RNA–Protein interactions for RNA: ENST00000476109.5

SUPT20H-213, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 769 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-213ENST00000476109 TMEM94Q12767 1356 aa30.3■■■□□ 2.44
SUPT20H-213ENST00000476109 NWD1Q149M9 1564 aa30.3■■■□□ 2.44
SUPT20H-213ENST00000476109 SLC52A1Q9NWF4 448 aa30.3■■■□□ 2.44
SUPT20H-213ENST00000476109 IQGAP3Q86VI3 1631 aa30.28■■■□□ 2.44
SUPT20H-213ENST00000476109 ROCK1Q13464 1354 aa30.27■■■□□ 2.44
SUPT20H-213ENST00000476109 KCNA6P17658 529 aa30.26■■■□□ 2.43
SUPT20H-213ENST00000476109 RIMS2Q9UQ26 1411 aa30.24■■■□□ 2.43
SUPT20H-213ENST00000476109 ITGAEP38570 1179 aa30.24■■■□□ 2.43
SUPT20H-213ENST00000476109 NKTRP30414 1462 aaKnown RBP30.2■■■□□ 2.43
SUPT20H-213ENST00000476109 CHD2O14647 1828 aaKnown RBP30.19■■■□□ 2.42
SUPT20H-213ENST00000476109 PLEKHG1Q9ULL1 1385 aa30.19■■■□□ 2.42
SUPT20H-213ENST00000476109 PROSER2Q86WR7 435 aaPredicted RBP30.19■■■□□ 2.42
SUPT20H-213ENST00000476109 BCANQ96GW7 911 aa30.19■■■□□ 2.42
SUPT20H-213ENST00000476109 ROBO1Q9Y6N7 1651 aa30.19■■■□□ 2.42
SUPT20H-213ENST00000476109 NUTM2DQ5VT03 806 aaPredicted RBP30.17■■■□□ 2.42
SUPT20H-213ENST00000476109 CHGAP10645 457 aaKnown RBP30.16■■■□□ 2.42
SUPT20H-213ENST00000476109 FAM135BQ49AJ0 1406 aa30.15■■■□□ 2.42
SUPT20H-213ENST00000476109 NUP155O75694 1391 aa30.15■■■□□ 2.42
SUPT20H-213ENST00000476109 PPP1R15AO75807 674 aaPredicted RBP30.14■■■□□ 2.42
SUPT20H-213ENST00000476109 PHF23Q9BUL5 403 aaPredicted RBP30.14■■■□□ 2.42
SUPT20H-213ENST00000476109 ADAMTS13Q76LX8 1427 aa30.12■■■□□ 2.41
SUPT20H-213ENST00000476109 SPHKAPQ2M3C7 1700 aa30.06■■■□□ 2.4
SUPT20H-213ENST00000476109 RGS17Q9UGC6 210 aaPredicted RBP30.06■■■□□ 2.4
SUPT20H-213ENST00000476109 MSH6P52701 1360 aa30.05■■■□□ 2.4
SUPT20H-213ENST00000476109 TBX22Q9Y458 520 aa30.03■■■□□ 2.4
SUPT20H-213ENST00000476109 DIP2AQ14689 1571 aa30.02■■■□□ 2.4
SUPT20H-213ENST00000476109 NRXN3Q9Y4C0 1643 aa30.01■■■□□ 2.39
SUPT20H-213ENST00000476109 ABCF1Q8NE71 845 aaKnown RBP eCLIP30■■■□□ 2.39
SUPT20H-213ENST00000476109 PHLPP1O60346 1717 aa29.99■■■□□ 2.39
SUPT20H-213ENST00000476109 PTPRUQ92729 1446 aa29.99■■■□□ 2.39
SUPT20H-213ENST00000476109 HDGFP51858 240 aaKnown RBP29.99■■■□□ 2.39
SUPT20H-213ENST00000476109 RRBP1Q9P2E9 1410 aaKnown RBP29.97■■■□□ 2.39
SUPT20H-213ENST00000476109 SLAIN2Q9P270 581 aa29.97■■■□□ 2.39
SUPT20H-213ENST00000476109 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.96■■■□□ 2.39
SUPT20H-213ENST00000476109 CLTCL1P53675 1640 aa29.96■■■□□ 2.39
SUPT20H-213ENST00000476109 TRPM2O94759 1503 aa29.95■■■□□ 2.38
SUPT20H-213ENST00000476109 COL16A1Q07092 1604 aaPredicted RBP29.93■■■□□ 2.38
SUPT20H-213ENST00000476109 NAIPQ13075 1403 aa29.92■■■□□ 2.38
SUPT20H-213ENST00000476109 XRN1Q8IZH2 1706 aaKnown RBP29.91■■■□□ 2.38
SUPT20H-213ENST00000476109 SETBP1Q9Y6X0 1596 aa29.9■■■□□ 2.38
SUPT20H-213ENST00000476109 PIK3R4Q99570 1358 aa29.9■■■□□ 2.38
SUPT20H-213ENST00000476109 C14orf37Q86TY3 774 aa29.88■■■□□ 2.37
SUPT20H-213ENST00000476109 NCOA3Q9Y6Q9 1424 aa29.88■■■□□ 2.37
SUPT20H-213ENST00000476109 AMOTL2Q9Y2J4 779 aa29.87■■■□□ 2.37
SUPT20H-213ENST00000476109 NEXMIFQ5QGS0 1516 aa29.86■■■□□ 2.37
SUPT20H-213ENST00000476109 POTEAQ6S8J7 498 aa29.86■■■□□ 2.37
SUPT20H-213ENST00000476109 METP08581 1390 aa29.84■■■□□ 2.37
SUPT20H-213ENST00000476109 ZNF326Q5BKZ1 582 aaKnown RBP29.83■■■□□ 2.37
SUPT20H-213ENST00000476109 JCADQ9P266 1359 aa29.81■■■□□ 2.36
SUPT20H-213ENST00000476109 AHDC1Q5TGY3 1603 aaPredicted RBP29.81■■■□□ 2.36
SUPT20H-213ENST00000476109 KIF1BO60333 1816 aa29.8■■■□□ 2.36
SUPT20H-213ENST00000476109 C19orf44Q9H6X5 657 aa29.8■■■□□ 2.36
SUPT20H-213ENST00000476109 LRP6O75581 1613 aa29.8■■■□□ 2.36
SUPT20H-213ENST00000476109 CADPS2Q86UW7 1296 aa29.77■■■□□ 2.36
SUPT20H-213ENST00000476109 ATF3P18847 181 aa29.76■■■□□ 2.35
SUPT20H-213ENST00000476109 HFM1A2PYH4 1435 aa29.76■■■□□ 2.35
SUPT20H-213ENST00000476109 SETD1AO15047 1707 aaKnown RBP29.74■■■□□ 2.35
SUPT20H-213ENST00000476109 NALCNQ8IZF0 1738 aa29.74■■■□□ 2.35
SUPT20H-213ENST00000476109 BRINP3Q76B58 766 aa29.73■■■□□ 2.35
SUPT20H-213ENST00000476109 SHPRHQ149N8 1683 aa29.72■■■□□ 2.35
SUPT20H-213ENST00000476109 MST1RQ04912 1400 aa29.71■■■□□ 2.35
SUPT20H-213ENST00000476109 ASXL1Q8IXJ9 1541 aa29.71■■■□□ 2.35
SUPT20H-213ENST00000476109 DCCP43146 1447 aa29.71■■■□□ 2.35
SUPT20H-213ENST00000476109 TRIM52Q96A61 297 aa29.7■■■□□ 2.35
SUPT20H-213ENST00000476109 NHSL1Q5SYE7 1610 aa29.67■■■□□ 2.34
SUPT20H-213ENST00000476109 ADGRL3Q9HAR2 1447 aa29.66■■■□□ 2.34
SUPT20H-213ENST00000476109 PPLO60437 1756 aa29.64■■■□□ 2.34
SUPT20H-213ENST00000476109 FOXD1Q16676 465 aa29.63■■■□□ 2.33
SUPT20H-213ENST00000476109 DDX17Q92841 729 aaKnown RBP29.62■■■□□ 2.33
SUPT20H-213ENST00000476109 SLC4A1APQ9BWU0 796 aaKnown RBP29.62■■■□□ 2.33
SUPT20H-213ENST00000476109 SPATA31A6Q5VVP1 1343 aa29.62■■■□□ 2.33
SUPT20H-213ENST00000476109 ROBO2Q9HCK4 1378 aa29.59■■■□□ 2.33
SUPT20H-213ENST00000476109 PTCH1Q13635 1447 aa29.56■■■□□ 2.32
SUPT20H-213ENST00000476109 MEX3CQ5U5Q3 659 aaKnown RBP29.56■■■□□ 2.32
SUPT20H-213ENST00000476109 SETD5Q9C0A6 1442 aa29.55■■■□□ 2.32
SUPT20H-213ENST00000476109 NUTM2BA6NNL0 878 aaPredicted RBP29.54■■■□□ 2.32
SUPT20H-213ENST00000476109 NUTM2EB1AL46 878 aaPredicted RBP29.54■■■□□ 2.32
SUPT20H-213ENST00000476109 NUTM2AQ8IVF1 878 aaPredicted RBP29.54■■■□□ 2.32
SUPT20H-213ENST00000476109 C1orf167Q5SNV9 1468 aa29.52■■■□□ 2.32
SUPT20H-213ENST00000476109 VGFO15240 615 aaPredicted RBP29.51■■■□□ 2.31
SUPT20H-213ENST00000476109 PRAG1Q86YV5 1406 aa29.5■■■□□ 2.31
SUPT20H-213ENST00000476109 IFT172Q9UG01 1749 aa29.48■■■□□ 2.31
SUPT20H-213ENST00000476109 RPGRIP1LQ68CZ1 1315 aa29.47■■■□□ 2.31
SUPT20H-213ENST00000476109 PNPLA6Q8IY17 1366 aa29.47■■■□□ 2.31
SUPT20H-213ENST00000476109 ADGRF5Q8IZF2 1346 aa29.46■■■□□ 2.31
SUPT20H-213ENST00000476109 LAMC1P11047 1609 aa29.46■■■□□ 2.31
SUPT20H-213ENST00000476109 SPATA31E1Q6ZUB1 1445 aa29.45■■■□□ 2.31
SUPT20H-213ENST00000476109 ORAI2Q96SN7 254 aa29.44■■■□□ 2.3
SUPT20H-213ENST00000476109 ZNF772Q68DY9 489 aaPredicted RBP29.43■■■□□ 2.3
SUPT20H-213ENST00000476109 CCDC144AA2RUR9 1427 aa29.43■■■□□ 2.3
SUPT20H-213ENST00000476109 RGL3Q3MIN7 710 aa29.41■■■□□ 2.3
SUPT20H-213ENST00000476109 LRRC59Q96AG4 307 aaKnown RBP29.41■■■□□ 2.3
SUPT20H-213ENST00000476109 AFF2P51816 1311 aa29.41■■■□□ 2.3
SUPT20H-213ENST00000476109 MPHOSPH9Q99550 1183 aa29.4■■■□□ 2.3
SUPT20H-213ENST00000476109 CDC42BPGQ6DT37 1551 aa29.37■■■□□ 2.29
SUPT20H-213ENST00000476109 C8orf37Q96NL8 207 aa29.35■■■□□ 2.29
SUPT20H-213ENST00000476109 SOS2Q07890 1332 aaPredicted RBP29.34■■■□□ 2.29
SUPT20H-213ENST00000476109 STK26Q9P289 416 aa29.33■■■□□ 2.29
SUPT20H-213ENST00000476109 PLEKHH1Q9ULM0 1364 aa29.33■■■□□ 2.29
SUPT20H-213ENST00000476109 KNDC1Q76NI1 1749 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.9 ms