RNA–Protein interactions for RNA: ENST00000475635.1

CCDC57-208, Transcript of coiled-coil domain containing 57, humanhuman

TSL 4

Gene CCDC57, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-208ENST00000475635 ROBO1Q9Y6N7 1651 aa19.24■□□□□ 0.67
CCDC57-208ENST00000475635 UNC13BO14795 1591 aa19.24■□□□□ 0.67
CCDC57-208ENST00000475635 TMEM131LA2VDJ0 1609 aa19.23■□□□□ 0.67
CCDC57-208ENST00000475635 FAM135BQ49AJ0 1406 aa19.23■□□□□ 0.67
CCDC57-208ENST00000475635 E9PCH4 1651 aa19.22■□□□□ 0.67
CCDC57-208ENST00000475635 PROSER2Q86WR7 435 aaPredicted RBP19.22■□□□□ 0.67
CCDC57-208ENST00000475635 NKTRP30414 1462 aaKnown RBP19.22■□□□□ 0.67
CCDC57-208ENST00000475635 RBM33Q96EV2 1170 aaKnown RBP19.21■□□□□ 0.67
CCDC57-208ENST00000475635 BCANQ96GW7 911 aa19.21■□□□□ 0.67
CCDC57-208ENST00000475635 ZFYVE9O95405 1425 aa19.2■□□□□ 0.66
CCDC57-208ENST00000475635 RIMS2Q9UQ26 1411 aa19.17■□□□□ 0.66
CCDC57-208ENST00000475635 IQGAP3Q86VI3 1631 aa19.17■□□□□ 0.66
CCDC57-208ENST00000475635 PLEKHG1Q9ULL1 1385 aa19.17■□□□□ 0.66
CCDC57-208ENST00000475635 PPP1R15AO75807 674 aaPredicted RBP19.16■□□□□ 0.66
CCDC57-208ENST00000475635 PHLPP1O60346 1717 aa19.15■□□□□ 0.66
CCDC57-208ENST00000475635 MSH6P52701 1360 aa19.15■□□□□ 0.66
CCDC57-208ENST00000475635 HDGFP51858 240 aaKnown RBP19.14■□□□□ 0.65
CCDC57-208ENST00000475635 RGS17Q9UGC6 210 aaPredicted RBP19.14■□□□□ 0.65
CCDC57-208ENST00000475635 ROCK1Q13464 1354 aa19.14■□□□□ 0.65
CCDC57-208ENST00000475635 CHGAP10645 457 aaKnown RBP19.12■□□□□ 0.65
CCDC57-208ENST00000475635 DIP2AQ14689 1571 aa19.1■□□□□ 0.65
CCDC57-208ENST00000475635 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.09■□□□□ 0.65
CCDC57-208ENST00000475635 SLAIN2Q9P270 581 aa19.09■□□□□ 0.65
CCDC57-208ENST00000475635 TBX22Q9Y458 520 aa19.09■□□□□ 0.65
CCDC57-208ENST00000475635 NUTM2DQ5VT03 806 aaPredicted RBP19.08■□□□□ 0.64
CCDC57-208ENST00000475635 SPHKAPQ2M3C7 1700 aa19.08■□□□□ 0.64
CCDC57-208ENST00000475635 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.08■□□□□ 0.64
CCDC57-208ENST00000475635 ADAMTS13Q76LX8 1427 aa19.08■□□□□ 0.64
CCDC57-208ENST00000475635 NUP155O75694 1391 aa19.06■□□□□ 0.64
CCDC57-208ENST00000475635 COL16A1Q07092 1604 aaPredicted RBP19.05■□□□□ 0.64
CCDC57-208ENST00000475635 ITGAEP38570 1179 aa19.05■□□□□ 0.64
CCDC57-208ENST00000475635 NCOA3Q9Y6Q9 1424 aa19.05■□□□□ 0.64
CCDC57-208ENST00000475635 TRPM2O94759 1503 aa19.04■□□□□ 0.64
CCDC57-208ENST00000475635 C14orf37Q86TY3 774 aa19.03■□□□□ 0.64
CCDC57-208ENST00000475635 PIK3R4Q99570 1358 aa19.03■□□□□ 0.64
CCDC57-208ENST00000475635 POTEAQ6S8J7 498 aa19.02■□□□□ 0.64
CCDC57-208ENST00000475635 NRXN3Q9Y4C0 1643 aa19.01■□□□□ 0.63
CCDC57-208ENST00000475635 JCADQ9P266 1359 aa19.01■□□□□ 0.63
CCDC57-208ENST00000475635 PPARGC1BQ86YN6 1023 aaKnown RBP19■□□□□ 0.63
CCDC57-208ENST00000475635 SETD1AO15047 1707 aaKnown RBP18.99■□□□□ 0.63
CCDC57-208ENST00000475635 XRN1Q8IZH2 1706 aaKnown RBP18.98■□□□□ 0.63
CCDC57-208ENST00000475635 CADPS2Q86UW7 1296 aa18.98■□□□□ 0.63
CCDC57-208ENST00000475635 C19orf44Q9H6X5 657 aa18.98■□□□□ 0.63
CCDC57-208ENST00000475635 SHPRHQ149N8 1683 aa18.98■□□□□ 0.63
CCDC57-208ENST00000475635 KIF1BO60333 1816 aa18.97■□□□□ 0.63
CCDC57-208ENST00000475635 AHDC1Q5TGY3 1603 aaPredicted RBP18.97■□□□□ 0.63
CCDC57-208ENST00000475635 ATF3P18847 181 aa18.97■□□□□ 0.63
CCDC57-208ENST00000475635 PTPRUQ92729 1446 aa18.97■□□□□ 0.63
CCDC57-208ENST00000475635 SETBP1Q9Y6X0 1596 aa18.97■□□□□ 0.63
CCDC57-208ENST00000475635 AMOTL2Q9Y2J4 779 aa18.96■□□□□ 0.63
CCDC57-208ENST00000475635 CLTCL1P53675 1640 aa18.94■□□□□ 0.62
CCDC57-208ENST00000475635 LRP6O75581 1613 aa18.93■□□□□ 0.62
CCDC57-208ENST00000475635 ZNF326Q5BKZ1 582 aaKnown RBP18.92■□□□□ 0.62
CCDC57-208ENST00000475635 SPATA31A6Q5VVP1 1343 aa18.92■□□□□ 0.62
CCDC57-208ENST00000475635 DCCP43146 1447 aa18.91■□□□□ 0.62
CCDC57-208ENST00000475635 NEXMIFQ5QGS0 1516 aa18.9■□□□□ 0.62
CCDC57-208ENST00000475635 NHSL1Q5SYE7 1610 aa18.89■□□□□ 0.62
CCDC57-208ENST00000475635 METP08581 1390 aa18.89■□□□□ 0.61
CCDC57-208ENST00000475635 NALCNQ8IZF0 1738 aa18.88■□□□□ 0.61
CCDC57-208ENST00000475635 MEX3CQ5U5Q3 659 aaKnown RBP18.88■□□□□ 0.61
CCDC57-208ENST00000475635 BRINP3Q76B58 766 aa18.88■□□□□ 0.61
CCDC57-208ENST00000475635 ASXL1Q8IXJ9 1541 aa18.88■□□□□ 0.61
CCDC57-208ENST00000475635 RRBP1Q9P2E9 1410 aaKnown RBP18.87■□□□□ 0.61
CCDC57-208ENST00000475635 MST1RQ04912 1400 aa18.85■□□□□ 0.61
CCDC57-208ENST00000475635 NAIPQ13075 1403 aa18.85■□□□□ 0.61
CCDC57-208ENST00000475635 ZNF772Q68DY9 489 aaPredicted RBP18.83■□□□□ 0.6
CCDC57-208ENST00000475635 ADGRL3Q9HAR2 1447 aa18.83■□□□□ 0.6
CCDC57-208ENST00000475635 PPLO60437 1756 aa18.81■□□□□ 0.6
CCDC57-208ENST00000475635 SETD5Q9C0A6 1442 aa18.81■□□□□ 0.6
CCDC57-208ENST00000475635 NUTM2BA6NNL0 878 aaPredicted RBP18.8■□□□□ 0.6
CCDC57-208ENST00000475635 NUTM2EB1AL46 878 aaPredicted RBP18.8■□□□□ 0.6
CCDC57-208ENST00000475635 NUTM2AQ8IVF1 878 aaPredicted RBP18.8■□□□□ 0.6
CCDC57-208ENST00000475635 TRIM52Q96A61 297 aa18.77■□□□□ 0.6
CCDC57-208ENST00000475635 HFM1A2PYH4 1435 aa18.76■□□□□ 0.59
CCDC57-208ENST00000475635 DDX17Q92841 729 aaKnown RBP18.76■□□□□ 0.59
CCDC57-208ENST00000475635 LRRC59Q96AG4 307 aaKnown RBP18.76■□□□□ 0.59
CCDC57-208ENST00000475635 PTCH1Q13635 1447 aa18.75■□□□□ 0.59
CCDC57-208ENST00000475635 LAMC1P11047 1609 aa18.75■□□□□ 0.59
CCDC57-208ENST00000475635 VGFO15240 615 aaPredicted RBP18.75■□□□□ 0.59
CCDC57-208ENST00000475635 C1orf167Q5SNV9 1468 aa18.74■□□□□ 0.59
CCDC57-208ENST00000475635 RXRBP28702 533 aa18.74■□□□□ 0.59
CCDC57-208ENST00000475635 ROBO2Q9HCK4 1378 aa18.73■□□□□ 0.59
CCDC57-208ENST00000475635 AFF2P51816 1311 aa18.73■□□□□ 0.59
CCDC57-208ENST00000475635 PNPLA6Q8IY17 1366 aa18.72■□□□□ 0.59
CCDC57-208ENST00000475635 SLC4A1APQ9BWU0 796 aaKnown RBP18.72■□□□□ 0.59
CCDC57-208ENST00000475635 RPGRIP1LQ68CZ1 1315 aa18.72■□□□□ 0.59
CCDC57-208ENST00000475635 CDK12Q9NYV4 1490 aaPredicted RBP18.71■□□□□ 0.59
CCDC57-208ENST00000475635 PRAG1Q86YV5 1406 aa18.71■□□□□ 0.59
CCDC57-208ENST00000475635 UPF1Q92900 1129 aaKnown RBP eCLIP18.7■□□□□ 0.58
CCDC57-208ENST00000475635 C8orf37Q96NL8 207 aa18.69■□□□□ 0.58
CCDC57-208ENST00000475635 IFT172Q9UG01 1749 aa18.69■□□□□ 0.58
CCDC57-208ENST00000475635 ORAI2Q96SN7 254 aa18.67■□□□□ 0.58
CCDC57-208ENST00000475635 FOXD1Q16676 465 aa18.65■□□□□ 0.58
CCDC57-208ENST00000475635 SOS2Q07890 1332 aaPredicted RBP18.65■□□□□ 0.58
CCDC57-208ENST00000475635 CDC42BPGQ6DT37 1551 aa18.64■□□□□ 0.58
CCDC57-208ENST00000475635 COL22A1Q8NFW1 1626 aaPredicted RBP18.64■□□□□ 0.57
CCDC57-208ENST00000475635 ADAMTS2O95450 1211 aa18.64■□□□□ 0.57
CCDC57-208ENST00000475635 QTRT2Q9H974 415 aaKnown RBP18.64■□□□□ 0.57
CCDC57-208ENST00000475635 RGS12O14924 1447 aa18.64■□□□□ 0.57
CCDC57-208ENST00000475635 MARF1Q9Y4F3 1742 aaKnown RBP18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms