RNA–Protein interactions for RNA: ENST00000476086.6

NR1H3-219, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2

Gene NR1H3, Length 588 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-219ENST00000476086 HDGFP51858 240 aaKnown RBP27.21■■□□□ 1.95
NR1H3-219ENST00000476086 THEMISQ8N1K5 641 aaPredicted RBP27.21■■□□□ 1.95
NR1H3-219ENST00000476086 NEXMIFQ5QGS0 1516 aa27.2■■□□□ 1.94
NR1H3-219ENST00000476086 MYOM2P54296 1465 aa27.19■■□□□ 1.94
NR1H3-219ENST00000476086 KDM2AQ9Y2K7 1162 aa27.18■■□□□ 1.94
NR1H3-219ENST00000476086 VGFO15240 615 aaPredicted RBP27.17■■□□□ 1.94
NR1H3-219ENST00000476086 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.16■■□□□ 1.94
NR1H3-219ENST00000476086 RIMS2Q9UQ26 1411 aa27.15■■□□□ 1.94
NR1H3-219ENST00000476086 TMEM2Q9UHN6 1383 aa27.14■■□□□ 1.94
NR1H3-219ENST00000476086 ZFYVE9O95405 1425 aa27.14■■□□□ 1.93
NR1H3-219ENST00000476086 SLIT1O75093 1534 aa27.13■■□□□ 1.93
NR1H3-219ENST00000476086 PRAG1Q86YV5 1406 aa27.1■■□□□ 1.93
NR1H3-219ENST00000476086 EID1Q9Y6B2 187 aa27.1■■□□□ 1.93
NR1H3-219ENST00000476086 ARHGAP23Q9P227 1491 aa27.1■■□□□ 1.93
NR1H3-219ENST00000476086 NRXN1Q9ULB1 1477 aa27.08■■□□□ 1.93
NR1H3-219ENST00000476086 KIAA1210Q9ULL0 1709 aa27.07■■□□□ 1.92
NR1H3-219ENST00000476086 ADGRF5Q8IZF2 1346 aa27.05■■□□□ 1.92
NR1H3-219ENST00000476086 LAMC1P11047 1609 aa27.05■■□□□ 1.92
NR1H3-219ENST00000476086 TRPM1Q7Z4N2 1603 aa27.05■■□□□ 1.92
NR1H3-219ENST00000476086 PIK3C2GO75747 1445 aa27.03■■□□□ 1.92
NR1H3-219ENST00000476086 NBPF8Q3BBV2 869 aa27.03■■□□□ 1.92
NR1H3-219ENST00000476086 TXNDC2Q86VQ3 553 aa27.03■■□□□ 1.92
NR1H3-219ENST00000476086 NUTM2DQ5VT03 806 aaPredicted RBP27.02■■□□□ 1.92
NR1H3-219ENST00000476086 SCAF11Q99590 1463 aaKnown RBP27.01■■□□□ 1.91
NR1H3-219ENST00000476086 ANKLE2Q86XL3 938 aa27.01■■□□□ 1.91
NR1H3-219ENST00000476086 POLR1AO95602 1720 aaPredicted RBP27.01■■□□□ 1.91
NR1H3-219ENST00000476086 RALGAPBQ86X10 1494 aa27■■□□□ 1.91
NR1H3-219ENST00000476086 LMTK3Q96Q04 1460 aa27■■□□□ 1.91
NR1H3-219ENST00000476086 PLEKHG1Q9ULL1 1385 aa26.97■■□□□ 1.91
NR1H3-219ENST00000476086 SETBP1Q9Y6X0 1596 aa26.97■■□□□ 1.91
NR1H3-219ENST00000476086 LTKP29376 864 aa26.96■■□□□ 1.91
NR1H3-219ENST00000476086 ROCK2O75116 1388 aaKnown RBP26.95■■□□□ 1.9
NR1H3-219ENST00000476086 BCANQ96GW7 911 aa26.94■■□□□ 1.9
NR1H3-219ENST00000476086 C14orf93Q9H972 538 aaKnown RBP26.94■■□□□ 1.9
NR1H3-219ENST00000476086 IQGAP1P46940 1657 aa26.93■■□□□ 1.9
NR1H3-219ENST00000476086 ALKQ9UM73 1620 aa26.92■■□□□ 1.9
NR1H3-219ENST00000476086 NRXN3Q9Y4C0 1643 aa26.91■■□□□ 1.9
NR1H3-219ENST00000476086 CFAP70Q5T0N1 1121 aa26.91■■□□□ 1.9
NR1H3-219ENST00000476086 DIP2AQ14689 1571 aa26.9■■□□□ 1.9
NR1H3-219ENST00000476086 GPRASP1Q5JY77 1395 aa26.89■■□□□ 1.9
NR1H3-219ENST00000476086 MED14O60244 1454 aa26.88■■□□□ 1.89
NR1H3-219ENST00000476086 CARD11Q9BXL7 1154 aa26.88■■□□□ 1.89
NR1H3-219ENST00000476086 SETD1AO15047 1707 aaKnown RBP26.87■■□□□ 1.89
NR1H3-219ENST00000476086 NBPF1Q3BBV0 1214 aa26.86■■□□□ 1.89
NR1H3-219ENST00000476086 NPHP4O75161 1426 aaPredicted RBP26.85■■□□□ 1.89
NR1H3-219ENST00000476086 HSPA2P54652 639 aa26.85■■□□□ 1.89
NR1H3-219ENST00000476086 ADGRB1O14514 1584 aa26.83■■□□□ 1.89
NR1H3-219ENST00000476086 ADAMTS13Q76LX8 1427 aa26.82■■□□□ 1.88
NR1H3-219ENST00000476086 SENP3Q9H4L4 574 aaPredicted RBP26.82■■□□□ 1.88
NR1H3-219ENST00000476086 TBX22Q9Y458 520 aa26.82■■□□□ 1.88
NR1H3-219ENST00000476086 NCKAP5LQ9HCH0 1330 aa26.82■■□□□ 1.88
NR1H3-219ENST00000476086 AEBP2Q6ZN18 517 aaPredicted RBP26.81■■□□□ 1.88
NR1H3-219ENST00000476086 EIF4G2P78344 907 aaKnown RBP eCLIP26.8■■□□□ 1.88
NR1H3-219ENST00000476086 STRCQ7RTU9 1775 aa26.79■■□□□ 1.88
NR1H3-219ENST00000476086 ASXL1Q8IXJ9 1541 aa26.77■■□□□ 1.88
NR1H3-219ENST00000476086 EIF3AQ14152 1382 aaKnown RBP26.77■■□□□ 1.88
NR1H3-219ENST00000476086 USP47Q96K76 1375 aa26.77■■□□□ 1.88
NR1H3-219ENST00000476086 PIK3R4Q99570 1358 aa26.77■■□□□ 1.88
NR1H3-219ENST00000476086 TMEM132EQ6IEE7 984 aa26.77■■□□□ 1.88
NR1H3-219ENST00000476086 SLC26A8Q96RN1 970 aa26.77■■□□□ 1.88
NR1H3-219ENST00000476086 YTHDC2Q9H6S0 1430 aaKnown RBP26.74■■□□□ 1.87
NR1H3-219ENST00000476086 KNDC1Q76NI1 1749 aa26.73■■□□□ 1.87
NR1H3-219ENST00000476086 METP08581 1390 aa26.73■■□□□ 1.87
NR1H3-219ENST00000476086 LRPPRCP42704 1394 aaKnown RBP26.72■■□□□ 1.87
NR1H3-219ENST00000476086 DMRT2Q9Y5R5 561 aa26.71■■□□□ 1.87
NR1H3-219ENST00000476086 ARHGEF28Q8N1W1 1705 aaKnown RBP26.7■■□□□ 1.87
NR1H3-219ENST00000476086 CHD2O14647 1828 aaKnown RBP26.7■■□□□ 1.87
NR1H3-219ENST00000476086 ABCC11Q96J66 1382 aa26.7■■□□□ 1.86
NR1H3-219ENST00000476086 HSPA5P11021 654 aaKnown RBP26.69■■□□□ 1.86
NR1H3-219ENST00000476086 TRAK1Q9UPV9 953 aa26.69■■□□□ 1.86
NR1H3-219ENST00000476086 DLC1Q96QB1 1528 aa26.69■■□□□ 1.86
NR1H3-219ENST00000476086 STK26Q9P289 416 aa26.68■■□□□ 1.86
NR1H3-219ENST00000476086 TECPR2O15040 1411 aa26.66■■□□□ 1.86
NR1H3-219ENST00000476086 CPS1P31327 1500 aa26.65■■□□□ 1.86
NR1H3-219ENST00000476086 SLC24A1O60721 1099 aa26.65■■□□□ 1.86
NR1H3-219ENST00000476086 XRN1Q8IZH2 1706 aaKnown RBP26.65■■□□□ 1.86
NR1H3-219ENST00000476086 SIRT1Q96EB6 747 aa26.64■■□□□ 1.86
NR1H3-219ENST00000476086 ST20-MTHFSA0A0A6YYL1 179 aa26.63■■□□□ 1.85
NR1H3-219ENST00000476086 AMOTL2Q9Y2J4 779 aa26.63■■□□□ 1.85
NR1H3-219ENST00000476086 QRICH2Q9H0J4 1663 aa26.62■■□□□ 1.85
NR1H3-219ENST00000476086 FAM135BQ49AJ0 1406 aa26.62■■□□□ 1.85
NR1H3-219ENST00000476086 PTPRUQ92729 1446 aa26.62■■□□□ 1.85
NR1H3-219ENST00000476086 CENPJQ9HC77 1338 aaPredicted RBP26.62■■□□□ 1.85
NR1H3-219ENST00000476086 NWD1Q149M9 1564 aa26.6■■□□□ 1.85
NR1H3-219ENST00000476086 POGKQ9P215 609 aa26.6■■□□□ 1.85
NR1H3-219ENST00000476086 PTCH1Q13635 1447 aa26.59■■□□□ 1.85
NR1H3-219ENST00000476086 KCNA6P17658 529 aa26.59■■□□□ 1.85
NR1H3-219ENST00000476086 ZNF316A6NFI3 1004 aaPredicted RBP26.58■■□□□ 1.85
NR1H3-219ENST00000476086 SBNO2Q9Y2G9 1366 aa26.58■■□□□ 1.84
NR1H3-219ENST00000476086 PRAM1Q96QH2 718 aa26.57■■□□□ 1.84
NR1H3-219ENST00000476086 HIRIP3Q9BW71 556 aaPredicted RBP26.56■■□□□ 1.84
NR1H3-219ENST00000476086 NKTRP30414 1462 aaKnown RBP26.55■■□□□ 1.84
NR1H3-219ENST00000476086 ROBO2Q9HCK4 1378 aa26.53■■□□□ 1.84
NR1H3-219ENST00000476086 TESK2Q96S53 571 aa26.52■■□□□ 1.84
NR1H3-219ENST00000476086 TMF1P82094 1093 aa26.51■■□□□ 1.83
NR1H3-219ENST00000476086 WAPLQ7Z5K2 1190 aa26.49■■□□□ 1.83
NR1H3-219ENST00000476086 SAFB2Q14151 953 aaKnown RBP eCLIP26.48■■□□□ 1.83
NR1H3-219ENST00000476086 CDCA8Q53HL2 280 aa26.48■■□□□ 1.83
NR1H3-219ENST00000476086 STRCP1A6NGW2 1772 aa26.48■■□□□ 1.83
NR1H3-219ENST00000476086 PLEKHH1Q9ULM0 1364 aa26.46■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms