RNA–Protein interactions for RNA: ENST00000477169.5

SMARCD3-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-210ENST00000477169 MYO5BQ9ULV0 1848 aa25.94■■□□□ 1.74
SMARCD3-210ENST00000477169 HSPA1LP34931 641 aa25.94■■□□□ 1.74
SMARCD3-210ENST00000477169 ALKQ9UM73 1620 aa25.94■■□□□ 1.74
SMARCD3-210ENST00000477169 CHGAP10645 457 aaKnown RBP25.93■■□□□ 1.74
SMARCD3-210ENST00000477169 BCANQ96GW7 911 aa25.93■■□□□ 1.74
SMARCD3-210ENST00000477169 RIMS2Q9UQ26 1411 aa25.93■■□□□ 1.74
SMARCD3-210ENST00000477169 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.91■■□□□ 1.74
SMARCD3-210ENST00000477169 PLEKHG1Q9ULL1 1385 aa25.91■■□□□ 1.74
SMARCD3-210ENST00000477169 PPP1R15AO75807 674 aaPredicted RBP25.9■■□□□ 1.74
SMARCD3-210ENST00000477169 NAIPQ13075 1403 aa25.88■■□□□ 1.73
SMARCD3-210ENST00000477169 XIRP1Q702N8 1843 aaKnown RBP25.87■■□□□ 1.73
SMARCD3-210ENST00000477169 PROSER2Q86WR7 435 aaPredicted RBP25.85■■□□□ 1.73
SMARCD3-210ENST00000477169 TMEM94Q12767 1356 aa25.84■■□□□ 1.73
SMARCD3-210ENST00000477169 TBX22Q9Y458 520 aa25.84■■□□□ 1.73
SMARCD3-210ENST00000477169 SENP3Q9H4L4 574 aaPredicted RBP25.83■■□□□ 1.73
SMARCD3-210ENST00000477169 NWD1Q149M9 1564 aa25.82■■□□□ 1.72
SMARCD3-210ENST00000477169 NKTRP30414 1462 aaKnown RBP25.81■■□□□ 1.72
SMARCD3-210ENST00000477169 HFM1A2PYH4 1435 aa25.8■■□□□ 1.72
SMARCD3-210ENST00000477169 SPHKAPQ2M3C7 1700 aa25.8■■□□□ 1.72
SMARCD3-210ENST00000477169 NUTM2DQ5VT03 806 aaPredicted RBP25.8■■□□□ 1.72
SMARCD3-210ENST00000477169 CHD2O14647 1828 aaKnown RBP25.78■■□□□ 1.72
SMARCD3-210ENST00000477169 RBM33Q96EV2 1170 aaKnown RBP25.77■■□□□ 1.72
SMARCD3-210ENST00000477169 TRIM52Q96A61 297 aa25.76■■□□□ 1.71
SMARCD3-210ENST00000477169 ADAMTS13Q76LX8 1427 aa25.76■■□□□ 1.71
SMARCD3-210ENST00000477169 FAM135BQ49AJ0 1406 aa25.74■■□□□ 1.71
SMARCD3-210ENST00000477169 DIP2AQ14689 1571 aa25.73■■□□□ 1.71
SMARCD3-210ENST00000477169 PIK3R4Q99570 1358 aa25.73■■□□□ 1.71
SMARCD3-210ENST00000477169 SOCS7O14512 581 aa25.72■■□□□ 1.71
SMARCD3-210ENST00000477169 ZNF326Q5BKZ1 582 aaKnown RBP25.72■■□□□ 1.71
SMARCD3-210ENST00000477169 TRPM2O94759 1503 aa25.71■■□□□ 1.71
SMARCD3-210ENST00000477169 MSH6P52701 1360 aa25.7■■□□□ 1.71
SMARCD3-210ENST00000477169 NCOA3Q9Y6Q9 1424 aa25.7■■□□□ 1.7
SMARCD3-210ENST00000477169 SLC4A1APQ9BWU0 796 aaKnown RBP25.68■■□□□ 1.7
SMARCD3-210ENST00000477169 MED1Q15648 1581 aaPredicted RBP25.68■■□□□ 1.7
SMARCD3-210ENST00000477169 CLTCL1P53675 1640 aa25.67■■□□□ 1.7
SMARCD3-210ENST00000477169 TRIM26Q12899 539 aaPredicted RBP25.65■■□□□ 1.7
SMARCD3-210ENST00000477169 SLAIN2Q9P270 581 aa25.65■■□□□ 1.7
SMARCD3-210ENST00000477169 SETD5Q9C0A6 1442 aa25.64■■□□□ 1.7
SMARCD3-210ENST00000477169 AMOTL2Q9Y2J4 779 aa25.64■■□□□ 1.7
SMARCD3-210ENST00000477169 KIF1BO60333 1816 aa25.63■■□□□ 1.69
SMARCD3-210ENST00000477169 SETBP1Q9Y6X0 1596 aa25.63■■□□□ 1.69
SMARCD3-210ENST00000477169 C14orf37Q86TY3 774 aa25.61■■□□□ 1.69
SMARCD3-210ENST00000477169 NRXN3Q9Y4C0 1643 aa25.61■■□□□ 1.69
SMARCD3-210ENST00000477169 PTPRUQ92729 1446 aa25.61■■□□□ 1.69
SMARCD3-210ENST00000477169 ROBO1Q9Y6N7 1651 aa25.61■■□□□ 1.69
SMARCD3-210ENST00000477169 NEXMIFQ5QGS0 1516 aa25.6■■□□□ 1.69
SMARCD3-210ENST00000477169 C19orf44Q9H6X5 657 aa25.6■■□□□ 1.69
SMARCD3-210ENST00000477169 VGFO15240 615 aaPredicted RBP25.56■■□□□ 1.68
SMARCD3-210ENST00000477169 CADPS2Q86UW7 1296 aa25.56■■□□□ 1.68
SMARCD3-210ENST00000477169 PHF23Q9BUL5 403 aaPredicted RBP25.56■■□□□ 1.68
SMARCD3-210ENST00000477169 RPGRIP1LQ68CZ1 1315 aa25.56■■□□□ 1.68
SMARCD3-210ENST00000477169 RAB3GAP2Q9H2M9 1393 aa25.56■■□□□ 1.68
SMARCD3-210ENST00000477169 METP08581 1390 aa25.55■■□□□ 1.68
SMARCD3-210ENST00000477169 ATF3P18847 181 aa25.54■■□□□ 1.68
SMARCD3-210ENST00000477169 ACIN1Q9UKV3 1341 aaKnown RBP25.54■■□□□ 1.68
SMARCD3-210ENST00000477169 MPHOSPH9Q99550 1183 aa25.53■■□□□ 1.68
SMARCD3-210ENST00000477169 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.53■■□□□ 1.68
SMARCD3-210ENST00000477169 XRN1Q8IZH2 1706 aaKnown RBP25.52■■□□□ 1.68
SMARCD3-210ENST00000477169 FOXD1Q16676 465 aa25.52■■□□□ 1.68
SMARCD3-210ENST00000477169 HRCP23327 699 aa25.47■■□□□ 1.67
SMARCD3-210ENST00000477169 DCCP43146 1447 aa25.46■■□□□ 1.67
SMARCD3-210ENST00000477169 PHLPP1O60346 1717 aa25.46■■□□□ 1.67
SMARCD3-210ENST00000477169 CCDC144AA2RUR9 1427 aa25.46■■□□□ 1.67
SMARCD3-210ENST00000477169 PPLO60437 1756 aa25.44■■□□□ 1.66
SMARCD3-210ENST00000477169 JCADQ9P266 1359 aa25.42■■□□□ 1.66
SMARCD3-210ENST00000477169 SETD1AO15047 1707 aaKnown RBP25.4■■□□□ 1.66
SMARCD3-210ENST00000477169 RGL3Q3MIN7 710 aa25.39■■□□□ 1.66
SMARCD3-210ENST00000477169 BRINP3Q76B58 766 aa25.39■■□□□ 1.66
SMARCD3-210ENST00000477169 RGS17Q9UGC6 210 aaPredicted RBP25.39■■□□□ 1.66
SMARCD3-210ENST00000477169 SPATA31E1Q6ZUB1 1445 aa25.38■■□□□ 1.65
SMARCD3-210ENST00000477169 ADGRL3Q9HAR2 1447 aa25.38■■□□□ 1.65
SMARCD3-210ENST00000477169 COL16A1Q07092 1604 aaPredicted RBP25.37■■□□□ 1.65
SMARCD3-210ENST00000477169 AHDC1Q5TGY3 1603 aaPredicted RBP25.37■■□□□ 1.65
SMARCD3-210ENST00000477169 PTCH1Q13635 1447 aa25.37■■□□□ 1.65
SMARCD3-210ENST00000477169 MST1RQ04912 1400 aa25.36■■□□□ 1.65
SMARCD3-210ENST00000477169 ANKRD30BQ9BXX2 1392 aa25.35■■□□□ 1.65
SMARCD3-210ENST00000477169 PRAG1Q86YV5 1406 aa25.35■■□□□ 1.65
SMARCD3-210ENST00000477169 ADGRF5Q8IZF2 1346 aa25.35■■□□□ 1.65
SMARCD3-210ENST00000477169 ROBO2Q9HCK4 1378 aa25.33■■□□□ 1.65
SMARCD3-210ENST00000477169 PCGF6Q9BYE7 350 aa25.33■■□□□ 1.65
SMARCD3-210ENST00000477169 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
SMARCD3-210ENST00000477169 SPATA31A6Q5VVP1 1343 aa25.31■■□□□ 1.64
SMARCD3-210ENST00000477169 ASXL1Q8IXJ9 1541 aa25.3■■□□□ 1.64
SMARCD3-210ENST00000477169 IFT172Q9UG01 1749 aa25.29■■□□□ 1.64
SMARCD3-210ENST00000477169 C1orf167Q5SNV9 1468 aa25.25■■□□□ 1.63
SMARCD3-210ENST00000477169 SHPRHQ149N8 1683 aa25.25■■□□□ 1.63
SMARCD3-210ENST00000477169 POTEAQ6S8J7 498 aa25.24■■□□□ 1.63
SMARCD3-210ENST00000477169 LRRC59Q96AG4 307 aaKnown RBP25.24■■□□□ 1.63
SMARCD3-210ENST00000477169 NHSL1Q5SYE7 1610 aa25.23■■□□□ 1.63
SMARCD3-210ENST00000477169 PIK3C2GO75747 1445 aa25.23■■□□□ 1.63
SMARCD3-210ENST00000477169 LRPPRCP42704 1394 aaKnown RBP25.21■■□□□ 1.63
SMARCD3-210ENST00000477169 STK26Q9P289 416 aa25.21■■□□□ 1.63
SMARCD3-210ENST00000477169 TECPR2O15040 1411 aa25.2■■□□□ 1.63
SMARCD3-210ENST00000477169 ABCC11Q96J66 1382 aa25.2■■□□□ 1.63
SMARCD3-210ENST00000477169 LRP6O75581 1613 aa25.2■■□□□ 1.62
SMARCD3-210ENST00000477169 TMEM132EQ6IEE7 984 aa25.2■■□□□ 1.62
SMARCD3-210ENST00000477169 MEX3CQ5U5Q3 659 aaKnown RBP25.19■■□□□ 1.62
SMARCD3-210ENST00000477169 DDX17Q92841 729 aaKnown RBP25.19■■□□□ 1.62
SMARCD3-210ENST00000477169 C14orf93Q9H972 538 aaKnown RBP25.19■■□□□ 1.62
SMARCD3-210ENST00000477169 ORAI2Q96SN7 254 aa25.18■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms