RNA–Protein interactions for RNA: ENST00000477537.1

HLA-DMB-260, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 1,919 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-260ENST00000477537 MYBBP1AQ9BQG0 1328 aaKnown RBP14.98□□□□□ -0.01
HLA-DMB-260ENST00000477537 TMC1Q8TDI8 760 aa14.98□□□□□ -0.01
HLA-DMB-260ENST00000477537 PNISRQ8TF01 805 aaKnown RBP14.96□□□□□ -0.01
HLA-DMB-260ENST00000477537 BRD4O60885 1362 aaPredicted RBP14.96□□□□□ -0.01
HLA-DMB-260ENST00000477537 KIAA1210Q9ULL0 1709 aa14.96□□□□□ -0.01
HLA-DMB-260ENST00000477537 SCAF11Q99590 1463 aaKnown RBP14.96□□□□□ -0.01
HLA-DMB-260ENST00000477537 SIGLEC1Q9BZZ2 1709 aa14.96□□□□□ -0.02
HLA-DMB-260ENST00000477537 PER1O15534 1290 aaPredicted RBP14.95□□□□□ -0.02
HLA-DMB-260ENST00000477537 MROH2AA6NES4 1674 aa14.95□□□□□ -0.02
HLA-DMB-260ENST00000477537 PARD3Q8TEW0 1356 aa14.94□□□□□ -0.02
HLA-DMB-260ENST00000477537 GGT6Q6P531 493 aa14.94□□□□□ -0.02
HLA-DMB-260ENST00000477537 PANK3Q9H999 370 aa14.94□□□□□ -0.02
HLA-DMB-260ENST00000477537 CFAP65Q6ZU64 1925 aaKnown RBP14.94□□□□□ -0.02
HLA-DMB-260ENST00000477537 MYOM2P54296 1465 aa14.94□□□□□ -0.02
HLA-DMB-260ENST00000477537 IFT172Q9UG01 1749 aa14.94□□□□□ -0.02
HLA-DMB-260ENST00000477537 ARHGEF40Q8TER5 1519 aa14.93□□□□□ -0.02
HLA-DMB-260ENST00000477537 IRX6P78412 446 aaPredicted RBP14.92□□□□□ -0.02
HLA-DMB-260ENST00000477537 WASHC2CQ9Y4E1 1318 aa14.91□□□□□ -0.02
HLA-DMB-260ENST00000477537 NPATQ14207 1427 aa14.91□□□□□ -0.02
HLA-DMB-260ENST00000477537 NLRP13Q86W25 1043 aa14.91□□□□□ -0.02
HLA-DMB-260ENST00000477537 ADGRF5Q8IZF2 1346 aa14.91□□□□□ -0.02
HLA-DMB-260ENST00000477537 ABCC3O15438 1527 aa14.91□□□□□ -0.02
HLA-DMB-260ENST00000477537 LRPPRCP42704 1394 aaKnown RBP14.91□□□□□ -0.02
HLA-DMB-260ENST00000477537 EIF3AQ14152 1382 aaKnown RBP14.91□□□□□ -0.02
HLA-DMB-260ENST00000477537 CC2D1BQ5T0F9 858 aaKnown RBP14.9□□□□□ -0.02
HLA-DMB-260ENST00000477537 ADGRB3O60242 1522 aa14.9□□□□□ -0.02
HLA-DMB-260ENST00000477537 CHGAP10645 457 aaKnown RBP14.9□□□□□ -0.02
HLA-DMB-260ENST00000477537 CFAP70Q5T0N1 1121 aa14.9□□□□□ -0.02
HLA-DMB-260ENST00000477537 CAMSAP1Q5T5Y3 1602 aa14.88□□□□□ -0.03
HLA-DMB-260ENST00000477537 CDCA8Q53HL2 280 aa14.88□□□□□ -0.03
HLA-DMB-260ENST00000477537 SMG6Q86US8 1419 aaKnown RBP14.88□□□□□ -0.03
HLA-DMB-260ENST00000477537 NRXN1Q9ULB1 1477 aa14.87□□□□□ -0.03
HLA-DMB-260ENST00000477537 SENP3-EIF4A1A0A087X0R7 540 aa14.87□□□□□ -0.03
HLA-DMB-260ENST00000477537 TSHZ2Q9NRE2 1034 aa14.87□□□□□ -0.03
HLA-DMB-260ENST00000477537 NOS1P29475 1434 aa14.87□□□□□ -0.03
HLA-DMB-260ENST00000477537 SYNMO15061 1565 aa14.86□□□□□ -0.03
HLA-DMB-260ENST00000477537 MLECQ14165 292 aa14.86□□□□□ -0.03
HLA-DMB-260ENST00000477537 PPLO60437 1756 aa14.86□□□□□ -0.03
HLA-DMB-260ENST00000477537 NUDCQ9Y266 331 aa14.85□□□□□ -0.03
HLA-DMB-260ENST00000477537 ERICH6BQ5W0A0 696 aa14.84□□□□□ -0.03
HLA-DMB-260ENST00000477537 KDM5AP29375 1690 aaKnown RBP14.84□□□□□ -0.03
HLA-DMB-260ENST00000477537 MYOM1P52179 1685 aa14.83□□□□□ -0.03
HLA-DMB-260ENST00000477537 REREQ9P2R6 1566 aa14.83□□□□□ -0.04
HLA-DMB-260ENST00000477537 KNSTRNQ9Y448 316 aa14.83□□□□□ -0.04
HLA-DMB-260ENST00000477537 ZC3H13Q5T200 1668 aaKnown RBP14.82□□□□□ -0.04
HLA-DMB-260ENST00000477537 SETBP1Q9Y6X0 1596 aa14.81□□□□□ -0.04
HLA-DMB-260ENST00000477537 MYO3AQ8NEV4 1616 aa14.81□□□□□ -0.04
HLA-DMB-260ENST00000477537 ERVK-7P63135 1459 aa14.81□□□□□ -0.04
HLA-DMB-260ENST00000477537 RPGRIP1LQ68CZ1 1315 aa14.81□□□□□ -0.04
HLA-DMB-260ENST00000477537 PIK3C2GO75747 1445 aa14.8□□□□□ -0.04
HLA-DMB-260ENST00000477537 SLC24A1O60721 1099 aa14.8□□□□□ -0.04
HLA-DMB-260ENST00000477537 PIK3C2BO00750 1634 aa14.8□□□□□ -0.04
HLA-DMB-260ENST00000477537 AGLP35573 1532 aa14.79□□□□□ -0.04
HLA-DMB-260ENST00000477537 ASXL1Q8IXJ9 1541 aa14.79□□□□□ -0.04
HLA-DMB-260ENST00000477537 AMER1Q5JTC6 1135 aaPredicted RBP14.79□□□□□ -0.04
HLA-DMB-260ENST00000477537 C14orf93Q9H972 538 aaKnown RBP14.79□□□□□ -0.04
HLA-DMB-260ENST00000477537 PPP4R2Q9NY27 417 aa14.79□□□□□ -0.04
HLA-DMB-260ENST00000477537 ARHGAP31Q2M1Z3 1444 aa14.79□□□□□ -0.04
HLA-DMB-260ENST00000477537 CENPJQ9HC77 1338 aaPredicted RBP14.77□□□□□ -0.05
HLA-DMB-260ENST00000477537 PPP2R1AP30153 589 aa14.76□□□□□ -0.05
HLA-DMB-260ENST00000477537 ADGRB1O14514 1584 aa14.76□□□□□ -0.05
HLA-DMB-260ENST00000477537 INSRP06213 1382 aa14.76□□□□□ -0.05
HLA-DMB-260ENST00000477537 TRAK1Q9UPV9 953 aa14.76□□□□□ -0.05
HLA-DMB-260ENST00000477537 SALL2Q9Y467 1007 aaPredicted RBP14.76□□□□□ -0.05
HLA-DMB-260ENST00000477537 BLMP54132 1417 aaPredicted RBP14.76□□□□□ -0.05
HLA-DMB-260ENST00000477537 SBNO2Q9Y2G9 1366 aa14.75□□□□□ -0.05
HLA-DMB-260ENST00000477537 CLTCQ00610 1675 aaKnown RBP14.75□□□□□ -0.05
HLA-DMB-260ENST00000477537 QRICH2Q9H0J4 1663 aa14.75□□□□□ -0.05
HLA-DMB-260ENST00000477537 NEXMIFQ5QGS0 1516 aa14.75□□□□□ -0.05
HLA-DMB-260ENST00000477537 NUTM2DQ5VT03 806 aaPredicted RBP14.74□□□□□ -0.05
HLA-DMB-260ENST00000477537 TMEM132EQ6IEE7 984 aa14.74□□□□□ -0.05
HLA-DMB-260ENST00000477537 RNF123Q5XPI4 1314 aa14.74□□□□□ -0.05
HLA-DMB-260ENST00000477537 NPC1L1Q9UHC9 1359 aa14.74□□□□□ -0.05
HLA-DMB-260ENST00000477537 PREX1Q8TCU6 1659 aa14.74□□□□□ -0.05
HLA-DMB-260ENST00000477537 IDI1Q13907 227 aa14.73□□□□□ -0.05
HLA-DMB-260ENST00000477537 VGFO15240 615 aaPredicted RBP14.72□□□□□ -0.05
HLA-DMB-260ENST00000477537 PDE3BQ13370 1112 aa14.72□□□□□ -0.05
HLA-DMB-260ENST00000477537 MYO5BQ9ULV0 1848 aa14.72□□□□□ -0.05
HLA-DMB-260ENST00000477537 SLC52A1Q9NWF4 448 aa14.72□□□□□ -0.05
HLA-DMB-260ENST00000477537 PLPPR3Q6T4P5 718 aa14.71□□□□□ -0.05
HLA-DMB-260ENST00000477537 B4GALNT3Q6L9W6 998 aa14.7□□□□□ -0.06
HLA-DMB-260ENST00000477537 CARD14Q9BXL6 1004 aa14.7□□□□□ -0.06
HLA-DMB-260ENST00000477537 ADAMTS8Q9UP79 889 aa14.7□□□□□ -0.06
HLA-DMB-260ENST00000477537 FER1L4A9Z1Z3 1794 aa14.7□□□□□ -0.06
HLA-DMB-260ENST00000477537 WDR43Q15061 677 aaKnown RBP eCLIP14.69□□□□□ -0.06
HLA-DMB-260ENST00000477537 ARHGEF28Q8N1W1 1705 aaKnown RBP14.68□□□□□ -0.06
HLA-DMB-260ENST00000477537 TMEM131LA2VDJ0 1609 aa14.68□□□□□ -0.06
HLA-DMB-260ENST00000477537 ESF1Q9H501 851 aaKnown RBP14.68□□□□□ -0.06
HLA-DMB-260ENST00000477537 ZFYVE9O95405 1425 aa14.67□□□□□ -0.06
HLA-DMB-260ENST00000477537 FBXO31Q5XUX0 539 aaPredicted RBP14.67□□□□□ -0.06
HLA-DMB-260ENST00000477537 CEBPAP49715 358 aaPredicted RBP14.66□□□□□ -0.06
HLA-DMB-260ENST00000477537 CDCA7LQ96GN5 454 aa14.66□□□□□ -0.06
HLA-DMB-260ENST00000477537 RCAN3Q9UKA8 241 aa14.66□□□□□ -0.06
HLA-DMB-260ENST00000477537 RIMS1Q86UR5 1692 aaKnown RBP14.66□□□□□ -0.06
HLA-DMB-260ENST00000477537 ZMYM3Q14202 1370 aa14.64□□□□□ -0.07
HLA-DMB-260ENST00000477537 ADAMTSL3P82987 1691 aa14.64□□□□□ -0.07
HLA-DMB-260ENST00000477537 RRP1P56182 461 aaKnown RBP14.64□□□□□ -0.07
HLA-DMB-260ENST00000477537 NSD3Q9BZ95 1437 aa14.64□□□□□ -0.07
HLA-DMB-260ENST00000477537 SLC12A5Q9H2X9 1139 aa14.64□□□□□ -0.07
HLA-DMB-260ENST00000477537 RBM19Q9Y4C8 960 aaKnown RBP14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms