RNA–Protein interactions for RNA: ENST00000476019.1

GBF1-202, Transcript of golgi brefeldin A resistant guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene GBF1, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GBF1-202ENST00000476019 ZNF335Q9H4Z2 1342 aaPredicted RBP11.53□□□□□ -0.56
GBF1-202ENST00000476019 NPHP4O75161 1426 aaPredicted RBP11.52□□□□□ -0.56
GBF1-202ENST00000476019 RIMS2Q9UQ26 1411 aa11.52□□□□□ -0.56
GBF1-202ENST00000476019 SCAF11Q99590 1463 aaKnown RBP11.52□□□□□ -0.56
GBF1-202ENST00000476019 PPLO60437 1756 aa11.52□□□□□ -0.57
GBF1-202ENST00000476019 PCGF6Q9BYE7 350 aa11.52□□□□□ -0.57
GBF1-202ENST00000476019 SETD1AO15047 1707 aaKnown RBP11.52□□□□□ -0.57
GBF1-202ENST00000476019 CHGAP10645 457 aaKnown RBP11.51□□□□□ -0.57
GBF1-202ENST00000476019 TXNDC2Q86VQ3 553 aa11.51□□□□□ -0.57
GBF1-202ENST00000476019 ADAMTS13Q76LX8 1427 aa11.51□□□□□ -0.57
GBF1-202ENST00000476019 XIRP1Q702N8 1843 aaKnown RBP11.5□□□□□ -0.57
GBF1-202ENST00000476019 ANKLE2Q86XL3 938 aa11.49□□□□□ -0.57
GBF1-202ENST00000476019 SLC26A8Q96RN1 970 aa11.49□□□□□ -0.57
GBF1-202ENST00000476019 SIN3AQ96ST3 1273 aa11.49□□□□□ -0.57
GBF1-202ENST00000476019 PTPRUQ92729 1446 aa11.48□□□□□ -0.57
GBF1-202ENST00000476019 ALKQ9UM73 1620 aa11.47□□□□□ -0.57
GBF1-202ENST00000476019 ADGRF5Q8IZF2 1346 aa11.47□□□□□ -0.57
GBF1-202ENST00000476019 ASXL1Q8IXJ9 1541 aa11.46□□□□□ -0.57
GBF1-202ENST00000476019 CCDC144AA2RUR9 1427 aa11.46□□□□□ -0.57
GBF1-202ENST00000476019 PLEKHG1Q9ULL1 1385 aa11.46□□□□□ -0.57
GBF1-202ENST00000476019 RGL3Q3MIN7 710 aa11.46□□□□□ -0.57
GBF1-202ENST00000476019 STAG3Q9UJ98 1225 aa11.46□□□□□ -0.57
GBF1-202ENST00000476019 SETBP1Q9Y6X0 1596 aa11.45□□□□□ -0.58
GBF1-202ENST00000476019 CHD2O14647 1828 aaKnown RBP11.45□□□□□ -0.58
GBF1-202ENST00000476019 METP08581 1390 aa11.44□□□□□ -0.58
GBF1-202ENST00000476019 RBM33Q96EV2 1170 aaKnown RBP11.44□□□□□ -0.58
GBF1-202ENST00000476019 ZNF326Q5BKZ1 582 aaKnown RBP11.43□□□□□ -0.58
GBF1-202ENST00000476019 NRXN1Q9ULB1 1477 aa11.43□□□□□ -0.58
GBF1-202ENST00000476019 NWD1Q149M9 1564 aa11.42□□□□□ -0.58
GBF1-202ENST00000476019 LRRC7Q96NW7 1537 aa11.42□□□□□ -0.58
GBF1-202ENST00000476019 XRN1Q8IZH2 1706 aaKnown RBP11.4□□□□□ -0.58
GBF1-202ENST00000476019 DMRT2Q9Y5R5 561 aa11.4□□□□□ -0.58
GBF1-202ENST00000476019 EID1Q9Y6B2 187 aa11.4□□□□□ -0.58
GBF1-202ENST00000476019 PIK3C2GO75747 1445 aa11.4□□□□□ -0.58
GBF1-202ENST00000476019 CERKQ8TCT0 537 aa11.39□□□□□ -0.59
GBF1-202ENST00000476019 KCNA6P17658 529 aa11.38□□□□□ -0.59
GBF1-202ENST00000476019 TBX22Q9Y458 520 aa11.38□□□□□ -0.59
GBF1-202ENST00000476019 MYOM2P54296 1465 aa11.38□□□□□ -0.59
GBF1-202ENST00000476019 RPGRIP1LQ68CZ1 1315 aa11.37□□□□□ -0.59
GBF1-202ENST00000476019 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.37□□□□□ -0.59
GBF1-202ENST00000476019 ADGRB1O14514 1584 aa11.37□□□□□ -0.59
GBF1-202ENST00000476019 DIP2AQ14689 1571 aa11.37□□□□□ -0.59
GBF1-202ENST00000476019 ACIN1Q9UKV3 1341 aaKnown RBP11.36□□□□□ -0.59
GBF1-202ENST00000476019 PPP1R15AO75807 674 aaPredicted RBP11.36□□□□□ -0.59
GBF1-202ENST00000476019 NEUROD1Q13562 356 aa11.36□□□□□ -0.59
GBF1-202ENST00000476019 CFAP70Q5T0N1 1121 aa11.36□□□□□ -0.59
GBF1-202ENST00000476019 TMEM132EQ6IEE7 984 aa11.36□□□□□ -0.59
GBF1-202ENST00000476019 DCAF11Q8TEB1 546 aa11.36□□□□□ -0.59
GBF1-202ENST00000476019 L3MBTL2Q969R5 705 aa11.36□□□□□ -0.59
GBF1-202ENST00000476019 KDM2AQ9Y2K7 1162 aa11.36□□□□□ -0.59
GBF1-202ENST00000476019 ROBO2Q9HCK4 1378 aa11.34□□□□□ -0.59
GBF1-202ENST00000476019 NBPF8Q3BBV2 869 aa11.34□□□□□ -0.59
GBF1-202ENST00000476019 AMOTL2Q9Y2J4 779 aa11.34□□□□□ -0.59
GBF1-202ENST00000476019 CPS1P31327 1500 aa11.34□□□□□ -0.59
GBF1-202ENST00000476019 PLEKHH1Q9ULM0 1364 aa11.33□□□□□ -0.6
GBF1-202ENST00000476019 NALCNQ8IZF0 1738 aa11.33□□□□□ -0.6
GBF1-202ENST00000476019 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.33□□□□□ -0.6
GBF1-202ENST00000476019 VGFO15240 615 aaPredicted RBP11.33□□□□□ -0.6
GBF1-202ENST00000476019 BCANQ96GW7 911 aa11.33□□□□□ -0.6
GBF1-202ENST00000476019 C14orf93Q9H972 538 aaKnown RBP11.33□□□□□ -0.6
GBF1-202ENST00000476019 TMEM94Q12767 1356 aa11.32□□□□□ -0.6
GBF1-202ENST00000476019 NBPF1Q3BBV0 1214 aa11.32□□□□□ -0.6
GBF1-202ENST00000476019 PRAG1Q86YV5 1406 aa11.32□□□□□ -0.6
GBF1-202ENST00000476019 ILDR1Q86SU0 546 aaPredicted RBP11.31□□□□□ -0.6
GBF1-202ENST00000476019 NKTRP30414 1462 aaKnown RBP11.31□□□□□ -0.6
GBF1-202ENST00000476019 TRPM1Q7Z4N2 1603 aa11.31□□□□□ -0.6
GBF1-202ENST00000476019 PIK3R4Q99570 1358 aa11.3□□□□□ -0.6
GBF1-202ENST00000476019 KNDC1Q76NI1 1749 aa11.3□□□□□ -0.6
GBF1-202ENST00000476019 HDGFP51858 240 aaKnown RBP11.29□□□□□ -0.6
GBF1-202ENST00000476019 WAPLQ7Z5K2 1190 aa11.29□□□□□ -0.6
GBF1-202ENST00000476019 YTHDC2Q9H6S0 1430 aaKnown RBP11.28□□□□□ -0.6
GBF1-202ENST00000476019 IQSEC2Q5JU85 1478 aa11.28□□□□□ -0.6
GBF1-202ENST00000476019 PROSER2Q86WR7 435 aaPredicted RBP11.28□□□□□ -0.6
GBF1-202ENST00000476019 LAMC1P11047 1609 aa11.27□□□□□ -0.6
GBF1-202ENST00000476019 TECPR2O15040 1411 aa11.27□□□□□ -0.6
GBF1-202ENST00000476019 ARHGEF28Q8N1W1 1705 aaKnown RBP11.27□□□□□ -0.61
GBF1-202ENST00000476019 KIAA1210Q9ULL0 1709 aa11.27□□□□□ -0.61
GBF1-202ENST00000476019 STK26Q9P289 416 aa11.27□□□□□ -0.61
GBF1-202ENST00000476019 LRPPRCP42704 1394 aaKnown RBP11.27□□□□□ -0.61
GBF1-202ENST00000476019 PTCH1Q13635 1447 aa11.26□□□□□ -0.61
GBF1-202ENST00000476019 ABCC11Q96J66 1382 aa11.25□□□□□ -0.61
GBF1-202ENST00000476019 FBXO41Q8TF61 875 aa11.24□□□□□ -0.61
GBF1-202ENST00000476019 TRAK1Q9UPV9 953 aa11.23□□□□□ -0.61
GBF1-202ENST00000476019 USP32Q8NFA0 1604 aa11.23□□□□□ -0.61
GBF1-202ENST00000476019 RGPD8O14715 1765 aaPredicted RBP11.23□□□□□ -0.61
GBF1-202ENST00000476019 UBAP1LF5GYI3 381 aa11.22□□□□□ -0.61
GBF1-202ENST00000476019 DLC1Q96QB1 1528 aa11.22□□□□□ -0.61
GBF1-202ENST00000476019 ADGRL3Q9HAR2 1447 aa11.22□□□□□ -0.61
GBF1-202ENST00000476019 ROBO1Q9Y6N7 1651 aa11.22□□□□□ -0.61
GBF1-202ENST00000476019 MST1RQ04912 1400 aa11.21□□□□□ -0.61
GBF1-202ENST00000476019 SAFB2Q14151 953 aaKnown RBP eCLIP11.21□□□□□ -0.61
GBF1-202ENST00000476019 NCOA3Q9Y6Q9 1424 aa11.2□□□□□ -0.62
GBF1-202ENST00000476019 PIP4K2BP78356 416 aa11.2□□□□□ -0.62
GBF1-202ENST00000476019 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
GBF1-202ENST00000476019 PRAM1Q96QH2 718 aa11.2□□□□□ -0.62
GBF1-202ENST00000476019 FMN2Q9NZ56 1722 aa11.2□□□□□ -0.62
GBF1-202ENST00000476019 FAM135BQ49AJ0 1406 aa11.19□□□□□ -0.62
GBF1-202ENST00000476019 CCER1Q8TC90 406 aaPredicted RBP11.19□□□□□ -0.62
GBF1-202ENST00000476019 GPRASP1Q5JY77 1395 aa11.18□□□□□ -0.62
GBF1-202ENST00000476019 TONSLQ96HA7 1378 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms