RNA–Protein interactions for RNA: ENST00000476467.1

PSMB4-204, Transcript of proteasome subunit beta 4, humanhuman

TSL 2

Gene PSMB4, Length 2,067 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMB4-204ENST00000476467 DCAF11Q8TEB1 546 aa18.99■□□□□ 0.63
PSMB4-204ENST00000476467 ZFYVE9O95405 1425 aa18.98■□□□□ 0.63
PSMB4-204ENST00000476467 STAC3Q96MF2 364 aa18.98■□□□□ 0.63
PSMB4-204ENST00000476467 TMEM2Q9UHN6 1383 aa18.98■□□□□ 0.63
PSMB4-204ENST00000476467 RIMS2Q9UQ26 1411 aa18.98■□□□□ 0.63
PSMB4-204ENST00000476467 ARHGAP23Q9P227 1491 aa18.98■□□□□ 0.63
PSMB4-204ENST00000476467 THEMISQ8N1K5 641 aaPredicted RBP18.97■□□□□ 0.63
PSMB4-204ENST00000476467 PPP1R15AO75807 674 aaPredicted RBP18.95■□□□□ 0.62
PSMB4-204ENST00000476467 KDM2AQ9Y2K7 1162 aa18.94■□□□□ 0.62
PSMB4-204ENST00000476467 NRXN1Q9ULB1 1477 aa18.94■□□□□ 0.62
PSMB4-204ENST00000476467 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.94■□□□□ 0.62
PSMB4-204ENST00000476467 LMTK3Q96Q04 1460 aa18.94■□□□□ 0.62
PSMB4-204ENST00000476467 PRAG1Q86YV5 1406 aa18.93■□□□□ 0.62
PSMB4-204ENST00000476467 VGFO15240 615 aaPredicted RBP18.92■□□□□ 0.62
PSMB4-204ENST00000476467 HDGFP51858 240 aaKnown RBP18.92■□□□□ 0.62
PSMB4-204ENST00000476467 SCAF11Q99590 1463 aaKnown RBP18.9■□□□□ 0.62
PSMB4-204ENST00000476467 ADGRF5Q8IZF2 1346 aa18.9■□□□□ 0.62
PSMB4-204ENST00000476467 PIK3C2GO75747 1445 aa18.9■□□□□ 0.62
PSMB4-204ENST00000476467 NUTM2DQ5VT03 806 aaPredicted RBP18.89■□□□□ 0.62
PSMB4-204ENST00000476467 EID1Q9Y6B2 187 aa18.89■□□□□ 0.62
PSMB4-204ENST00000476467 NBPF8Q3BBV2 869 aa18.88■□□□□ 0.61
PSMB4-204ENST00000476467 TXNDC2Q86VQ3 553 aa18.88■□□□□ 0.61
PSMB4-204ENST00000476467 POLR1AO95602 1720 aaPredicted RBP18.88■□□□□ 0.61
PSMB4-204ENST00000476467 KIAA1210Q9ULL0 1709 aa18.87■□□□□ 0.61
PSMB4-204ENST00000476467 LTKP29376 864 aa18.87■□□□□ 0.61
PSMB4-204ENST00000476467 TRPM1Q7Z4N2 1603 aa18.87■□□□□ 0.61
PSMB4-204ENST00000476467 PLEKHG1Q9ULL1 1385 aa18.87■□□□□ 0.61
PSMB4-204ENST00000476467 SETBP1Q9Y6X0 1596 aa18.86■□□□□ 0.61
PSMB4-204ENST00000476467 RALGAPBQ86X10 1494 aa18.86■□□□□ 0.61
PSMB4-204ENST00000476467 LAMC1P11047 1609 aa18.86■□□□□ 0.61
PSMB4-204ENST00000476467 ANKLE2Q86XL3 938 aa18.85■□□□□ 0.61
PSMB4-204ENST00000476467 NRXN3Q9Y4C0 1643 aa18.84■□□□□ 0.61
PSMB4-204ENST00000476467 IQGAP1P46940 1657 aa18.84■□□□□ 0.61
PSMB4-204ENST00000476467 HSPA2P54652 639 aa18.82■□□□□ 0.6
PSMB4-204ENST00000476467 MED14O60244 1454 aa18.81■□□□□ 0.6
PSMB4-204ENST00000476467 ALKQ9UM73 1620 aa18.81■□□□□ 0.6
PSMB4-204ENST00000476467 SETD1AO15047 1707 aaKnown RBP18.81■□□□□ 0.6
PSMB4-204ENST00000476467 C14orf93Q9H972 538 aaKnown RBP18.8■□□□□ 0.6
PSMB4-204ENST00000476467 DIP2AQ14689 1571 aa18.8■□□□□ 0.6
PSMB4-204ENST00000476467 ZNF316A6NFI3 1004 aaPredicted RBP18.8■□□□□ 0.6
PSMB4-204ENST00000476467 NPHP4O75161 1426 aaPredicted RBP18.79■□□□□ 0.6
PSMB4-204ENST00000476467 ADAMTS13Q76LX8 1427 aa18.79■□□□□ 0.6
PSMB4-204ENST00000476467 CFAP70Q5T0N1 1121 aa18.79■□□□□ 0.6
PSMB4-204ENST00000476467 DIEXFQ68CQ4 756 aaKnown RBP18.79■□□□□ 0.6
PSMB4-204ENST00000476467 ROCK2O75116 1388 aaKnown RBP18.79■□□□□ 0.6
PSMB4-204ENST00000476467 GPRASP1Q5JY77 1395 aa18.79■□□□□ 0.6
PSMB4-204ENST00000476467 NCKAP5LQ9HCH0 1330 aa18.78■□□□□ 0.6
PSMB4-204ENST00000476467 ADGRB1O14514 1584 aa18.77■□□□□ 0.59
PSMB4-204ENST00000476467 STRCQ7RTU9 1775 aa18.77■□□□□ 0.59
PSMB4-204ENST00000476467 ASXL1Q8IXJ9 1541 aa18.77■□□□□ 0.59
PSMB4-204ENST00000476467 BCANQ96GW7 911 aa18.77■□□□□ 0.59
PSMB4-204ENST00000476467 SENP3Q9H4L4 574 aaPredicted RBP18.77■□□□□ 0.59
PSMB4-204ENST00000476467 NBPF1Q3BBV0 1214 aa18.75■□□□□ 0.59
PSMB4-204ENST00000476467 AEBP2Q6ZN18 517 aaPredicted RBP18.75■□□□□ 0.59
PSMB4-204ENST00000476467 CARD11Q9BXL7 1154 aa18.72■□□□□ 0.59
PSMB4-204ENST00000476467 TBX22Q9Y458 520 aa18.72■□□□□ 0.59
PSMB4-204ENST00000476467 SLC26A8Q96RN1 970 aa18.72■□□□□ 0.59
PSMB4-204ENST00000476467 METP08581 1390 aa18.71■□□□□ 0.58
PSMB4-204ENST00000476467 PIK3R4Q99570 1358 aa18.69■□□□□ 0.58
PSMB4-204ENST00000476467 TMEM132EQ6IEE7 984 aa18.69■□□□□ 0.58
PSMB4-204ENST00000476467 YTHDC2Q9H6S0 1430 aaKnown RBP18.69■□□□□ 0.58
PSMB4-204ENST00000476467 LRPPRCP42704 1394 aaKnown RBP18.68■□□□□ 0.58
PSMB4-204ENST00000476467 KNDC1Q76NI1 1749 aa18.68■□□□□ 0.58
PSMB4-204ENST00000476467 USP47Q96K76 1375 aa18.67■□□□□ 0.58
PSMB4-204ENST00000476467 XRN1Q8IZH2 1706 aaKnown RBP18.65■□□□□ 0.58
PSMB4-204ENST00000476467 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
PSMB4-204ENST00000476467 DLC1Q96QB1 1528 aa18.65■□□□□ 0.58
PSMB4-204ENST00000476467 ARHGEF28Q8N1W1 1705 aaKnown RBP18.65■□□□□ 0.58
PSMB4-204ENST00000476467 CHD2O14647 1828 aaKnown RBP18.64■□□□□ 0.58
PSMB4-204ENST00000476467 TECPR2O15040 1411 aa18.64■□□□□ 0.57
PSMB4-204ENST00000476467 EIF3AQ14152 1382 aaKnown RBP18.64■□□□□ 0.57
PSMB4-204ENST00000476467 ABCC11Q96J66 1382 aa18.64■□□□□ 0.57
PSMB4-204ENST00000476467 CPS1P31327 1500 aa18.64■□□□□ 0.57
PSMB4-204ENST00000476467 EIF4G2P78344 907 aaKnown RBP eCLIP18.64■□□□□ 0.57
PSMB4-204ENST00000476467 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
PSMB4-204ENST00000476467 DMRT2Q9Y5R5 561 aa18.63■□□□□ 0.57
PSMB4-204ENST00000476467 STK26Q9P289 416 aa18.62■□□□□ 0.57
PSMB4-204ENST00000476467 TRAK1Q9UPV9 953 aa18.62■□□□□ 0.57
PSMB4-204ENST00000476467 HSPA5P11021 654 aaKnown RBP18.61■□□□□ 0.57
PSMB4-204ENST00000476467 PTCH1Q13635 1447 aa18.6■□□□□ 0.57
PSMB4-204ENST00000476467 AMOTL2Q9Y2J4 779 aa18.59■□□□□ 0.57
PSMB4-204ENST00000476467 FAM135BQ49AJ0 1406 aa18.59■□□□□ 0.57
PSMB4-204ENST00000476467 KCNA6P17658 529 aa18.58■□□□□ 0.56
PSMB4-204ENST00000476467 SIRT1Q96EB6 747 aa18.58■□□□□ 0.56
PSMB4-204ENST00000476467 QRICH2Q9H0J4 1663 aa18.57■□□□□ 0.56
PSMB4-204ENST00000476467 ROBO2Q9HCK4 1378 aa18.57■□□□□ 0.56
PSMB4-204ENST00000476467 NKTRP30414 1462 aaKnown RBP18.57■□□□□ 0.56
PSMB4-204ENST00000476467 CENPJQ9HC77 1338 aaPredicted RBP18.57■□□□□ 0.56
PSMB4-204ENST00000476467 ST20-MTHFSA0A0A6YYL1 179 aa18.56■□□□□ 0.56
PSMB4-204ENST00000476467 STRCP1A6NGW2 1772 aa18.55■□□□□ 0.56
PSMB4-204ENST00000476467 SBNO2Q9Y2G9 1366 aa18.55■□□□□ 0.56
PSMB4-204ENST00000476467 PRAM1Q96QH2 718 aa18.54■□□□□ 0.56
PSMB4-204ENST00000476467 POGKQ9P215 609 aa18.53■□□□□ 0.56
PSMB4-204ENST00000476467 PLEKHH1Q9ULM0 1364 aa18.53■□□□□ 0.56
PSMB4-204ENST00000476467 HIRIP3Q9BW71 556 aaPredicted RBP18.52■□□□□ 0.56
PSMB4-204ENST00000476467 TESK2Q96S53 571 aa18.51■□□□□ 0.55
PSMB4-204ENST00000476467 WAPLQ7Z5K2 1190 aa18.51■□□□□ 0.55
PSMB4-204ENST00000476467 ZNF335Q9H4Z2 1342 aaPredicted RBP18.5■□□□□ 0.55
PSMB4-204ENST00000476467 SAFB2Q14151 953 aaKnown RBP eCLIP18.49■□□□□ 0.55
PSMB4-204ENST00000476467 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms