RNA–Protein interactions for RNA: ENST00000477455.5

MTHFD2-206, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

TSL 3

Gene MTHFD2, Length 696 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-206ENST00000477455 RCCD1A6NED2 376 aa13.38□□□□□ -0.27
MTHFD2-206ENST00000477455 IFFO2Q5TF58 517 aa13.37□□□□□ -0.27
MTHFD2-206ENST00000477455 ITGBL1O95965 494 aaPredicted RBP13.36□□□□□ -0.27
MTHFD2-206ENST00000477455 PXYLP1Q8TE99 480 aa13.36□□□□□ -0.27
MTHFD2-206ENST00000477455 NECTIN2Q92692 538 aa13.36□□□□□ -0.27
MTHFD2-206ENST00000477455 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
MTHFD2-206ENST00000477455 ABCC9O60706 1549 aa13.34□□□□□ -0.27
MTHFD2-206ENST00000477455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.34□□□□□ -0.27
MTHFD2-206ENST00000477455 METTL3Q86U44 580 aaKnown RBP13.34□□□□□ -0.27
MTHFD2-206ENST00000477455 APLP1P51693 650 aa13.32□□□□□ -0.28
MTHFD2-206ENST00000477455 KCNC4Q03721 635 aa13.31□□□□□ -0.28
MTHFD2-206ENST00000477455 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.31□□□□□ -0.28
MTHFD2-206ENST00000477455 SCRIBQ14160 1630 aa13.29□□□□□ -0.28
MTHFD2-206ENST00000477455 A0A0G2JS52 829 aa13.26□□□□□ -0.29
MTHFD2-206ENST00000477455 TJAP1Q5JTD0 557 aa13.26□□□□□ -0.29
MTHFD2-206ENST00000477455 LMOD2Q6P5Q4 547 aa13.26□□□□□ -0.29
MTHFD2-206ENST00000477455 MTRQ99707 1265 aa13.26□□□□□ -0.29
MTHFD2-206ENST00000477455 PRR14Q9BWN1 585 aa13.25□□□□□ -0.29
MTHFD2-206ENST00000477455 MAP2K5Q13163 448 aa13.24□□□□□ -0.29
MTHFD2-206ENST00000477455 IL21Q9HBE4 155 aa13.23□□□□□ -0.29
MTHFD2-206ENST00000477455 NLRP7Q8WX94 980 aa13.22□□□□□ -0.29
MTHFD2-206ENST00000477455 PHOX2BQ99453 314 aa13.22□□□□□ -0.29
MTHFD2-206ENST00000477455 SLC10A3P09131 477 aa13.21□□□□□ -0.29
MTHFD2-206ENST00000477455 CFHP08603 1231 aa13.2□□□□□ -0.3
MTHFD2-206ENST00000477455 DAXXQ9UER7 740 aaPredicted RBP13.2□□□□□ -0.3
MTHFD2-206ENST00000477455 IRF6O14896 467 aa13.19□□□□□ -0.3
MTHFD2-206ENST00000477455 COPS2P61201 443 aa13.19□□□□□ -0.3
MTHFD2-206ENST00000477455 KMT5BQ4FZB7 885 aa13.19□□□□□ -0.3
MTHFD2-206ENST00000477455 RSPH4AQ5TD94 716 aa13.19□□□□□ -0.3
MTHFD2-206ENST00000477455 PCDHB3Q9Y5E6 796 aa13.19□□□□□ -0.3
MTHFD2-206ENST00000477455 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
MTHFD2-206ENST00000477455 ZNF516Q92618 1163 aa13.18□□□□□ -0.3
MTHFD2-206ENST00000477455 RSF1Q96T23 1441 aaPredicted RBP13.18□□□□□ -0.3
MTHFD2-206ENST00000477455 DDX11L8A8MPP1 907 aa13.15□□□□□ -0.3
MTHFD2-206ENST00000477455 ACTN4O43707 911 aaKnown RBP13.15□□□□□ -0.3
MTHFD2-206ENST00000477455 RDH13Q8NBN7 331 aa13.15□□□□□ -0.3
MTHFD2-206ENST00000477455 RB1CC1Q8TDY2 1594 aa13.15□□□□□ -0.3
MTHFD2-206ENST00000477455 SLC24A1O60721 1099 aa13.14□□□□□ -0.31
MTHFD2-206ENST00000477455 BLOC1S3Q6QNY0 202 aa13.13□□□□□ -0.31
MTHFD2-206ENST00000477455 CCDC102AQ96A19 550 aa13.13□□□□□ -0.31
MTHFD2-206ENST00000477455 RGS20O76081 388 aa13.12□□□□□ -0.31
MTHFD2-206ENST00000477455 SULF1Q8IWU6 871 aa13.12□□□□□ -0.31
MTHFD2-206ENST00000477455 ZPR1O75312 459 aa13.11□□□□□ -0.31
MTHFD2-206ENST00000477455 ZC3H15Q8WU90 426 aaKnown RBP13.11□□□□□ -0.31
MTHFD2-206ENST00000477455 KRI1Q8N9T8 703 aaKnown RBP13.1□□□□□ -0.31
MTHFD2-206ENST00000477455 NKX2-3Q8TAU0 364 aa13.09□□□□□ -0.31
MTHFD2-206ENST00000477455 ZMYND10O75800 440 aa13.08□□□□□ -0.32
MTHFD2-206ENST00000477455 MDM2Q00987 491 aaPredicted RBP13.07□□□□□ -0.32
MTHFD2-206ENST00000477455 BARGINQ6ZT62 677 aa13.07□□□□□ -0.32
MTHFD2-206ENST00000477455 PPP1R18Q6NYC8 613 aa13.06□□□□□ -0.32
MTHFD2-206ENST00000477455 NR1I2O75469 434 aa13.04□□□□□ -0.32
MTHFD2-206ENST00000477455 GCGRP47871 477 aa13.04□□□□□ -0.32
MTHFD2-206ENST00000477455 PUS10Q3MIT2 529 aaKnown RBP13.04□□□□□ -0.32
MTHFD2-206ENST00000477455 TLL1O43897 1013 aa13.03□□□□□ -0.32
MTHFD2-206ENST00000477455 FUT2Q10981 343 aa13.02□□□□□ -0.33
MTHFD2-206ENST00000477455 GPCPD1Q9NPB8 672 aa13.01□□□□□ -0.33
MTHFD2-206ENST00000477455 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.01□□□□□ -0.33
MTHFD2-206ENST00000477455 CLCN1P35523 988 aa13□□□□□ -0.33
MTHFD2-206ENST00000477455 GGCXP38435 758 aa13□□□□□ -0.33
MTHFD2-206ENST00000477455 SCUBE3Q8IX30 993 aa13□□□□□ -0.33
MTHFD2-206ENST00000477455 CD46P15529 392 aa12.99□□□□□ -0.33
MTHFD2-206ENST00000477455 ATP6V1AP38606 617 aa12.99□□□□□ -0.33
MTHFD2-206ENST00000477455 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
MTHFD2-206ENST00000477455 MORN1Q5T089 497 aa12.97□□□□□ -0.33
MTHFD2-206ENST00000477455 MROH2BQ7Z745 1585 aa12.96□□□□□ -0.33
MTHFD2-206ENST00000477455 ADH1BP00325 375 aa12.95□□□□□ -0.34
MTHFD2-206ENST00000477455 BCANQ96GW7 911 aa12.95□□□□□ -0.34
MTHFD2-206ENST00000477455 TMUB1Q9BVT8 246 aa12.95□□□□□ -0.34
MTHFD2-206ENST00000477455 GRIPAP1Q4V328 841 aa12.94□□□□□ -0.34
MTHFD2-206ENST00000477455 FAM217BQ9NTX9 383 aaPredicted RBP12.94□□□□□ -0.34
MTHFD2-206ENST00000477455 BAZ1AQ9NRL2 1556 aaPredicted RBP12.94□□□□□ -0.34
MTHFD2-206ENST00000477455 TTLL12Q14166 644 aaPredicted RBP12.93□□□□□ -0.34
MTHFD2-206ENST00000477455 REPIN1Q9BWE0 567 aaKnown RBP12.93□□□□□ -0.34
MTHFD2-206ENST00000477455 S1PR4O95977 384 aa12.92□□□□□ -0.34
MTHFD2-206ENST00000477455 SPSB2Q99619 263 aa12.92□□□□□ -0.34
MTHFD2-206ENST00000477455 PRKD2Q9BZL6 878 aa12.92□□□□□ -0.34
MTHFD2-206ENST00000477455 SLC27A5Q9Y2P5 690 aa12.92□□□□□ -0.34
MTHFD2-206ENST00000477455 KDM4AO75164 1064 aa12.91□□□□□ -0.34
MTHFD2-206ENST00000477455 AMHR2Q16671 573 aa12.91□□□□□ -0.34
MTHFD2-206ENST00000477455 RNF223E7ERA6 249 aa12.9□□□□□ -0.34
MTHFD2-206ENST00000477455 SLC6A16Q9GZN6 736 aa12.9□□□□□ -0.34
MTHFD2-206ENST00000477455 IRX2Q9BZI1 471 aaPredicted RBP12.89□□□□□ -0.35
MTHFD2-206ENST00000477455 FMNL1O95466 1100 aaPredicted RBP12.88□□□□□ -0.35
MTHFD2-206ENST00000477455 AK7Q96M32 723 aa12.88□□□□□ -0.35
MTHFD2-206ENST00000477455 PPEF1O14829 653 aaPredicted RBP12.87□□□□□ -0.35
MTHFD2-206ENST00000477455 SSTR3P32745 418 aaPredicted RBP12.87□□□□□ -0.35
MTHFD2-206ENST00000477455 THAP11Q96EK4 314 aa12.87□□□□□ -0.35
MTHFD2-206ENST00000477455 WIZO95785 1651 aa12.86□□□□□ -0.35
MTHFD2-206ENST00000477455 UNC13AQ9UPW8 1703 aa12.86□□□□□ -0.35
MTHFD2-206ENST00000477455 TRIM66O15016 1216 aa12.86□□□□□ -0.35
MTHFD2-206ENST00000477455 USP46P62068 366 aa12.86□□□□□ -0.35
MTHFD2-206ENST00000477455 V9GY48 417 aaPredicted RBP12.86□□□□□ -0.35
MTHFD2-206ENST00000477455 GIGYF2Q6Y7W6 1299 aaKnown RBP12.85□□□□□ -0.35
MTHFD2-206ENST00000477455 ANKLE1Q8NAG6 615 aa12.85□□□□□ -0.35
MTHFD2-206ENST00000477455 SALL2Q9Y467 1007 aaPredicted RBP12.85□□□□□ -0.35
MTHFD2-206ENST00000477455 BRICD5Q6PL45 260 aa12.84□□□□□ -0.35
MTHFD2-206ENST00000477455 NUTM1Q86Y26 1132 aa12.84□□□□□ -0.35
MTHFD2-206ENST00000477455 HOXA2O43364 376 aa12.83□□□□□ -0.36
MTHFD2-206ENST00000477455 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.36
MTHFD2-206ENST00000477455 HLA-CQ95604 372 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms