RNA–Protein interactions for RNA: ENST00000475662.5

CENPA-206, Transcript of centromere protein A, humanhuman

TSL 2

Gene CENPA, Length 1,208 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CENPA-206ENST00000475662 ANKRD30AQ9BXX3 1397 aa23.75■■□□□ 1.39
CENPA-206ENST00000475662 PTPN23Q9H3S7 1636 aa23.74■■□□□ 1.39
CENPA-206ENST00000475662 PHLPP1O60346 1717 aa23.74■■□□□ 1.39
CENPA-206ENST00000475662 PLEKHG1Q9ULL1 1385 aa23.71■■□□□ 1.39
CENPA-206ENST00000475662 LOC105371045A0A1W2PR82 267 aa23.71■■□□□ 1.39
CENPA-206ENST00000475662 ZFYVE9O95405 1425 aa23.7■■□□□ 1.38
CENPA-206ENST00000475662 LRP6O75581 1613 aa23.7■■□□□ 1.38
CENPA-206ENST00000475662 COL16A1Q07092 1604 aaPredicted RBP23.7■■□□□ 1.38
CENPA-206ENST00000475662 SPATA31A6Q5VVP1 1343 aa23.69■■□□□ 1.38
CENPA-206ENST00000475662 FGD6Q6ZV73 1430 aa23.68■■□□□ 1.38
CENPA-206ENST00000475662 UPF1Q92900 1129 aaKnown RBP eCLIP23.68■■□□□ 1.381e-7■■■■■ 29.1
CENPA-206ENST00000475662 PPP1R15AO75807 674 aaPredicted RBP23.67■■□□□ 1.38
CENPA-206ENST00000475662 MEX3CQ5U5Q3 659 aaKnown RBP23.67■■□□□ 1.38
CENPA-206ENST00000475662 RIMS2Q9UQ26 1411 aa23.67■■□□□ 1.38
CENPA-206ENST00000475662 ZNF772Q68DY9 489 aaPredicted RBP23.66■■□□□ 1.38
CENPA-206ENST00000475662 NCOA3Q9Y6Q9 1424 aa23.66■■□□□ 1.38
CENPA-206ENST00000475662 TRIM52Q96A61 297 aa23.65■■□□□ 1.38
CENPA-206ENST00000475662 TBX22Q9Y458 520 aa23.65■■□□□ 1.38
CENPA-206ENST00000475662 RPRD2Q5VT52 1461 aaKnown RBP23.64■■□□□ 1.38
CENPA-206ENST00000475662 HDGFP51858 240 aaKnown RBP23.64■■□□□ 1.37
CENPA-206ENST00000475662 C14orf37Q86TY3 774 aa23.64■■□□□ 1.37
CENPA-206ENST00000475662 CHD2O14647 1828 aaKnown RBP23.61■■□□□ 1.37
CENPA-206ENST00000475662 CADPS2Q86UW7 1296 aa23.61■■□□□ 1.37
CENPA-206ENST00000475662 APLP2Q06481 763 aa23.6■■□□□ 1.37
CENPA-206ENST00000475662 C19orf44Q9H6X5 657 aa23.6■■□□□ 1.37
CENPA-206ENST00000475662 ADGRL2O95490 1459 aa23.6■■□□□ 1.37
CENPA-206ENST00000475662 AHDC1Q5TGY3 1603 aaPredicted RBP23.59■■□□□ 1.37
CENPA-206ENST00000475662 ADAMTS13Q76LX8 1427 aa23.59■■□□□ 1.37
CENPA-206ENST00000475662 ATF3P18847 181 aa23.58■■□□□ 1.37
CENPA-206ENST00000475662 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.58■■□□□ 1.37
CENPA-206ENST00000475662 RXRBP28702 533 aa23.57■■□□□ 1.36
CENPA-206ENST00000475662 TMEM131LA2VDJ0 1609 aa23.57■■□□□ 1.36
CENPA-206ENST00000475662 ANKRD50Q9ULJ7 1429 aa23.57■■□□□ 1.36
CENPA-206ENST00000475662 NUTM2DQ5VT03 806 aaPredicted RBP23.56■■□□□ 1.36
CENPA-206ENST00000475662 CHGAP10645 457 aaKnown RBP23.55■■□□□ 1.36
CENPA-206ENST00000475662 GCC2Q8IWJ2 1684 aa23.54■■□□□ 1.36
CENPA-206ENST00000475662 PIK3R4Q99570 1358 aa23.54■■□□□ 1.36
CENPA-206ENST00000475662 BRINP3Q76B58 766 aa23.54■■□□□ 1.36
CENPA-206ENST00000475662 SHPRHQ149N8 1683 aa23.53■■□□□ 1.36
CENPA-206ENST00000475662 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.53■■□□□ 1.36
CENPA-206ENST00000475662 MYO5BQ9ULV0 1848 aa23.52■■□□□ 1.36
CENPA-206ENST00000475662 NUTM2BA6NNL0 878 aaPredicted RBP23.52■■□□□ 1.36
CENPA-206ENST00000475662 NUTM2EB1AL46 878 aaPredicted RBP23.52■■□□□ 1.36
CENPA-206ENST00000475662 NUTM2AQ8IVF1 878 aaPredicted RBP23.52■■□□□ 1.36
CENPA-206ENST00000475662 DIP2AQ14689 1571 aa23.5■■□□□ 1.35
CENPA-206ENST00000475662 CDK12Q9NYV4 1490 aaPredicted RBP23.49■■□□□ 1.35
CENPA-206ENST00000475662 AMOTL2Q9Y2J4 779 aa23.49■■□□□ 1.35
CENPA-206ENST00000475662 FAM50AQ14320 339 aaKnown RBP23.48■■□□□ 1.35
CENPA-206ENST00000475662 AFF2P51816 1311 aa23.48■■□□□ 1.35
CENPA-206ENST00000475662 PTPRUQ92729 1446 aa23.48■■□□□ 1.35
CENPA-206ENST00000475662 TRPM2O94759 1503 aa23.44■■□□□ 1.34
CENPA-206ENST00000475662 DCCP43146 1447 aa23.44■■□□□ 1.34
CENPA-206ENST00000475662 SETD5Q9C0A6 1442 aa23.44■■□□□ 1.34
CENPA-206ENST00000475662 ASXL1Q8IXJ9 1541 aa23.43■■□□□ 1.34
CENPA-206ENST00000475662 UNC13BO14795 1591 aa23.4■■□□□ 1.34
CENPA-206ENST00000475662 RGS12O14924 1447 aa23.4■■□□□ 1.34
CENPA-206ENST00000475662 MST1RQ04912 1400 aa23.4■■□□□ 1.34
CENPA-206ENST00000475662 LRRC59Q96AG4 307 aaKnown RBP23.39■■□□□ 1.33
CENPA-206ENST00000475662 E9PCH4 1651 aa23.38■■□□□ 1.33
CENPA-206ENST00000475662 C8orf37Q96NL8 207 aa23.38■■□□□ 1.33
CENPA-206ENST00000475662 QTRT2Q9H974 415 aaKnown RBP23.38■■□□□ 1.33
CENPA-206ENST00000475662 RBM6P78332 1123 aaKnown RBP23.37■■□□□ 1.33
CENPA-206ENST00000475662 DDX17Q92841 729 aaKnown RBP23.36■■□□□ 1.33
CENPA-206ENST00000475662 PNPLA6Q8IY17 1366 aa23.35■■□□□ 1.33
CENPA-206ENST00000475662 XRN1Q8IZH2 1706 aaKnown RBP23.33■■□□□ 1.33
CENPA-206ENST00000475662 NHSL1Q5SYE7 1610 aa23.33■■□□□ 1.32
CENPA-206ENST00000475662 METP08581 1390 aa23.32■■□□□ 1.32
CENPA-206ENST00000475662 NUP155O75694 1391 aa23.31■■□□□ 1.32
CENPA-206ENST00000475662 IQGAP3Q86VI3 1631 aa23.31■■□□□ 1.32
CENPA-206ENST00000475662 NRXN3Q9Y4C0 1643 aa23.31■■□□□ 1.32
CENPA-206ENST00000475662 SETBP1Q9Y6X0 1596 aa23.31■■□□□ 1.32
CENPA-206ENST00000475662 ADGRL3Q9HAR2 1447 aa23.3■■□□□ 1.32
CENPA-206ENST00000475662 SRCAPQ6ZRS2 3230 aa23.29■■□□□ 1.32
CENPA-206ENST00000475662 ROCK1Q13464 1354 aa23.28■■□□□ 1.32
CENPA-206ENST00000475662 ADAMTS2O95450 1211 aa23.28■■□□□ 1.32
CENPA-206ENST00000475662 NGLY1Q96IV0 654 aa23.28■■□□□ 1.32
CENPA-206ENST00000475662 ZNF326Q5BKZ1 582 aaKnown RBP23.26■■□□□ 1.31
CENPA-206ENST00000475662 ATAD2Q6PL18 1390 aa23.24■■□□□ 1.31
CENPA-206ENST00000475662 C1orf167Q5SNV9 1468 aa23.23■■□□□ 1.31
CENPA-206ENST00000475662 USP21Q9UK80 565 aa23.2■■□□□ 1.3
CENPA-206ENST00000475662 SOS2Q07890 1332 aaPredicted RBP23.19■■□□□ 1.3
CENPA-206ENST00000475662 TRPC5Q9UL62 973 aaPredicted RBP23.19■■□□□ 1.3
CENPA-206ENST00000475662 ORAI2Q96SN7 254 aa23.18■■□□□ 1.3
CENPA-206ENST00000475662 NALCNQ8IZF0 1738 aa23.18■■□□□ 1.3
CENPA-206ENST00000475662 FNBP4Q8N3X1 1017 aaPredicted RBP23.16■■□□□ 1.3
CENPA-206ENST00000475662 PTCH1Q13635 1447 aa23.15■■□□□ 1.3
CENPA-206ENST00000475662 NEXMIFQ5QGS0 1516 aa23.14■■□□□ 1.3
CENPA-206ENST00000475662 ITGAEP38570 1179 aa23.14■■□□□ 1.29
CENPA-206ENST00000475662 ZRANB1Q9UGI0 708 aa23.14■■□□□ 1.29
CENPA-206ENST00000475662 LAMC1P11047 1609 aa23.14■■□□□ 1.29
CENPA-206ENST00000475662 ATRNO75882 1429 aa23.14■■□□□ 1.29
CENPA-206ENST00000475662 SPHKAPQ2M3C7 1700 aa23.13■■□□□ 1.29
CENPA-206ENST00000475662 ROBO2Q9HCK4 1378 aa23.13■■□□□ 1.29
CENPA-206ENST00000475662 FOXD1Q16676 465 aa23.12■■□□□ 1.29
CENPA-206ENST00000475662 CLTCL1P53675 1640 aa23.08■■□□□ 1.28
CENPA-206ENST00000475662 MYOM2P54296 1465 aa23.06■■□□□ 1.28
CENPA-206ENST00000475662 CCDC125Q86Z20 511 aa23.06■■□□□ 1.28
CENPA-206ENST00000475662 PRAG1Q86YV5 1406 aa23.05■■□□□ 1.28
CENPA-206ENST00000475662 BCL9LQ86UU0 1499 aa23.05■■□□□ 1.28
CENPA-206ENST00000475662 COL22A1Q8NFW1 1626 aaPredicted RBP23.04■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 129.6 ms