.22
COL11A2-206ENST00000477772 PIK3R4Q99570 1358 aa22.64■■□□□ 1.21
COL11A2-206ENST00000477772 STRCP1A6NGW2 1772 aa22.63■■□□□ 1.21
COL11A2-206ENST00000477772 ROCK2O75116 1388 aaKnown RBP22.63■■□□□ 1.21
COL11A2-206ENST00000477772 GPRASP1Q5JY77 1395 aa22.62■■□□□ 1.21
COL11A2-206ENST00000477772 YTHDC2Q9H6S0 1430 aaKnown RBP22.62■■□□□ 1.21
COL11A2-206ENST00000477772 AMOTL2Q9Y2J4 779 aa22.61■■□□□ 1.21
COL11A2-206ENST00000477772 ZNF335Q9H4Z2 1342 aaPredicted RBP22.61■■□□□ 1.21
COL11A2-206ENST00000477772 XRN1Q8IZH2 1706 aaKnown RBP22.6■■□□□ 1.21
COL11A2-206ENST00000477772 STK26Q9P289 416 aa22.6■■□□□ 1.21
COL11A2-206ENST00000477772 NWD1Q149M9 1564 aa22.59■■□□□ 1.21
COL11A2-206ENST00000477772 LRPPRCP42704 1394 aaKnown RBP22.59■■□□□ 1.21
COL11A2-206ENST00000477772 KCNA6P17658 529 aa22.59■■□□□ 1.21
COL11A2-206ENST00000477772 CARD11Q9BXL7 1154 aa22.58■■□□□ 1.2
COL11A2-206ENST00000477772 ABCC11Q96J66 1382 aa22.57■■□□□ 1.2
COL11A2-206ENST00000477772 DDX10Q13206 875 aaKnown RBP22.56■■□□□ 1.2
COL11A2-206ENST00000477772 TRAK1Q9UPV9 953 aa22.56■■□□□ 1.2
COL11A2-206ENST00000477772 KNDC1Q76NI1 1749 aa22.56■■□□□ 1.2
COL11A2-206ENST00000477772 TECPR2O15040 1411 aa22.56■■□□□ 1.2
COL11A2-206ENST00000477772 ROBO2Q9HCK4 1378 aa22.54■■□□□ 1.2
COL11A2-206ENST00000477772 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
COL11A2-206ENST00000477772 CPS1P31327 1500 aa22.53■■□□□ 1.2
COL11A2-206ENST00000477772 DLC1Q96QB1 1528 aa22.51■■□□□ 1.19
COL11A2-206ENST00000477772 NKTRP30414 1462 aaKnown RBP22.51■■□□□ 1.19
COL11A2-206ENST00000477772 LTBP4Q8N2S1 1624 aa22.51■■□□□ 1.19
COL11A2-206ENST00000477772 PTCH1Q13635 1447 aa22.51■■□□□ 1.19
COL11A2-206ENST00000477772 CCER2I3L3R5 266 aa22.5■■□□□ 1.19
COL11A2-206ENST00000477772 WAPLQ7Z5K2 1190 aa22.5■■□□□ 1.19
COL11A2-206ENST00000477772 RBM33Q96EV2 1170 aaKnown RBP22.5■■□□□ 1.19
COL11A2-206ENST00000477772 PLEKHH1Q9ULM0 1364 aa22.5■■□□□ 1.19
COL11A2-206ENST00000477772 SIRT1Q96EB6 747 aa22.48■■□□□ 1.19
COL11A2-206ENST00000477772 PRAM1Q96QH2 718 aa22.48■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms