RNA–Protein interactions for RNA: ENST00000477447.6

TARDBP-208, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 409 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-208ENST00000477447 MS4A1P11836 297 aa7.26□□□□□ -1.25
TARDBP-208ENST00000477447 SWT1Q5T5J6 900 aaKnown RBP7.26□□□□□ -1.25
TARDBP-208ENST00000477447 LAPTM4BQ86VI4 370 aa7.26□□□□□ -1.25
TARDBP-208ENST00000477447 TMUB1Q9BVT8 246 aa7.26□□□□□ -1.25
TARDBP-208ENST00000477447 FAM217BQ9NTX9 383 aaPredicted RBP7.26□□□□□ -1.25
TARDBP-208ENST00000477447 DAXXQ9UER7 740 aaPredicted RBP7.26□□□□□ -1.25
TARDBP-208ENST00000477447 GOLGA8CPA6NN73 597 aa7.24□□□□□ -1.25
TARDBP-208ENST00000477447 DDX11L8A8MPP1 907 aa7.24□□□□□ -1.25
TARDBP-208ENST00000477447 RNF40O75150 1001 aa7.24□□□□□ -1.25
TARDBP-208ENST00000477447 SSTR3P32745 418 aaPredicted RBP7.24□□□□□ -1.25
TARDBP-208ENST00000477447 SAMD7Q7Z3H4 446 aa7.24□□□□□ -1.25
TARDBP-208ENST00000477447 IL27Q8NEV9 243 aa7.24□□□□□ -1.25
TARDBP-208ENST00000477447 ZFRQ96KR1 1074 aaKnown RBP7.24□□□□□ -1.25
TARDBP-208ENST00000477447 FAM117AQ9C073 453 aa7.24□□□□□ -1.25
TARDBP-208ENST00000477447 HDGFP51858 240 aaKnown RBP7.23□□□□□ -1.25
TARDBP-208ENST00000477447 DDRGK1Q96HY6 314 aa7.23□□□□□ -1.25
TARDBP-208ENST00000477447 SULF1Q8IWU6 871 aa7.22□□□□□ -1.25
TARDBP-208ENST00000477447 RDH13Q8NBN7 331 aa7.22□□□□□ -1.25
TARDBP-208ENST00000477447 SLC4A3P48751 1232 aa7.21□□□□□ -1.26
TARDBP-208ENST00000477447 TMEM132AQ24JP5 1023 aa7.21□□□□□ -1.26
TARDBP-208ENST00000477447 ANKK1Q8NFD2 765 aa7.21□□□□□ -1.26
TARDBP-208ENST00000477447 LRCH3Q96II8 777 aa7.21□□□□□ -1.26
TARDBP-208ENST00000477447 BEGAINQ9BUH8 593 aa7.21□□□□□ -1.26
TARDBP-208ENST00000477447 PLEKHG3A1L390 1219 aa7.2□□□□□ -1.26
TARDBP-208ENST00000477447 CD46P15529 392 aa7.2□□□□□ -1.26
TARDBP-208ENST00000477447 SLF2Q8IX21 1173 aa7.2□□□□□ -1.26
TARDBP-208ENST00000477447 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.2□□□□□ -1.26
TARDBP-208ENST00000477447 WNT2BQ93097 391 aa7.19□□□□□ -1.26
TARDBP-208ENST00000477447 BCAMP50895 628 aa7.18□□□□□ -1.26
TARDBP-208ENST00000477447 SLC10A3P09131 477 aa7.17□□□□□ -1.26
TARDBP-208ENST00000477447 RSPH4AQ5TD94 716 aa7.17□□□□□ -1.26
TARDBP-208ENST00000477447 SOWAHBA6NEL2 793 aa7.16□□□□□ -1.26
TARDBP-208ENST00000477447 CFHP08603 1231 aa7.16□□□□□ -1.26
TARDBP-208ENST00000477447 KCTD12Q96CX2 325 aaKnown RBP7.16□□□□□ -1.26
TARDBP-208ENST00000477447 HPS5Q9UPZ3 1129 aa7.16□□□□□ -1.26
TARDBP-208ENST00000477447 NUTM1Q86Y26 1132 aa7.15□□□□□ -1.26
TARDBP-208ENST00000477447 GCGRP47871 477 aa7.14□□□□□ -1.27
TARDBP-208ENST00000477447 SPIRE2Q8WWL2 714 aa7.14□□□□□ -1.27
TARDBP-208ENST00000477447 NECTIN2Q92692 538 aa7.14□□□□□ -1.27
TARDBP-208ENST00000477447 TBC1D2Q9BYX2 928 aa7.14□□□□□ -1.27
TARDBP-208ENST00000477447 PPP4CP60510 307 aa7.13□□□□□ -1.27
TARDBP-208ENST00000477447 KMT5BQ4FZB7 885 aa7.13□□□□□ -1.27
TARDBP-208ENST00000477447 SH3D19Q5HYK7 790 aa7.13□□□□□ -1.27
TARDBP-208ENST00000477447 THSD4Q6ZMP0 1018 aa7.13□□□□□ -1.27
TARDBP-208ENST00000477447 RSPH6AQ9H0K4 717 aa7.13□□□□□ -1.27
TARDBP-208ENST00000477447 KDM4AO75164 1064 aa7.12□□□□□ -1.27
TARDBP-208ENST00000477447 DIXDC1Q155Q3 683 aa7.12□□□□□ -1.27
TARDBP-208ENST00000477447 MYSM1Q5VVJ2 828 aa7.12□□□□□ -1.27
TARDBP-208ENST00000477447 TSR3Q9UJK0 312 aaKnown RBP7.12□□□□□ -1.27
TARDBP-208ENST00000477447 MYT1LQ9UL68 1186 aa7.12□□□□□ -1.27
TARDBP-208ENST00000477447 POLR3EQ9NVU0 708 aa7.11□□□□□ -1.27
TARDBP-208ENST00000477447 ATP1B4Q9UN42 357 aaPredicted RBP7.11□□□□□ -1.27
TARDBP-208ENST00000477447 CLK2P49760 499 aaKnown RBP7.1□□□□□ -1.27
TARDBP-208ENST00000477447 USP46P62068 366 aa7.1□□□□□ -1.27
TARDBP-208ENST00000477447 FUT2Q10981 343 aa7.1□□□□□ -1.27
TARDBP-208ENST00000477447 PCMTD1Q96MG8 357 aaPredicted RBP7.1□□□□□ -1.27
TARDBP-208ENST00000477447 WBP1LQ9NX94 342 aa7.1□□□□□ -1.27
TARDBP-208ENST00000477447 MOXD2PA6NHM9 499 aa7.09□□□□□ -1.27
TARDBP-208ENST00000477447 HOXA2O43364 376 aa7.09□□□□□ -1.27
TARDBP-208ENST00000477447 PTPN5P54829 565 aa7.09□□□□□ -1.27
TARDBP-208ENST00000477447 SKIV2LQ15477 1246 aaKnown RBP7.09□□□□□ -1.27
TARDBP-208ENST00000477447 PRR14Q9BWN1 585 aa7.09□□□□□ -1.27
TARDBP-208ENST00000477447 GOPCQ9HD26 462 aa7.09□□□□□ -1.27
TARDBP-208ENST00000477447 ACTN4O43707 911 aaKnown RBP7.08□□□□□ -1.28
TARDBP-208ENST00000477447 NDUFV2P19404 249 aa7.08□□□□□ -1.28
TARDBP-208ENST00000477447 APLP1P51693 650 aa7.08□□□□□ -1.28
TARDBP-208ENST00000477447 MMRN1Q13201 1228 aa7.08□□□□□ -1.28
TARDBP-208ENST00000477447 RIC3Q7Z5B4 369 aa7.08□□□□□ -1.28
TARDBP-208ENST00000477447 SPNS2Q8IVW8 549 aa7.08□□□□□ -1.28
TARDBP-208ENST00000477447 HLA-CQ95604 372 aa7.08□□□□□ -1.28
TARDBP-208ENST00000477447 LIMD1Q9UGP4 676 aa7.08□□□□□ -1.28
TARDBP-208ENST00000477447 GUCA2AQ02747 115 aa7.07□□□□□ -1.28
TARDBP-208ENST00000477447 CSPP1Q1MSJ5 1256 aa7.07□□□□□ -1.28
TARDBP-208ENST00000477447 PUS10Q3MIT2 529 aaKnown RBP7.07□□□□□ -1.28
TARDBP-208ENST00000477447 GRIPAP1Q4V328 841 aa7.07□□□□□ -1.28
TARDBP-208ENST00000477447 RSBN1LQ6PCB5 846 aaPredicted RBP7.07□□□□□ -1.28
TARDBP-208ENST00000477447 RNF166Q96A37 237 aaPredicted RBP7.07□□□□□ -1.28
TARDBP-208ENST00000477447 SPTLC1O15269 473 aa7.06□□□□□ -1.28
TARDBP-208ENST00000477447 FDX1P10109 184 aa7.06□□□□□ -1.28
TARDBP-208ENST00000477447 ATP6V1AP38606 617 aa7.06□□□□□ -1.28
TARDBP-208ENST00000477447 PROCA1Q8NCQ7 364 aaPredicted RBP7.06□□□□□ -1.28
TARDBP-208ENST00000477447 PCDHB3Q9Y5E6 796 aa7.06□□□□□ -1.28
TARDBP-208ENST00000477447 MORN1Q5T089 497 aa7.04□□□□□ -1.28
TARDBP-208ENST00000477447 BLOC1S3Q6QNY0 202 aa7.03□□□□□ -1.28
TARDBP-208ENST00000477447 NYAP1Q6ZVC0 841 aa7.03□□□□□ -1.28
TARDBP-208ENST00000477447 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.03□□□□□ -1.28
TARDBP-208ENST00000477447 PCDHGC3Q9UN70 934 aa7.03□□□□□ -1.28
TARDBP-208ENST00000477447 PCDHB15Q9Y5E8 787 aa7.03□□□□□ -1.28
TARDBP-208ENST00000477447 GTF3C3Q9Y5Q9 886 aa7.03□□□□□ -1.28
TARDBP-208ENST00000477447 GJA5P36382 358 aa7.02□□□□□ -1.29
TARDBP-208ENST00000477447 COPS2P61201 443 aa7.02□□□□□ -1.29
TARDBP-208ENST00000477447 QPCTQ16769 361 aa7.02□□□□□ -1.29
TARDBP-208ENST00000477447 TUSC1Q2TAM9 212 aa7.02□□□□□ -1.29
TARDBP-208ENST00000477447 CABLES1Q8TDN4 633 aa7.02□□□□□ -1.29
TARDBP-208ENST00000477447 SLC27A5Q9Y2P5 690 aa7.02□□□□□ -1.29
TARDBP-208ENST00000477447 NUTM2BA6NNL0 878 aaPredicted RBP7.01□□□□□ -1.29
TARDBP-208ENST00000477447 NUTM2EB1AL46 878 aaPredicted RBP7.01□□□□□ -1.29
TARDBP-208ENST00000477447 NR1I2O75469 434 aa7.01□□□□□ -1.29
TARDBP-208ENST00000477447 NUTM2DQ5VT03 806 aaPredicted RBP7.01□□□□□ -1.29
TARDBP-208ENST00000477447 NUTM2AQ8IVF1 878 aaPredicted RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms