RNA–Protein interactions for RNA: ENST00000475835.2

LSM2-211, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5

Gene LSM2, Length 211 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-211ENST00000475835 CACTIN-AS1Q8N1I8 211 aa4.82□□□□□ -1.64
LSM2-211ENST00000475835 HELBQ8NG08 1087 aaPredicted RBP4.82□□□□□ -1.64
LSM2-211ENST00000475835 CXorf38Q8TB03 319 aa4.82□□□□□ -1.64
LSM2-211ENST00000475835 ZHX1Q9UKY1 873 aaPredicted RBP4.82□□□□□ -1.64
LSM2-211ENST00000475835 BIVM-ERCC5R4GMW8 1640 aa4.82□□□□□ -1.64
LSM2-211ENST00000475835 KIF16BQ96L93 1317 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 GOLGA6CA6NDK9 693 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 GOLGA6BA6NDN3 693 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 APBB1O00213 710 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 BRD1O95696 1058 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 GOLGA6DP0CG33 693 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 TRHP20396 242 aaPredicted RBP4.81□□□□□ -1.64
LSM2-211ENST00000475835 AEBP1Q8IUX7 1158 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 NGEFQ8N5V2 710 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 SPRYD3Q8NCJ5 442 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 LSM14AQ8ND56 463 aaKnown RBP4.81□□□□□ -1.64
LSM2-211ENST00000475835 MNS1Q8NEH6 495 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 RRAGDQ9NQL2 400 aaPredicted RBP4.81□□□□□ -1.64
LSM2-211ENST00000475835 GOLGA6AQ9NYA3 693 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 MAGEC2Q9UBF1 373 aaPredicted RBP4.81□□□□□ -1.64
LSM2-211ENST00000475835 ANAPC4Q9UJX5 808 aa4.81□□□□□ -1.64
LSM2-211ENST00000475835 VIRMAQ69YN4 1812 aaKnown RBP4.81□□□□□ -1.64
LSM2-211ENST00000475835 NINLQ9Y2I6 1382 aa4.8□□□□□ -1.64
LSM2-211ENST00000475835 CCDC66A2RUB6 948 aa4.8□□□□□ -1.64
LSM2-211ENST00000475835 CCER2I3L3R5 266 aa4.8□□□□□ -1.64
LSM2-211ENST00000475835 EXOC5O00471 708 aa4.8□□□□□ -1.64
LSM2-211ENST00000475835 PAK3O75914 559 aaPredicted RBP4.8□□□□□ -1.64
LSM2-211ENST00000475835 CCDC172P0C7W6 258 aa4.8□□□□□ -1.64
LSM2-211ENST00000475835 ZSCAN20P17040 1043 aaPredicted RBP4.8□□□□□ -1.64
LSM2-211ENST00000475835 SCP2P22307 547 aa4.8□□□□□ -1.64
LSM2-211ENST00000475835 POLD1P28340 1107 aa4.8□□□□□ -1.64
LSM2-211ENST00000475835 HNRNPUL2Q1KMD3 747 aaKnown RBP4.8□□□□□ -1.64
LSM2-211ENST00000475835 LONRF3Q496Y0 759 aa4.8□□□□□ -1.64
LSM2-211ENST00000475835 ZNF513Q8N8E2 541 aaPredicted RBP4.8□□□□□ -1.64
LSM2-211ENST00000475835 CCDC94Q9BW85 323 aaPredicted RBP4.8□□□□□ -1.64
LSM2-211ENST00000475835 GZF1Q9H116 711 aaPredicted RBP4.8□□□□□ -1.64
LSM2-211ENST00000475835 BRMS1Q9HCU9 246 aa4.8□□□□□ -1.64
LSM2-211ENST00000475835 TOP2BQ02880 1626 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 ERICH3Q5RHP9 1530 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 CTAGE5O15320 804 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 MARCH6O60337 910 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 RBM26Q5T8P6 1007 aaKnown RBP4.79□□□□□ -1.64
LSM2-211ENST00000475835 ZNF280DQ6N043 979 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 APBB1IPQ7Z5R6 666 aaPredicted RBP4.79□□□□□ -1.64
LSM2-211ENST00000475835 SPATA32Q96LK8 384 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 NCAPGQ9BPX3 1015 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 SUDS3Q9H7L9 328 aaPredicted RBP4.79□□□□□ -1.64
LSM2-211ENST00000475835 JADE2Q9NQC1 790 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 ABCF2Q9UG63 623 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 SYNPO2Q9UMS6 1093 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 FRMD4BQ9Y2L6 1034 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 KNSTRNQ9Y448 316 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 PPME1Q9Y570 386 aa4.79□□□□□ -1.64
LSM2-211ENST00000475835 RAD50Q92878 1312 aa4.78□□□□□ -1.64
LSM2-211ENST00000475835 SYNRGQ9UMZ2 1314 aa4.78□□□□□ -1.64
LSM2-211ENST00000475835 ZC3H4Q9UPT8 1303 aaKnown RBP4.78□□□□□ -1.64
LSM2-211ENST00000475835 TESPA1A2RU30 521 aaPredicted RBP4.78□□□□□ -1.64
LSM2-211ENST00000475835 HSP90B2PQ58FF3 399 aa4.78□□□□□ -1.64
LSM2-211ENST00000475835 GJC2Q5T442 439 aaPredicted RBP4.78□□□□□ -1.64
LSM2-211ENST00000475835 CREBRFQ8IUR6 639 aa4.78□□□□□ -1.64
LSM2-211ENST00000475835 RNF217Q8TC41 542 aa4.78□□□□□ -1.64
LSM2-211ENST00000475835 CCDC97Q96F63 343 aaPredicted RBP4.78□□□□□ -1.64
LSM2-211ENST00000475835 BICRAQ9NZM4 1560 aa4.78□□□□□ -1.64
LSM2-211ENST00000475835 RAPGEF2Q9Y4G8 1499 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 KLHL33A6NCF5 533 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 DHX16O60231 1041 aaKnown RBP4.77□□□□□ -1.65
LSM2-211ENST00000475835 COQ9O75208 318 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 ZNF853P0CG23 659 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 SSFA2P28290 1259 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 PEX19P40855 299 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 CD151P48509 253 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 IRX5P78411 483 aaPredicted RBP4.77□□□□□ -1.65
LSM2-211ENST00000475835 HDGFL1Q5TGJ6 251 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.77□□□□□ -1.65
LSM2-211ENST00000475835 ZCRB1Q8TBF4 217 aaKnown RBP4.77□□□□□ -1.65
LSM2-211ENST00000475835 CCDC85AQ96PX6 553 aaPredicted RBP4.77□□□□□ -1.65
LSM2-211ENST00000475835 LARP6Q9BRS8 491 aaKnown RBP4.77□□□□□ -1.65
LSM2-211ENST00000475835 SMC4Q9NTJ3 1288 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 ISY1Q9ULR0 285 aaKnown RBP4.77□□□□□ -1.65
LSM2-211ENST00000475835 SMC3Q9UQE7 1217 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 AMOTL2Q9Y2J4 779 aa4.77□□□□□ -1.65
LSM2-211ENST00000475835 NCAPD3P42695 1498 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 ARID3CA6NKF2 412 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 TRIM6-TRIM34B2RNG4 842 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 TRDNQ13061 729 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 NEUROD2Q15784 382 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 CCDC181Q5TID7 509 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 ZKSCAN2Q63HK3 967 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 MORC4Q8TE76 937 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 TRIM34Q9BYJ4 488 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 DONSONQ9NYP3 566 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 SUGT1Q9Y2Z0 365 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 KIF3AQ9Y496 699 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 RPS6KL1Q9Y6S9 549 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 PHLDB1Q86UU1 1377 aa4.76□□□□□ -1.65
LSM2-211ENST00000475835 DYNC1I1O14576 645 aa4.75□□□□□ -1.65
LSM2-211ENST00000475835 IPO8O15397 1037 aaKnown RBP4.75□□□□□ -1.65
LSM2-211ENST00000475835 SMARCA5O60264 1052 aaPredicted RBP4.75□□□□□ -1.65
LSM2-211ENST00000475835 IPO7O95373 1038 aaKnown RBP4.75□□□□□ -1.65
LSM2-211ENST00000475835 FAM200BP0CF97 657 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms