RNA–Protein interactions for RNA: ENST00000476905.6

SSX2IP-206, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 2

Gene SSX2IP, Length 2,272 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-206ENST00000476905 MPHOSPH9Q99550 1183 aa13.48□□□□□ -0.25
SSX2IP-206ENST00000476905 SCAF11Q99590 1463 aaKnown RBP13.48□□□□□ -0.25
SSX2IP-206ENST00000476905 ADGRB3O60242 1522 aa13.48□□□□□ -0.25
SSX2IP-206ENST00000476905 ZFYVE9O95405 1425 aa13.47□□□□□ -0.25
SSX2IP-206ENST00000476905 TMEM131LA2VDJ0 1609 aa13.47□□□□□ -0.25
SSX2IP-206ENST00000476905 CHGAP10645 457 aaKnown RBP13.46□□□□□ -0.25
SSX2IP-206ENST00000476905 NUTM2DQ5VT03 806 aaPredicted RBP13.46□□□□□ -0.25
SSX2IP-206ENST00000476905 POLR1AO95602 1720 aaPredicted RBP13.46□□□□□ -0.25
SSX2IP-206ENST00000476905 KDM5AP29375 1690 aaKnown RBP13.45□□□□□ -0.26
SSX2IP-206ENST00000476905 MYO5BQ9ULV0 1848 aa13.44□□□□□ -0.26
SSX2IP-206ENST00000476905 RIMS2Q9UQ26 1411 aa13.44□□□□□ -0.26
SSX2IP-206ENST00000476905 SLC26A8Q96RN1 970 aa13.43□□□□□ -0.26
SSX2IP-206ENST00000476905 EID1Q9Y6B2 187 aa13.43□□□□□ -0.26
SSX2IP-206ENST00000476905 CLTCL1P53675 1640 aa13.42□□□□□ -0.26
SSX2IP-206ENST00000476905 SPHKAPQ2M3C7 1700 aa13.42□□□□□ -0.26
SSX2IP-206ENST00000476905 IQGAP1P46940 1657 aa13.42□□□□□ -0.26
SSX2IP-206ENST00000476905 TRPM2O94759 1503 aa13.42□□□□□ -0.26
SSX2IP-206ENST00000476905 FBXO41Q8TF61 875 aa13.42□□□□□ -0.26
SSX2IP-206ENST00000476905 STRCP1A6NGW2 1772 aa13.4□□□□□ -0.26
SSX2IP-206ENST00000476905 HRCP23327 699 aa13.39□□□□□ -0.27
SSX2IP-206ENST00000476905 PLEKHG1Q9ULL1 1385 aa13.39□□□□□ -0.27
SSX2IP-206ENST00000476905 ADAMTS13Q76LX8 1427 aa13.38□□□□□ -0.27
SSX2IP-206ENST00000476905 ZNF326Q5BKZ1 582 aaKnown RBP13.36□□□□□ -0.27
SSX2IP-206ENST00000476905 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.36□□□□□ -0.27
SSX2IP-206ENST00000476905 RBM33Q96EV2 1170 aaKnown RBP13.36□□□□□ -0.27
SSX2IP-206ENST00000476905 LRRC7Q96NW7 1537 aa13.35□□□□□ -0.27
SSX2IP-206ENST00000476905 PPP1R15AO75807 674 aaPredicted RBP13.35□□□□□ -0.27
SSX2IP-206ENST00000476905 SPATA31E1Q6ZUB1 1445 aa13.35□□□□□ -0.27
SSX2IP-206ENST00000476905 TBX22Q9Y458 520 aa13.34□□□□□ -0.27
SSX2IP-206ENST00000476905 ANKRD30BQ9BXX2 1392 aa13.34□□□□□ -0.27
SSX2IP-206ENST00000476905 NEXMIFQ5QGS0 1516 aa13.34□□□□□ -0.27
SSX2IP-206ENST00000476905 KCNA6P17658 529 aa13.34□□□□□ -0.27
SSX2IP-206ENST00000476905 HDGFP51858 240 aaKnown RBP13.33□□□□□ -0.28
SSX2IP-206ENST00000476905 BCANQ96GW7 911 aa13.33□□□□□ -0.28
SSX2IP-206ENST00000476905 RGL3Q3MIN7 710 aa13.33□□□□□ -0.28
SSX2IP-206ENST00000476905 CPS1P31327 1500 aa13.33□□□□□ -0.28
SSX2IP-206ENST00000476905 PTPRUQ92729 1446 aa13.32□□□□□ -0.28
SSX2IP-206ENST00000476905 ALKQ9UM73 1620 aa13.32□□□□□ -0.28
SSX2IP-206ENST00000476905 CCDC144AA2RUR9 1427 aa13.32□□□□□ -0.28
SSX2IP-206ENST00000476905 NRXN3Q9Y4C0 1643 aa13.32□□□□□ -0.28
SSX2IP-206ENST00000476905 IQSEC2Q5JU85 1478 aa13.31□□□□□ -0.28
SSX2IP-206ENST00000476905 ACIN1Q9UKV3 1341 aaKnown RBP13.31□□□□□ -0.28
SSX2IP-206ENST00000476905 METP08581 1390 aa13.31□□□□□ -0.28
SSX2IP-206ENST00000476905 ADGRF5Q8IZF2 1346 aa13.3□□□□□ -0.28
SSX2IP-206ENST00000476905 UBAP1LF5GYI3 381 aa13.29□□□□□ -0.28
SSX2IP-206ENST00000476905 TMEM94Q12767 1356 aa13.29□□□□□ -0.28
SSX2IP-206ENST00000476905 RPGRIP1LQ68CZ1 1315 aa13.28□□□□□ -0.28
SSX2IP-206ENST00000476905 MAPK8IP2Q13387 824 aaPredicted RBP13.28□□□□□ -0.28
SSX2IP-206ENST00000476905 KIF1BO60333 1816 aa13.28□□□□□ -0.28
SSX2IP-206ENST00000476905 SETBP1Q9Y6X0 1596 aa13.28□□□□□ -0.28
SSX2IP-206ENST00000476905 PROSER2Q86WR7 435 aaPredicted RBP13.27□□□□□ -0.28
SSX2IP-206ENST00000476905 NWD1Q149M9 1564 aa13.27□□□□□ -0.29
SSX2IP-206ENST00000476905 VGFO15240 615 aaPredicted RBP13.27□□□□□ -0.29
SSX2IP-206ENST00000476905 TRIM26Q12899 539 aaPredicted RBP13.27□□□□□ -0.29
SSX2IP-206ENST00000476905 AMOTL2Q9Y2J4 779 aa13.27□□□□□ -0.29
SSX2IP-206ENST00000476905 XIRP1Q702N8 1843 aaKnown RBP13.27□□□□□ -0.29
SSX2IP-206ENST00000476905 CHD2O14647 1828 aaKnown RBP13.25□□□□□ -0.29
SSX2IP-206ENST00000476905 PIK3R4Q99570 1358 aa13.25□□□□□ -0.29
SSX2IP-206ENST00000476905 PPLO60437 1756 aa13.24□□□□□ -0.29
SSX2IP-206ENST00000476905 PIP4K2BP78356 416 aa13.23□□□□□ -0.29
SSX2IP-206ENST00000476905 DHX57Q6P158 1386 aaKnown RBP13.23□□□□□ -0.29
SSX2IP-206ENST00000476905 NKTRP30414 1462 aaKnown RBP13.23□□□□□ -0.29
SSX2IP-206ENST00000476905 DIP2AQ14689 1571 aa13.23□□□□□ -0.29
SSX2IP-206ENST00000476905 PRKCSHP14314 528 aaPredicted RBP13.22□□□□□ -0.29
SSX2IP-206ENST00000476905 SETD1AO15047 1707 aaKnown RBP13.21□□□□□ -0.29
SSX2IP-206ENST00000476905 TOM1O60784 492 aa13.21□□□□□ -0.29
SSX2IP-206ENST00000476905 TMEM132EQ6IEE7 984 aa13.2□□□□□ -0.3
SSX2IP-206ENST00000476905 SIN3AQ96ST3 1273 aa13.2□□□□□ -0.3
SSX2IP-206ENST00000476905 PIK3C2GO75747 1445 aa13.2□□□□□ -0.3
SSX2IP-206ENST00000476905 IFT172Q9UG01 1749 aa13.2□□□□□ -0.3
SSX2IP-206ENST00000476905 NRXN1Q9ULB1 1477 aa13.2□□□□□ -0.3
SSX2IP-206ENST00000476905 ROBO2Q9HCK4 1378 aa13.19□□□□□ -0.3
SSX2IP-206ENST00000476905 XRN1Q8IZH2 1706 aaKnown RBP13.19□□□□□ -0.3
SSX2IP-206ENST00000476905 SLC4A2P04920 1241 aa13.19□□□□□ -0.3
SSX2IP-206ENST00000476905 CFAP70Q5T0N1 1121 aa13.19□□□□□ -0.3
SSX2IP-206ENST00000476905 ASXL1Q8IXJ9 1541 aa13.19□□□□□ -0.3
SSX2IP-206ENST00000476905 HSPA1LP34931 641 aa13.19□□□□□ -0.3
SSX2IP-206ENST00000476905 C14orf93Q9H972 538 aaKnown RBP13.18□□□□□ -0.3
SSX2IP-206ENST00000476905 DCAF11Q8TEB1 546 aa13.18□□□□□ -0.3
SSX2IP-206ENST00000476905 KDM2AQ9Y2K7 1162 aa13.18□□□□□ -0.3
SSX2IP-206ENST00000476905 SCAF1Q9H7N4 1312 aaKnown RBP13.17□□□□□ -0.3
SSX2IP-206ENST00000476905 MYOM2P54296 1465 aa13.16□□□□□ -0.3
SSX2IP-206ENST00000476905 C19orf44Q9H6X5 657 aa13.15□□□□□ -0.3
SSX2IP-206ENST00000476905 NCOA3Q9Y6Q9 1424 aa13.15□□□□□ -0.3
SSX2IP-206ENST00000476905 SLAIN2Q9P270 581 aa13.15□□□□□ -0.3
SSX2IP-206ENST00000476905 STK26Q9P289 416 aa13.15□□□□□ -0.3
SSX2IP-206ENST00000476905 PRAG1Q86YV5 1406 aa13.14□□□□□ -0.31
SSX2IP-206ENST00000476905 MSH6P52701 1360 aa13.14□□□□□ -0.31
SSX2IP-206ENST00000476905 WAPLQ7Z5K2 1190 aa13.14□□□□□ -0.31
SSX2IP-206ENST00000476905 PLEKHH1Q9ULM0 1364 aa13.14□□□□□ -0.31
SSX2IP-206ENST00000476905 FAM135BQ49AJ0 1406 aa13.13□□□□□ -0.31
SSX2IP-206ENST00000476905 LRPPRCP42704 1394 aaKnown RBP13.13□□□□□ -0.31
SSX2IP-206ENST00000476905 PTCH1Q13635 1447 aa13.12□□□□□ -0.31
SSX2IP-206ENST00000476905 ABCC11Q96J66 1382 aa13.12□□□□□ -0.31
SSX2IP-206ENST00000476905 C14orf37Q86TY3 774 aa13.12□□□□□ -0.31
SSX2IP-206ENST00000476905 L3MBTL2Q969R5 705 aa13.12□□□□□ -0.31
SSX2IP-206ENST00000476905 TECPR2O15040 1411 aa13.11□□□□□ -0.31
SSX2IP-206ENST00000476905 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.11□□□□□ -0.31
SSX2IP-206ENST00000476905 PCGF6Q9BYE7 350 aa13.11□□□□□ -0.31
SSX2IP-206ENST00000476905 YTHDC2Q9H6S0 1430 aaKnown RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms