RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 COL16A1Q07092 1604 aaPredicted RBP31.92■■■□□ 2.7
PDLIM1-202ENST00000477757 SLAIN2Q9P270 581 aa31.91■■■□□ 2.7
PDLIM1-202ENST00000477757 ZFYVE9O95405 1425 aa31.91■■■□□ 2.7
PDLIM1-202ENST00000477757 SLC52A1Q9NWF4 448 aa31.89■■■□□ 2.7
PDLIM1-202ENST00000477757 PLEKHG1Q9ULL1 1385 aa31.88■■■□□ 2.69
PDLIM1-202ENST00000477757 RPRD2Q5VT52 1461 aaKnown RBP31.88■■■□□ 2.69
PDLIM1-202ENST00000477757 CHD2O14647 1828 aaKnown RBP31.88■■■□□ 2.69
PDLIM1-202ENST00000477757 ADGRL2O95490 1459 aa31.84■■■□□ 2.69
PDLIM1-202ENST00000477757 LRP6O75581 1613 aa31.83■■■□□ 2.69
PDLIM1-202ENST00000477757 BCANQ96GW7 911 aa31.83■■■□□ 2.69
PDLIM1-202ENST00000477757 GCC2Q8IWJ2 1684 aa31.83■■■□□ 2.69
PDLIM1-202ENST00000477757 MYO5BQ9ULV0 1848 aa31.82■■■□□ 2.68
PDLIM1-202ENST00000477757 CHIC2Q9UKJ5 165 aa31.82■■■□□ 2.68
PDLIM1-202ENST00000477757 NCOA3Q9Y6Q9 1424 aa31.82■■■□□ 2.68
PDLIM1-202ENST00000477757 TMEM131LA2VDJ0 1609 aa31.8■■■□□ 2.68
PDLIM1-202ENST00000477757 RIMS2Q9UQ26 1411 aa31.8■■■□□ 2.68
PDLIM1-202ENST00000477757 LOC105371045A0A1W2PR82 267 aa31.78■■■□□ 2.68
PDLIM1-202ENST00000477757 AHDC1Q5TGY3 1603 aaPredicted RBP31.78■■■□□ 2.68
PDLIM1-202ENST00000477757 SPATA31A6Q5VVP1 1343 aa31.77■■■□□ 2.68
PDLIM1-202ENST00000477757 SHPRHQ149N8 1683 aa31.76■■■□□ 2.67
PDLIM1-202ENST00000477757 DIP2AQ14689 1571 aa31.74■■■□□ 2.67
PDLIM1-202ENST00000477757 PPP1R15AO75807 674 aaPredicted RBP31.74■■■□□ 2.67
PDLIM1-202ENST00000477757 TBX22Q9Y458 520 aa31.72■■■□□ 2.67
PDLIM1-202ENST00000477757 ANKRD50Q9ULJ7 1429 aa31.71■■■□□ 2.67
PDLIM1-202ENST00000477757 SIPA1L2Q9P2F8 1722 aaPredicted RBP31.71■■■□□ 2.67
PDLIM1-202ENST00000477757 HDGFP51858 240 aaKnown RBP31.7■■■□□ 2.67
PDLIM1-202ENST00000477757 ADAMTS13Q76LX8 1427 aa31.69■■■□□ 2.66
PDLIM1-202ENST00000477757 APLP2Q06481 763 aa31.69■■■□□ 2.66
PDLIM1-202ENST00000477757 ZNF772Q68DY9 489 aaPredicted RBP31.69■■■□□ 2.66
PDLIM1-202ENST00000477757 MEX3CQ5U5Q3 659 aaKnown RBP31.67■■■□□ 2.66
PDLIM1-202ENST00000477757 UPF1Q92900 1129 aaKnown RBP eCLIP31.67■■■□□ 2.66
PDLIM1-202ENST00000477757 PIK3R4Q99570 1358 aa31.67■■■□□ 2.66
PDLIM1-202ENST00000477757 C14orf37Q86TY3 774 aa31.66■■■□□ 2.66
PDLIM1-202ENST00000477757 CADPS2Q86UW7 1296 aa31.66■■■□□ 2.66
PDLIM1-202ENST00000477757 UNC13BO14795 1591 aa31.65■■■□□ 2.66
PDLIM1-202ENST00000477757 ABCF1Q8NE71 845 aaKnown RBP eCLIP31.64■■■□□ 2.66
PDLIM1-202ENST00000477757 C19orf44Q9H6X5 657 aa31.63■■■□□ 2.65
PDLIM1-202ENST00000477757 TRIM52Q96A61 297 aa31.61■■■□□ 2.65
PDLIM1-202ENST00000477757 TRPM2O94759 1503 aa31.6■■■□□ 2.65
PDLIM1-202ENST00000477757 CDK12Q9NYV4 1490 aaPredicted RBP31.6■■■□□ 2.65
PDLIM1-202ENST00000477757 ATF3P18847 181 aa31.6■■■□□ 2.65
PDLIM1-202ENST00000477757 E9PCH4 1651 aa31.59■■■□□ 2.65
PDLIM1-202ENST00000477757 DCCP43146 1447 aa31.57■■■□□ 2.64
PDLIM1-202ENST00000477757 CHGAP10645 457 aaKnown RBP31.54■■■□□ 2.64
PDLIM1-202ENST00000477757 BRINP3Q76B58 766 aa31.54■■■□□ 2.64
PDLIM1-202ENST00000477757 ASXL1Q8IXJ9 1541 aa31.54■■■□□ 2.64
PDLIM1-202ENST00000477757 PTPRUQ92729 1446 aa31.53■■■□□ 2.64
PDLIM1-202ENST00000477757 RXRBP28702 533 aa31.53■■■□□ 2.64
PDLIM1-202ENST00000477757 NUTM2DQ5VT03 806 aaPredicted RBP31.52■■■□□ 2.64
PDLIM1-202ENST00000477757 XRN1Q8IZH2 1706 aaKnown RBP31.52■■■□□ 2.64
PDLIM1-202ENST00000477757 IQGAP3Q86VI3 1631 aa31.51■■■□□ 2.63
PDLIM1-202ENST00000477757 FAM50AQ14320 339 aaKnown RBP31.51■■■□□ 2.63
PDLIM1-202ENST00000477757 SETD5Q9C0A6 1442 aa31.49■■■□□ 2.63
PDLIM1-202ENST00000477757 NHSL1Q5SYE7 1610 aa31.49■■■□□ 2.63
PDLIM1-202ENST00000477757 AMOTL2Q9Y2J4 779 aa31.48■■■□□ 2.63
PDLIM1-202ENST00000477757 NRXN3Q9Y4C0 1643 aa31.46■■■□□ 2.63
PDLIM1-202ENST00000477757 NUTM2BA6NNL0 878 aaPredicted RBP31.45■■■□□ 2.63
PDLIM1-202ENST00000477757 NUTM2EB1AL46 878 aaPredicted RBP31.45■■■□□ 2.63
PDLIM1-202ENST00000477757 MST1RQ04912 1400 aa31.45■■■□□ 2.63
PDLIM1-202ENST00000477757 NUTM2AQ8IVF1 878 aaPredicted RBP31.45■■■□□ 2.63
PDLIM1-202ENST00000477757 AFF2P51816 1311 aa31.45■■■□□ 2.62
PDLIM1-202ENST00000477757 SETBP1Q9Y6X0 1596 aa31.44■■■□□ 2.62
PDLIM1-202ENST00000477757 RGS12O14924 1447 aa31.41■■■□□ 2.62
PDLIM1-202ENST00000477757 ROCK1Q13464 1354 aa31.39■■■□□ 2.62
PDLIM1-202ENST00000477757 SRCAPQ6ZRS2 3230 aa31.36■■■□□ 2.61
PDLIM1-202ENST00000477757 PNPLA6Q8IY17 1366 aa31.35■■■□□ 2.61
PDLIM1-202ENST00000477757 ADGRL3Q9HAR2 1447 aa31.34■■■□□ 2.61
PDLIM1-202ENST00000477757 LRRC59Q96AG4 307 aaKnown RBP31.34■■■□□ 2.61
PDLIM1-202ENST00000477757 NALCNQ8IZF0 1738 aa31.32■■■□□ 2.6
PDLIM1-202ENST00000477757 NUP155O75694 1391 aa31.3■■■□□ 2.6
PDLIM1-202ENST00000477757 RBM6P78332 1123 aaKnown RBP31.3■■■□□ 2.6
PDLIM1-202ENST00000477757 C8orf37Q96NL8 207 aa31.3■■■□□ 2.6
PDLIM1-202ENST00000477757 METP08581 1390 aa31.3■■■□□ 2.6
PDLIM1-202ENST00000477757 SPHKAPQ2M3C7 1700 aa31.29■■■□□ 2.6
PDLIM1-202ENST00000477757 LAMC1P11047 1609 aa31.27■■■□□ 2.6
PDLIM1-202ENST00000477757 QTRT2Q9H974 415 aaKnown RBP31.26■■■□□ 2.59
PDLIM1-202ENST00000477757 DDX17Q92841 729 aaKnown RBP31.24■■■□□ 2.59
PDLIM1-202ENST00000477757 NEXMIFQ5QGS0 1516 aa31.21■■■□□ 2.59
PDLIM1-202ENST00000477757 C1orf167Q5SNV9 1468 aa31.2■■■□□ 2.58
PDLIM1-202ENST00000477757 ZNF326Q5BKZ1 582 aaKnown RBP31.18■■■□□ 2.58
PDLIM1-202ENST00000477757 ATAD2Q6PL18 1390 aa31.17■■■□□ 2.58
PDLIM1-202ENST00000477757 NGLY1Q96IV0 654 aa31.16■■■□□ 2.58
PDLIM1-202ENST00000477757 CLTCL1P53675 1640 aa31.16■■■□□ 2.58
PDLIM1-202ENST00000477757 PTCH1Q13635 1447 aa31.15■■■□□ 2.58
PDLIM1-202ENST00000477757 ADAMTS2O95450 1211 aa31.14■■■□□ 2.58
PDLIM1-202ENST00000477757 SOS2Q07890 1332 aaPredicted RBP31.11■■■□□ 2.57
PDLIM1-202ENST00000477757 EP400Q96L91 3159 aa31.11■■■□□ 2.57
PDLIM1-202ENST00000477757 COL22A1Q8NFW1 1626 aaPredicted RBP31.1■■■□□ 2.57
PDLIM1-202ENST00000477757 PRAG1Q86YV5 1406 aa31.1■■■□□ 2.57
PDLIM1-202ENST00000477757 USP21Q9UK80 565 aa31.07■■■□□ 2.56
PDLIM1-202ENST00000477757 ATRNO75882 1429 aa31.07■■■□□ 2.56
PDLIM1-202ENST00000477757 TRPC5Q9UL62 973 aaPredicted RBP31.06■■■□□ 2.56
PDLIM1-202ENST00000477757 ROBO2Q9HCK4 1378 aa31.05■■■□□ 2.56
PDLIM1-202ENST00000477757 FNBP4Q8N3X1 1017 aaPredicted RBP31.04■■■□□ 2.56
PDLIM1-202ENST00000477757 KIF1BO60333 1816 aa31.03■■■□□ 2.56
PDLIM1-202ENST00000477757 ORAI2Q96SN7 254 aa31.03■■■□□ 2.56
PDLIM1-202ENST00000477757 MYOM2P54296 1465 aa31.01■■■□□ 2.56
PDLIM1-202ENST00000477757 ITGAEP38570 1179 aa31.01■■■□□ 2.55
PDLIM1-202ENST00000477757 FOXD1Q16676 465 aa30.98■■■□□ 2.55
PDLIM1-202ENST00000477757 HFM1A2PYH4 1435 aa30.97■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms