RNA–Protein interactions for RNA: ENST00000477393.1

RNF7-204, Transcript of ring finger protein 7, humanhuman

TSL 2

Gene RNF7, Length 862 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF7-204ENST00000477393 ANKRD50Q9ULJ7 1429 aa23.53■■□□□ 1.36
RNF7-204ENST00000477393 RBM33Q96EV2 1170 aaKnown RBP23.52■■□□□ 1.36
RNF7-204ENST00000477393 ZFYVE9O95405 1425 aa23.51■■□□□ 1.35
RNF7-204ENST00000477393 HDGFP51858 240 aaKnown RBP23.5■■□□□ 1.35
RNF7-204ENST00000477393 PLEKHG1Q9ULL1 1385 aa23.5■■□□□ 1.35
RNF7-204ENST00000477393 BCANQ96GW7 911 aa23.49■■□□□ 1.35
RNF7-204ENST00000477393 MSH6P52701 1360 aa23.49■■□□□ 1.35
RNF7-204ENST00000477393 CHD2O14647 1828 aaKnown RBP23.48■■□□□ 1.35
RNF7-204ENST00000477393 FAM50AQ14320 339 aaKnown RBP23.47■■□□□ 1.35
RNF7-204ENST00000477393 SLAIN2Q9P270 581 aa23.47■■□□□ 1.35
RNF7-204ENST00000477393 TMEM131LA2VDJ0 1609 aa23.46■■□□□ 1.35
RNF7-204ENST00000477393 POTEAQ6S8J7 498 aa23.46■■□□□ 1.35
RNF7-204ENST00000477393 RIMS2Q9UQ26 1411 aa23.46■■□□□ 1.35
RNF7-204ENST00000477393 MYO5BQ9ULV0 1848 aa23.45■■□□□ 1.34
RNF7-204ENST00000477393 TBX22Q9Y458 520 aa23.45■■□□□ 1.34
RNF7-204ENST00000477393 NCOA3Q9Y6Q9 1424 aa23.44■■□□□ 1.34
RNF7-204ENST00000477393 GCC2Q8IWJ2 1684 aa23.44■■□□□ 1.34
RNF7-204ENST00000477393 PPP1R15AO75807 674 aaPredicted RBP23.42■■□□□ 1.34
RNF7-204ENST00000477393 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.42■■□□□ 1.34
RNF7-204ENST00000477393 UNC13BO14795 1591 aa23.4■■□□□ 1.34
RNF7-204ENST00000477393 PHLPP1O60346 1717 aa23.39■■□□□ 1.34
RNF7-204ENST00000477393 JCADQ9P266 1359 aa23.39■■□□□ 1.33
RNF7-204ENST00000477393 ADAMTS13Q76LX8 1427 aa23.36■■□□□ 1.33
RNF7-204ENST00000477393 E9PCH4 1651 aa23.36■■□□□ 1.33
RNF7-204ENST00000477393 ROCK1Q13464 1354 aa23.36■■□□□ 1.33
RNF7-204ENST00000477393 PIK3R4Q99570 1358 aa23.36■■□□□ 1.33
RNF7-204ENST00000477393 CHGAP10645 457 aaKnown RBP23.34■■□□□ 1.33
RNF7-204ENST00000477393 DIP2AQ14689 1571 aa23.34■■□□□ 1.33
RNF7-204ENST00000477393 C19orf44Q9H6X5 657 aa23.33■■□□□ 1.33
RNF7-204ENST00000477393 COL16A1Q07092 1604 aaPredicted RBP23.33■■□□□ 1.32
RNF7-204ENST00000477393 CADPS2Q86UW7 1296 aa23.32■■□□□ 1.32
RNF7-204ENST00000477393 IQGAP3Q86VI3 1631 aa23.32■■□□□ 1.32
RNF7-204ENST00000477393 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.3■■□□□ 1.32
RNF7-204ENST00000477393 NUTM2DQ5VT03 806 aaPredicted RBP23.29■■□□□ 1.32
RNF7-204ENST00000477393 SPATA31A6Q5VVP1 1343 aa23.29■■□□□ 1.32
RNF7-204ENST00000477393 C14orf37Q86TY3 774 aa23.28■■□□□ 1.32
RNF7-204ENST00000477393 ATF3P18847 181 aa23.27■■□□□ 1.32
RNF7-204ENST00000477393 NUP155O75694 1391 aa23.27■■□□□ 1.31
RNF7-204ENST00000477393 AHDC1Q5TGY3 1603 aaPredicted RBP23.26■■□□□ 1.31
RNF7-204ENST00000477393 TRPM2O94759 1503 aa23.25■■□□□ 1.31
RNF7-204ENST00000477393 AMOTL2Q9Y2J4 779 aa23.25■■□□□ 1.31
RNF7-204ENST00000477393 PTPRUQ92729 1446 aa23.24■■□□□ 1.31
RNF7-204ENST00000477393 LRP6O75581 1613 aa23.23■■□□□ 1.31
RNF7-204ENST00000477393 SHPRHQ149N8 1683 aa23.22■■□□□ 1.31
RNF7-204ENST00000477393 ZNF772Q68DY9 489 aaPredicted RBP23.21■■□□□ 1.31
RNF7-204ENST00000477393 DCCP43146 1447 aa23.2■■□□□ 1.3
RNF7-204ENST00000477393 BRINP3Q76B58 766 aa23.2■■□□□ 1.3
RNF7-204ENST00000477393 SETD1AO15047 1707 aaKnown RBP23.19■■□□□ 1.3
RNF7-204ENST00000477393 MEX3CQ5U5Q3 659 aaKnown RBP23.18■■□□□ 1.3
RNF7-204ENST00000477393 NRXN3Q9Y4C0 1643 aa23.18■■□□□ 1.3
RNF7-204ENST00000477393 SETBP1Q9Y6X0 1596 aa23.18■■□□□ 1.3
RNF7-204ENST00000477393 XRN1Q8IZH2 1706 aaKnown RBP23.16■■□□□ 1.3
RNF7-204ENST00000477393 SPHKAPQ2M3C7 1700 aa23.13■■□□□ 1.29
RNF7-204ENST00000477393 ITGAEP38570 1179 aa23.13■■□□□ 1.29
RNF7-204ENST00000477393 SETD5Q9C0A6 1442 aa23.12■■□□□ 1.29
RNF7-204ENST00000477393 ASXL1Q8IXJ9 1541 aa23.12■■□□□ 1.29
RNF7-204ENST00000477393 MST1RQ04912 1400 aa23.11■■□□□ 1.29
RNF7-204ENST00000477393 METP08581 1390 aa23.11■■□□□ 1.29
RNF7-204ENST00000477393 ZNF326Q5BKZ1 582 aaKnown RBP23.1■■□□□ 1.29
RNF7-204ENST00000477393 UPF1Q92900 1129 aaKnown RBP eCLIP23.09■■□□□ 1.29
RNF7-204ENST00000477393 RXRBP28702 533 aa23.08■■□□□ 1.29
RNF7-204ENST00000477393 NHSL1Q5SYE7 1610 aa23.08■■□□□ 1.28
RNF7-204ENST00000477393 TRIM52Q96A61 297 aa23.07■■□□□ 1.28
RNF7-204ENST00000477393 LRRC59Q96AG4 307 aaKnown RBP23.07■■□□□ 1.28
RNF7-204ENST00000477393 CDK12Q9NYV4 1490 aaPredicted RBP23.06■■□□□ 1.28
RNF7-204ENST00000477393 NUTM2BA6NNL0 878 aaPredicted RBP23.06■■□□□ 1.28
RNF7-204ENST00000477393 NUTM2EB1AL46 878 aaPredicted RBP23.06■■□□□ 1.28
RNF7-204ENST00000477393 NUTM2AQ8IVF1 878 aaPredicted RBP23.06■■□□□ 1.28
RNF7-204ENST00000477393 NEXMIFQ5QGS0 1516 aa23.05■■□□□ 1.28
RNF7-204ENST00000477393 ADGRL3Q9HAR2 1447 aa23.05■■□□□ 1.28
RNF7-204ENST00000477393 CLTCL1P53675 1640 aa23.03■■□□□ 1.28
RNF7-204ENST00000477393 AFF2P51816 1311 aa23.03■■□□□ 1.28
RNF7-204ENST00000477393 NALCNQ8IZF0 1738 aa22.99■■□□□ 1.27
RNF7-204ENST00000477393 PPARGC1BQ86YN6 1023 aaKnown RBP22.99■■□□□ 1.27
RNF7-204ENST00000477393 PNPLA6Q8IY17 1366 aa22.99■■□□□ 1.27
RNF7-204ENST00000477393 KIF1BO60333 1816 aa22.98■■□□□ 1.27
RNF7-204ENST00000477393 DDX17Q92841 729 aaKnown RBP22.98■■□□□ 1.27
RNF7-204ENST00000477393 C1orf167Q5SNV9 1468 aa22.97■■□□□ 1.27
RNF7-204ENST00000477393 VGFO15240 615 aaPredicted RBP22.96■■□□□ 1.27
RNF7-204ENST00000477393 NAIPQ13075 1403 aa22.96■■□□□ 1.27
RNF7-204ENST00000477393 PTCH1Q13635 1447 aa22.96■■□□□ 1.27
RNF7-204ENST00000477393 LAMC1P11047 1609 aa22.95■■□□□ 1.26
RNF7-204ENST00000477393 PRAG1Q86YV5 1406 aa22.94■■□□□ 1.26
RNF7-204ENST00000477393 RRBP1Q9P2E9 1410 aaKnown RBP22.94■■□□□ 1.26
RNF7-204ENST00000477393 RBM6P78332 1123 aaKnown RBP22.94■■□□□ 1.26
RNF7-204ENST00000477393 C8orf37Q96NL8 207 aa22.94■■□□□ 1.26
RNF7-204ENST00000477393 QTRT2Q9H974 415 aaKnown RBP22.94■■□□□ 1.26
RNF7-204ENST00000477393 SOS2Q07890 1332 aaPredicted RBP22.92■■□□□ 1.26
RNF7-204ENST00000477393 RPGRIP1LQ68CZ1 1315 aa22.92■■□□□ 1.26
RNF7-204ENST00000477393 ROBO2Q9HCK4 1378 aa22.91■■□□□ 1.26
RNF7-204ENST00000477393 ORAI2Q96SN7 254 aa22.89■■□□□ 1.25
RNF7-204ENST00000477393 RGS12O14924 1447 aa22.89■■□□□ 1.25
RNF7-204ENST00000477393 NGLY1Q96IV0 654 aa22.88■■□□□ 1.25
RNF7-204ENST00000477393 HFM1A2PYH4 1435 aa22.85■■□□□ 1.25
RNF7-204ENST00000477393 ADAMTS2O95450 1211 aa22.85■■□□□ 1.25
RNF7-204ENST00000477393 FNBP4Q8N3X1 1017 aaPredicted RBP22.83■■□□□ 1.25
RNF7-204ENST00000477393 PPLO60437 1756 aa22.83■■□□□ 1.24
RNF7-204ENST00000477393 SLC4A1APQ9BWU0 796 aaKnown RBP22.82■■□□□ 1.24
RNF7-204ENST00000477393 USP21Q9UK80 565 aa22.81■■□□□ 1.24
RNF7-204ENST00000477393 COL22A1Q8NFW1 1626 aaPredicted RBP22.8■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms