RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 CCDC144AA2RUR9 1427 aa19.37■□□□□ 0.69
HLA-DPA1-246ENST00000476642 PCGF6Q9BYE7 350 aa19.37■□□□□ 0.69
HLA-DPA1-246ENST00000476642 CLTCL1P53675 1640 aa19.36■□□□□ 0.69
HLA-DPA1-246ENST00000476642 SLIT1O75093 1534 aa19.35■□□□□ 0.69
HLA-DPA1-246ENST00000476642 MED14O60244 1454 aa19.35■□□□□ 0.69
HLA-DPA1-246ENST00000476642 CHGAP10645 457 aaKnown RBP19.35■□□□□ 0.69
HLA-DPA1-246ENST00000476642 FOXD1Q16676 465 aa19.35■□□□□ 0.69
HLA-DPA1-246ENST00000476642 EID1Q9Y6B2 187 aa19.35■□□□□ 0.69
HLA-DPA1-246ENST00000476642 MYO5BQ9ULV0 1848 aa19.34■□□□□ 0.69
HLA-DPA1-246ENST00000476642 TMEM2Q9UHN6 1383 aa19.33■□□□□ 0.69
HLA-DPA1-246ENST00000476642 HSPA1LP34931 641 aa19.33■□□□□ 0.68
HLA-DPA1-246ENST00000476642 ARHGAP23Q9P227 1491 aa19.33■□□□□ 0.68
HLA-DPA1-246ENST00000476642 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.31■□□□□ 0.68
HLA-DPA1-246ENST00000476642 IQGAP1P46940 1657 aa19.3■□□□□ 0.68
HLA-DPA1-246ENST00000476642 SCAF11Q99590 1463 aaKnown RBP19.3■□□□□ 0.68
HLA-DPA1-246ENST00000476642 TXNDC2Q86VQ3 553 aa19.3■□□□□ 0.68
HLA-DPA1-246ENST00000476642 ANKRD30BQ9BXX2 1392 aa19.3■□□□□ 0.68
HLA-DPA1-246ENST00000476642 ZNF326Q5BKZ1 582 aaKnown RBP19.28■□□□□ 0.68
HLA-DPA1-246ENST00000476642 RPGRIP1LQ68CZ1 1315 aa19.26■□□□□ 0.67
HLA-DPA1-246ENST00000476642 RIMS2Q9UQ26 1411 aa19.26■□□□□ 0.67
HLA-DPA1-246ENST00000476642 PPP1R15AO75807 674 aaPredicted RBP19.25■□□□□ 0.67
HLA-DPA1-246ENST00000476642 LTKP29376 864 aa19.25■□□□□ 0.67
HLA-DPA1-246ENST00000476642 ZFYVE9O95405 1425 aa19.25■□□□□ 0.67
HLA-DPA1-246ENST00000476642 DHX57Q6P158 1386 aaKnown RBP19.24■□□□□ 0.67
HLA-DPA1-246ENST00000476642 SENP3Q9H4L4 574 aaPredicted RBP19.23■□□□□ 0.67
HLA-DPA1-246ENST00000476642 LRRC7Q96NW7 1537 aa19.22■□□□□ 0.67
HLA-DPA1-246ENST00000476642 SPATA31E1Q6ZUB1 1445 aa19.21■□□□□ 0.67
HLA-DPA1-246ENST00000476642 NEXMIFQ5QGS0 1516 aa19.2■□□□□ 0.66
HLA-DPA1-246ENST00000476642 VGFO15240 615 aaPredicted RBP19.2■□□□□ 0.66
HLA-DPA1-246ENST00000476642 PHF23Q9BUL5 403 aaPredicted RBP19.2■□□□□ 0.66
HLA-DPA1-246ENST00000476642 PLEKHG1Q9ULL1 1385 aa19.19■□□□□ 0.66
HLA-DPA1-246ENST00000476642 PPLO60437 1756 aa19.19■□□□□ 0.66
HLA-DPA1-246ENST00000476642 BCANQ96GW7 911 aa19.19■□□□□ 0.66
HLA-DPA1-246ENST00000476642 RGL3Q3MIN7 710 aa19.17■□□□□ 0.66
HLA-DPA1-246ENST00000476642 STAC3Q96MF2 364 aa19.17■□□□□ 0.66
HLA-DPA1-246ENST00000476642 IFT172Q9UG01 1749 aa19.17■□□□□ 0.66
HLA-DPA1-246ENST00000476642 MED1Q15648 1581 aaPredicted RBP19.16■□□□□ 0.66
HLA-DPA1-246ENST00000476642 DIP2AQ14689 1571 aa19.15■□□□□ 0.66
HLA-DPA1-246ENST00000476642 STRCP1A6NGW2 1772 aa19.15■□□□□ 0.66
HLA-DPA1-246ENST00000476642 CLSPNQ9HAW4 1339 aa19.13■□□□□ 0.65
HLA-DPA1-246ENST00000476642 ALKQ9UM73 1620 aa19.12■□□□□ 0.65
HLA-DPA1-246ENST00000476642 SETBP1Q9Y6X0 1596 aa19.12■□□□□ 0.65
HLA-DPA1-246ENST00000476642 NUTM2DQ5VT03 806 aaPredicted RBP19.12■□□□□ 0.65
HLA-DPA1-246ENST00000476642 KCNA6P17658 529 aa19.11■□□□□ 0.65
HLA-DPA1-246ENST00000476642 SLC26A8Q96RN1 970 aa19.11■□□□□ 0.65
HLA-DPA1-246ENST00000476642 TBX22Q9Y458 520 aa19.11■□□□□ 0.65
HLA-DPA1-246ENST00000476642 MYOM2P54296 1465 aa19.1■□□□□ 0.65
HLA-DPA1-246ENST00000476642 PROSER2Q86WR7 435 aaPredicted RBP19.1■□□□□ 0.65
HLA-DPA1-246ENST00000476642 PIK3R4Q99570 1358 aa19.08■□□□□ 0.65
HLA-DPA1-246ENST00000476642 TMEM94Q12767 1356 aa19.07■□□□□ 0.64
HLA-DPA1-246ENST00000476642 NEUROD1Q13562 356 aa19.06■□□□□ 0.64
HLA-DPA1-246ENST00000476642 DCAF11Q8TEB1 546 aa19.06■□□□□ 0.64
HLA-DPA1-246ENST00000476642 NRXN3Q9Y4C0 1643 aa19.06■□□□□ 0.64
HLA-DPA1-246ENST00000476642 ADAMTS13Q76LX8 1427 aa19.06■□□□□ 0.64
HLA-DPA1-246ENST00000476642 LAMC1P11047 1609 aa19.05■□□□□ 0.64
HLA-DPA1-246ENST00000476642 SIN3AQ96ST3 1273 aa19.05■□□□□ 0.64
HLA-DPA1-246ENST00000476642 CCER1Q8TC90 406 aaPredicted RBP19.04■□□□□ 0.64
HLA-DPA1-246ENST00000476642 CHD2O14647 1828 aaKnown RBP19.04■□□□□ 0.64
HLA-DPA1-246ENST00000476642 NRXN1Q9ULB1 1477 aa19.03■□□□□ 0.64
HLA-DPA1-246ENST00000476642 PIK3C2GO75747 1445 aa19.03■□□□□ 0.64
HLA-DPA1-246ENST00000476642 ADGRF5Q8IZF2 1346 aa19.02■□□□□ 0.64
HLA-DPA1-246ENST00000476642 FAM135BQ49AJ0 1406 aa19.02■□□□□ 0.64
HLA-DPA1-246ENST00000476642 RBM33Q96EV2 1170 aaKnown RBP19.02■□□□□ 0.64
HLA-DPA1-246ENST00000476642 TONSLQ96HA7 1378 aa19.02■□□□□ 0.64
HLA-DPA1-246ENST00000476642 NWD1Q149M9 1564 aa19.02■□□□□ 0.63
HLA-DPA1-246ENST00000476642 KDM2AQ9Y2K7 1162 aa19.01■□□□□ 0.63
HLA-DPA1-246ENST00000476642 MSH6P52701 1360 aa19■□□□□ 0.63
HLA-DPA1-246ENST00000476642 NKTRP30414 1462 aaKnown RBP19■□□□□ 0.63
HLA-DPA1-246ENST00000476642 SETD1AO15047 1707 aaKnown RBP19■□□□□ 0.63
HLA-DPA1-246ENST00000476642 XIRP1Q702N8 1843 aaKnown RBP18.98■□□□□ 0.63
HLA-DPA1-246ENST00000476642 L3MBTL2Q969R5 705 aa18.98■□□□□ 0.63
HLA-DPA1-246ENST00000476642 TIMELESSQ9UNS1 1208 aa18.98■□□□□ 0.63
HLA-DPA1-246ENST00000476642 C14orf93Q9H972 538 aaKnown RBP18.97■□□□□ 0.63
HLA-DPA1-246ENST00000476642 C14orf37Q86TY3 774 aa18.96■□□□□ 0.63
HLA-DPA1-246ENST00000476642 KIAA1210Q9ULL0 1709 aa18.96■□□□□ 0.63
HLA-DPA1-246ENST00000476642 AMOTL2Q9Y2J4 779 aa18.95■□□□□ 0.62
HLA-DPA1-246ENST00000476642 METP08581 1390 aa18.94■□□□□ 0.62
HLA-DPA1-246ENST00000476642 SLAIN2Q9P270 581 aa18.94■□□□□ 0.62
HLA-DPA1-246ENST00000476642 XRN1Q8IZH2 1706 aaKnown RBP18.94■□□□□ 0.62
HLA-DPA1-246ENST00000476642 PRAG1Q86YV5 1406 aa18.92■□□□□ 0.62
HLA-DPA1-246ENST00000476642 CFAP70Q5T0N1 1121 aa18.92■□□□□ 0.62
HLA-DPA1-246ENST00000476642 NCOA3Q9Y6Q9 1424 aa18.91■□□□□ 0.62
HLA-DPA1-246ENST00000476642 ROBO1Q9Y6N7 1651 aa18.91■□□□□ 0.62
HLA-DPA1-246ENST00000476642 PTPRUQ92729 1446 aa18.91■□□□□ 0.62
HLA-DPA1-246ENST00000476642 KNDC1Q76NI1 1749 aa18.9■□□□□ 0.62
HLA-DPA1-246ENST00000476642 LRPPRCP42704 1394 aaKnown RBP18.89■□□□□ 0.61
HLA-DPA1-246ENST00000476642 PTCH1Q13635 1447 aa18.89■□□□□ 0.61
HLA-DPA1-246ENST00000476642 ABCC11Q96J66 1382 aa18.88■□□□□ 0.61
HLA-DPA1-246ENST00000476642 YTHDC2Q9H6S0 1430 aaKnown RBP18.88■□□□□ 0.61
HLA-DPA1-246ENST00000476642 TECPR2O15040 1411 aa18.87■□□□□ 0.61
HLA-DPA1-246ENST00000476642 RGS17Q9UGC6 210 aaPredicted RBP18.87■□□□□ 0.61
HLA-DPA1-246ENST00000476642 ASXL1Q8IXJ9 1541 aa18.86■□□□□ 0.61
HLA-DPA1-246ENST00000476642 ATF3P18847 181 aa18.86■□□□□ 0.61
HLA-DPA1-246ENST00000476642 TMEM132EQ6IEE7 984 aa18.86■□□□□ 0.61
HLA-DPA1-246ENST00000476642 CADPS2Q86UW7 1296 aa18.86■□□□□ 0.61
HLA-DPA1-246ENST00000476642 SIRT1Q96EB6 747 aa18.86■□□□□ 0.61
HLA-DPA1-246ENST00000476642 TRPM1Q7Z4N2 1603 aa18.85■□□□□ 0.61
HLA-DPA1-246ENST00000476642 ADGRB1O14514 1584 aa18.85■□□□□ 0.61
HLA-DPA1-246ENST00000476642 JCADQ9P266 1359 aa18.84■□□□□ 0.61
HLA-DPA1-246ENST00000476642 C19orf44Q9H6X5 657 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms