RNA–Protein interactions for RNA: ENST00000476729.5

FLOT1-209, Transcript of flotillin 1, humanhuman

TSL 2

Gene FLOT1, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FLOT1-209ENST00000476729 CHGAP10645 457 aaKnown RBP23.51■■□□□ 1.35
FLOT1-209ENST00000476729 ITGAEP38570 1179 aa23.51■■□□□ 1.35
FLOT1-209ENST00000476729 PPARGC1BQ86YN6 1023 aaKnown RBP23.49■■□□□ 1.35
FLOT1-209ENST00000476729 ZFYVE9O95405 1425 aa23.49■■□□□ 1.35
FLOT1-209ENST00000476729 RIMS2Q9UQ26 1411 aa23.49■■□□□ 1.35
FLOT1-209ENST00000476729 FAM135BQ49AJ0 1406 aa23.48■■□□□ 1.35
FLOT1-209ENST00000476729 UNC13BO14795 1591 aa23.48■■□□□ 1.35
FLOT1-209ENST00000476729 PLEKHG1Q9ULL1 1385 aa23.47■■□□□ 1.35
FLOT1-209ENST00000476729 ROCK1Q13464 1354 aa23.46■■□□□ 1.35
FLOT1-209ENST00000476729 NUTM2DQ5VT03 806 aaPredicted RBP23.46■■□□□ 1.35
FLOT1-209ENST00000476729 GCC2Q8IWJ2 1684 aa23.45■■□□□ 1.34
FLOT1-209ENST00000476729 NWD1Q149M9 1564 aa23.45■■□□□ 1.34
FLOT1-209ENST00000476729 NKTRP30414 1462 aaKnown RBP23.45■■□□□ 1.34
FLOT1-209ENST00000476729 HDGFP51858 240 aaKnown RBP23.45■■□□□ 1.34
FLOT1-209ENST00000476729 MYO5BQ9ULV0 1848 aa23.45■■□□□ 1.34
FLOT1-209ENST00000476729 TMEM131LA2VDJ0 1609 aa23.44■■□□□ 1.34
FLOT1-209ENST00000476729 NUP155O75694 1391 aa23.42■■□□□ 1.34
FLOT1-209ENST00000476729 MSH6P52701 1360 aa23.42■■□□□ 1.34
FLOT1-209ENST00000476729 E9PCH4 1651 aa23.41■■□□□ 1.34
FLOT1-209ENST00000476729 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.4■■□□□ 1.34
FLOT1-209ENST00000476729 ROBO1Q9Y6N7 1651 aa23.39■■□□□ 1.34
FLOT1-209ENST00000476729 IQGAP3Q86VI3 1631 aa23.38■■□□□ 1.33
FLOT1-209ENST00000476729 RGS17Q9UGC6 210 aaPredicted RBP23.38■■□□□ 1.33
FLOT1-209ENST00000476729 TBX22Q9Y458 520 aa23.38■■□□□ 1.33
FLOT1-209ENST00000476729 SLAIN2Q9P270 581 aa23.36■■□□□ 1.33
FLOT1-209ENST00000476729 C14orf37Q86TY3 774 aa23.35■■□□□ 1.33
FLOT1-209ENST00000476729 ADAMTS13Q76LX8 1427 aa23.34■■□□□ 1.33
FLOT1-209ENST00000476729 CHD2O14647 1828 aaKnown RBP23.34■■□□□ 1.33
FLOT1-209ENST00000476729 DIP2AQ14689 1571 aa23.27■■□□□ 1.32
FLOT1-209ENST00000476729 PIK3R4Q99570 1358 aa23.27■■□□□ 1.31
FLOT1-209ENST00000476729 PHLPP1O60346 1717 aa23.26■■□□□ 1.31
FLOT1-209ENST00000476729 POTEAQ6S8J7 498 aa23.26■■□□□ 1.31
FLOT1-209ENST00000476729 AMOTL2Q9Y2J4 779 aa23.26■■□□□ 1.31
FLOT1-209ENST00000476729 NCOA3Q9Y6Q9 1424 aa23.25■■□□□ 1.31
FLOT1-209ENST00000476729 ZNF326Q5BKZ1 582 aaKnown RBP23.25■■□□□ 1.31
FLOT1-209ENST00000476729 C19orf44Q9H6X5 657 aa23.24■■□□□ 1.31
FLOT1-209ENST00000476729 JCADQ9P266 1359 aa23.24■■□□□ 1.31
FLOT1-209ENST00000476729 PTPRUQ92729 1446 aa23.24■■□□□ 1.31
FLOT1-209ENST00000476729 TRPM2O94759 1503 aa23.23■■□□□ 1.31
FLOT1-209ENST00000476729 ATF3P18847 181 aa23.23■■□□□ 1.31
FLOT1-209ENST00000476729 CADPS2Q86UW7 1296 aa23.22■■□□□ 1.31
FLOT1-209ENST00000476729 SPHKAPQ2M3C7 1700 aa23.2■■□□□ 1.3
FLOT1-209ENST00000476729 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.19■■□□□ 1.3
FLOT1-209ENST00000476729 COL16A1Q07092 1604 aaPredicted RBP23.18■■□□□ 1.3
FLOT1-209ENST00000476729 RRBP1Q9P2E9 1410 aaKnown RBP23.16■■□□□ 1.3
FLOT1-209ENST00000476729 METP08581 1390 aa23.15■■□□□ 1.3
FLOT1-209ENST00000476729 NRXN3Q9Y4C0 1643 aa23.15■■□□□ 1.3
FLOT1-209ENST00000476729 NAIPQ13075 1403 aa23.15■■□□□ 1.3
FLOT1-209ENST00000476729 SETBP1Q9Y6X0 1596 aa23.14■■□□□ 1.3
FLOT1-209ENST00000476729 CLTCL1P53675 1640 aa23.14■■□□□ 1.29
FLOT1-209ENST00000476729 BRINP3Q76B58 766 aa23.13■■□□□ 1.29
FLOT1-209ENST00000476729 MEX3CQ5U5Q3 659 aaKnown RBP23.12■■□□□ 1.29
FLOT1-209ENST00000476729 TRIM52Q96A61 297 aa23.12■■□□□ 1.29
FLOT1-209ENST00000476729 LRP6O75581 1613 aa23.11■■□□□ 1.29
FLOT1-209ENST00000476729 AHDC1Q5TGY3 1603 aaPredicted RBP23.11■■□□□ 1.29
FLOT1-209ENST00000476729 XRN1Q8IZH2 1706 aaKnown RBP23.11■■□□□ 1.29
FLOT1-209ENST00000476729 SPATA31A6Q5VVP1 1343 aa23.1■■□□□ 1.29
FLOT1-209ENST00000476729 NEXMIFQ5QGS0 1516 aa23.09■■□□□ 1.29
FLOT1-209ENST00000476729 DCCP43146 1447 aa23.08■■□□□ 1.29
FLOT1-209ENST00000476729 MST1RQ04912 1400 aa23.06■■□□□ 1.28
FLOT1-209ENST00000476729 ASXL1Q8IXJ9 1541 aa23.05■■□□□ 1.28
FLOT1-209ENST00000476729 NUTM2BA6NNL0 878 aaPredicted RBP23.05■■□□□ 1.28
FLOT1-209ENST00000476729 NUTM2EB1AL46 878 aaPredicted RBP23.05■■□□□ 1.28
FLOT1-209ENST00000476729 NUTM2AQ8IVF1 878 aaPredicted RBP23.05■■□□□ 1.28
FLOT1-209ENST00000476729 SLC4A1APQ9BWU0 796 aaKnown RBP23.03■■□□□ 1.28
FLOT1-209ENST00000476729 SHPRHQ149N8 1683 aa23.03■■□□□ 1.28
FLOT1-209ENST00000476729 HFM1A2PYH4 1435 aa23.02■■□□□ 1.28
FLOT1-209ENST00000476729 ADGRL3Q9HAR2 1447 aa23.02■■□□□ 1.28
FLOT1-209ENST00000476729 DDX17Q92841 729 aaKnown RBP23.02■■□□□ 1.28
FLOT1-209ENST00000476729 SETD1AO15047 1707 aaKnown RBP23.02■■□□□ 1.28
FLOT1-209ENST00000476729 KIF1BO60333 1816 aa23.01■■□□□ 1.27
FLOT1-209ENST00000476729 VGFO15240 615 aaPredicted RBP23■■□□□ 1.27
FLOT1-209ENST00000476729 ZNF772Q68DY9 489 aaPredicted RBP23■■□□□ 1.27
FLOT1-209ENST00000476729 SETD5Q9C0A6 1442 aa22.98■■□□□ 1.27
FLOT1-209ENST00000476729 FOXD1Q16676 465 aa22.97■■□□□ 1.27
FLOT1-209ENST00000476729 NALCNQ8IZF0 1738 aa22.96■■□□□ 1.27
FLOT1-209ENST00000476729 LRRC59Q96AG4 307 aaKnown RBP22.96■■□□□ 1.27
FLOT1-209ENST00000476729 ROBO2Q9HCK4 1378 aa22.96■■□□□ 1.27
FLOT1-209ENST00000476729 NHSL1Q5SYE7 1610 aa22.94■■□□□ 1.26
FLOT1-209ENST00000476729 RPGRIP1LQ68CZ1 1315 aa22.94■■□□□ 1.26
FLOT1-209ENST00000476729 PTCH1Q13635 1447 aa22.93■■□□□ 1.26
FLOT1-209ENST00000476729 C1orf167Q5SNV9 1468 aa22.92■■□□□ 1.26
FLOT1-209ENST00000476729 AFF2P51816 1311 aa22.92■■□□□ 1.26
FLOT1-209ENST00000476729 RXRBP28702 533 aa22.91■■□□□ 1.26
FLOT1-209ENST00000476729 PNPLA6Q8IY17 1366 aa22.9■■□□□ 1.26
FLOT1-209ENST00000476729 C8orf37Q96NL8 207 aa22.9■■□□□ 1.26
FLOT1-209ENST00000476729 ORAI2Q96SN7 254 aa22.9■■□□□ 1.26
FLOT1-209ENST00000476729 RGL3Q3MIN7 710 aa22.87■■□□□ 1.25
FLOT1-209ENST00000476729 PPLO60437 1756 aa22.86■■□□□ 1.25
FLOT1-209ENST00000476729 ADGRF5Q8IZF2 1346 aa22.86■■□□□ 1.25
FLOT1-209ENST00000476729 CCDC144AA2RUR9 1427 aa22.85■■□□□ 1.25
FLOT1-209ENST00000476729 ADAMTS2O95450 1211 aa22.85■■□□□ 1.25
FLOT1-209ENST00000476729 PRAG1Q86YV5 1406 aa22.84■■□□□ 1.25
FLOT1-209ENST00000476729 UPF1Q92900 1129 aaKnown RBP eCLIP22.84■■□□□ 1.255e-7■□□□□ 9.3
FLOT1-209ENST00000476729 MPHOSPH9Q99550 1183 aa22.83■■□□□ 1.25
FLOT1-209ENST00000476729 STK26Q9P289 416 aa22.83■■□□□ 1.25
FLOT1-209ENST00000476729 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
FLOT1-209ENST00000476729 NGLY1Q96IV0 654 aa22.8■■□□□ 1.24
FLOT1-209ENST00000476729 QTRT2Q9H974 415 aaKnown RBP22.8■■□□□ 1.24
FLOT1-209ENST00000476729 ESCO1Q5FWF5 840 aa22.79■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms