RNA–Protein interactions for RNA: ENST00000476267.1

MRPL55-228, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 3

Gene MRPL55, Length 169 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-228ENST00000476267 NKTRP30414 1462 aaKnown RBP20.35■□□□□ 0.85
MRPL55-228ENST00000476267 KCNA6P17658 529 aa20.33■□□□□ 0.85
MRPL55-228ENST00000476267 TMEM94Q12767 1356 aa20.33■□□□□ 0.84
MRPL55-228ENST00000476267 CHD2O14647 1828 aaKnown RBP20.32■□□□□ 0.84
MRPL55-228ENST00000476267 FAM135BQ49AJ0 1406 aa20.31■□□□□ 0.84
MRPL55-228ENST00000476267 SLC26A8Q96RN1 970 aa20.31■□□□□ 0.84
MRPL55-228ENST00000476267 PLEKHG1Q9ULL1 1385 aa20.3■□□□□ 0.84
MRPL55-228ENST00000476267 ROBO1Q9Y6N7 1651 aa20.29■□□□□ 0.84
MRPL55-228ENST00000476267 RIMS2Q9UQ26 1411 aa20.28■□□□□ 0.84
MRPL55-228ENST00000476267 SENP3Q9H4L4 574 aaPredicted RBP20.24■□□□□ 0.83
MRPL55-228ENST00000476267 DIP2AQ14689 1571 aa20.24■□□□□ 0.83
MRPL55-228ENST00000476267 ADAMTS13Q76LX8 1427 aa20.23■□□□□ 0.83
MRPL55-228ENST00000476267 PROSER2Q86WR7 435 aaPredicted RBP20.22■□□□□ 0.83
MRPL55-228ENST00000476267 RBM33Q96EV2 1170 aaKnown RBP20.22■□□□□ 0.83
MRPL55-228ENST00000476267 SPHKAPQ2M3C7 1700 aa20.2■□□□□ 0.82
MRPL55-228ENST00000476267 PHF23Q9BUL5 403 aaPredicted RBP20.19■□□□□ 0.82
MRPL55-228ENST00000476267 TBX22Q9Y458 520 aa20.19■□□□□ 0.82
MRPL55-228ENST00000476267 NRXN3Q9Y4C0 1643 aa20.18■□□□□ 0.82
MRPL55-228ENST00000476267 RGS17Q9UGC6 210 aaPredicted RBP20.18■□□□□ 0.82
MRPL55-228ENST00000476267 NUP155O75694 1391 aa20.18■□□□□ 0.82
MRPL55-228ENST00000476267 MSH6P52701 1360 aa20.17■□□□□ 0.82
MRPL55-228ENST00000476267 NCOA3Q9Y6Q9 1424 aa20.17■□□□□ 0.82
MRPL55-228ENST00000476267 HDGFP51858 240 aaKnown RBP20.16■□□□□ 0.82
MRPL55-228ENST00000476267 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.16■□□□□ 0.82
MRPL55-228ENST00000476267 PHLPP1O60346 1717 aa20.16■□□□□ 0.82
MRPL55-228ENST00000476267 PPP1R15AO75807 674 aaPredicted RBP20.15■□□□□ 0.82
MRPL55-228ENST00000476267 BCANQ96GW7 911 aa20.15■□□□□ 0.82
MRPL55-228ENST00000476267 PIK3R4Q99570 1358 aa20.15■□□□□ 0.82
MRPL55-228ENST00000476267 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.14■□□□□ 0.81
MRPL55-228ENST00000476267 COL16A1Q07092 1604 aaPredicted RBP20.14■□□□□ 0.81
MRPL55-228ENST00000476267 TRPM2O94759 1503 aa20.14■□□□□ 0.81
MRPL55-228ENST00000476267 SETBP1Q9Y6X0 1596 aa20.13■□□□□ 0.81
MRPL55-228ENST00000476267 RRBP1Q9P2E9 1410 aaKnown RBP20.13■□□□□ 0.81
MRPL55-228ENST00000476267 XRN1Q8IZH2 1706 aaKnown RBP20.13■□□□□ 0.81
MRPL55-228ENST00000476267 PTPRUQ92729 1446 aa20.12■□□□□ 0.81
MRPL55-228ENST00000476267 CHGAP10645 457 aaKnown RBP20.11■□□□□ 0.81
MRPL55-228ENST00000476267 ITGAEP38570 1179 aa20.11■□□□□ 0.81
MRPL55-228ENST00000476267 NUTM2DQ5VT03 806 aaPredicted RBP20.11■□□□□ 0.81
MRPL55-228ENST00000476267 SLAIN2Q9P270 581 aa20.11■□□□□ 0.81
MRPL55-228ENST00000476267 CLTCL1P53675 1640 aa20.1■□□□□ 0.81
MRPL55-228ENST00000476267 PPARGC1BQ86YN6 1023 aaKnown RBP20.1■□□□□ 0.81
MRPL55-228ENST00000476267 AHDC1Q5TGY3 1603 aaPredicted RBP20.08■□□□□ 0.8
MRPL55-228ENST00000476267 NAIPQ13075 1403 aa20.07■□□□□ 0.8
MRPL55-228ENST00000476267 NEXMIFQ5QGS0 1516 aa20.07■□□□□ 0.8
MRPL55-228ENST00000476267 JCADQ9P266 1359 aa20.04■□□□□ 0.8
MRPL55-228ENST00000476267 SHPRHQ149N8 1683 aa20.03■□□□□ 0.8
MRPL55-228ENST00000476267 DCCP43146 1447 aa20.02■□□□□ 0.8
MRPL55-228ENST00000476267 POTEAQ6S8J7 498 aa20.02■□□□□ 0.8
MRPL55-228ENST00000476267 C19orf44Q9H6X5 657 aa20.02■□□□□ 0.8
MRPL55-228ENST00000476267 AMOTL2Q9Y2J4 779 aa20.02■□□□□ 0.8
MRPL55-228ENST00000476267 KIF1BO60333 1816 aa20.02■□□□□ 0.79
MRPL55-228ENST00000476267 SETD1AO15047 1707 aaKnown RBP20.02■□□□□ 0.79
MRPL55-228ENST00000476267 LRP6O75581 1613 aa20.01■□□□□ 0.79
MRPL55-228ENST00000476267 METP08581 1390 aa20■□□□□ 0.79
MRPL55-228ENST00000476267 CADPS2Q86UW7 1296 aa20■□□□□ 0.79
MRPL55-228ENST00000476267 NALCNQ8IZF0 1738 aa19.99■□□□□ 0.79
MRPL55-228ENST00000476267 NHSL1Q5SYE7 1610 aa19.98■□□□□ 0.79
MRPL55-228ENST00000476267 HFM1A2PYH4 1435 aa19.98■□□□□ 0.79
MRPL55-228ENST00000476267 ASXL1Q8IXJ9 1541 aa19.97■□□□□ 0.79
MRPL55-228ENST00000476267 MST1RQ04912 1400 aa19.96■□□□□ 0.79
MRPL55-228ENST00000476267 C14orf37Q86TY3 774 aa19.96■□□□□ 0.79
MRPL55-228ENST00000476267 ATF3P18847 181 aa19.95■□□□□ 0.78
MRPL55-228ENST00000476267 BRINP3Q76B58 766 aa19.94■□□□□ 0.78
MRPL55-228ENST00000476267 SPATA31A6Q5VVP1 1343 aa19.94■□□□□ 0.78
MRPL55-228ENST00000476267 ADGRL3Q9HAR2 1447 aa19.93■□□□□ 0.78
MRPL55-228ENST00000476267 ZNF326Q5BKZ1 582 aaKnown RBP19.93■□□□□ 0.78
MRPL55-228ENST00000476267 PPLO60437 1756 aa19.93■□□□□ 0.78
MRPL55-228ENST00000476267 PRAG1Q86YV5 1406 aa19.92■□□□□ 0.78
MRPL55-228ENST00000476267 SETD5Q9C0A6 1442 aa19.9■□□□□ 0.78
MRPL55-228ENST00000476267 LAMC1P11047 1609 aa19.9■□□□□ 0.78
MRPL55-228ENST00000476267 PTCH1Q13635 1447 aa19.89■□□□□ 0.77
MRPL55-228ENST00000476267 IFT172Q9UG01 1749 aa19.84■□□□□ 0.77
MRPL55-228ENST00000476267 ROBO2Q9HCK4 1378 aa19.83■□□□□ 0.77
MRPL55-228ENST00000476267 RPGRIP1LQ68CZ1 1315 aa19.82■□□□□ 0.76
MRPL55-228ENST00000476267 C1orf167Q5SNV9 1468 aa19.82■□□□□ 0.76
MRPL55-228ENST00000476267 VGFO15240 615 aaPredicted RBP19.82■□□□□ 0.76
MRPL55-228ENST00000476267 TRIM52Q96A61 297 aa19.81■□□□□ 0.76
MRPL55-228ENST00000476267 SLC4A1APQ9BWU0 796 aaKnown RBP19.81■□□□□ 0.76
MRPL55-228ENST00000476267 ZNF772Q68DY9 489 aaPredicted RBP19.79■□□□□ 0.76
MRPL55-228ENST00000476267 PNPLA6Q8IY17 1366 aa19.79■□□□□ 0.76
MRPL55-228ENST00000476267 SPATA31E1Q6ZUB1 1445 aa19.78■□□□□ 0.76
MRPL55-228ENST00000476267 MEX3CQ5U5Q3 659 aaKnown RBP19.78■□□□□ 0.76
MRPL55-228ENST00000476267 DDX17Q92841 729 aaKnown RBP19.77■□□□□ 0.76
MRPL55-228ENST00000476267 CDC42BPGQ6DT37 1551 aa19.77■□□□□ 0.76
MRPL55-228ENST00000476267 CDK12Q9NYV4 1490 aaPredicted RBP19.76■□□□□ 0.75
MRPL55-228ENST00000476267 LRRC59Q96AG4 307 aaKnown RBP19.76■□□□□ 0.75
MRPL55-228ENST00000476267 FOXD1Q16676 465 aa19.75■□□□□ 0.75
MRPL55-228ENST00000476267 KNDC1Q76NI1 1749 aa19.74■□□□□ 0.75
MRPL55-228ENST00000476267 COL22A1Q8NFW1 1626 aaPredicted RBP19.74■□□□□ 0.75
MRPL55-228ENST00000476267 TECPR2O15040 1411 aa19.74■□□□□ 0.75
MRPL55-228ENST00000476267 NUTM2BA6NNL0 878 aaPredicted RBP19.73■□□□□ 0.75
MRPL55-228ENST00000476267 NUTM2EB1AL46 878 aaPredicted RBP19.73■□□□□ 0.75
MRPL55-228ENST00000476267 NUTM2AQ8IVF1 878 aaPredicted RBP19.73■□□□□ 0.75
MRPL55-228ENST00000476267 CCDC144AA2RUR9 1427 aa19.73■□□□□ 0.75
MRPL55-228ENST00000476267 SOS2Q07890 1332 aaPredicted RBP19.73■□□□□ 0.75
MRPL55-228ENST00000476267 AFF2P51816 1311 aa19.72■□□□□ 0.75
MRPL55-228ENST00000476267 ADGRF5Q8IZF2 1346 aa19.71■□□□□ 0.75
MRPL55-228ENST00000476267 ORAI2Q96SN7 254 aa19.7■□□□□ 0.74
MRPL55-228ENST00000476267 PIK3C2GO75747 1445 aa19.69■□□□□ 0.74
MRPL55-228ENST00000476267 MPHOSPH9Q99550 1183 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms