RNA–Protein interactions for RNA: ENST00000475506.1

SDHB-205, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 550 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-205ENST00000475506 SP7Q8TDD2 431 aaPredicted RBP10.06□□□□□ -0.8
SDHB-205ENST00000475506 BCL2L12Q9HB09 334 aa10.06□□□□□ -0.8
SDHB-205ENST00000475506 ZSWIM6Q9HCJ5 1215 aa10.06□□□□□ -0.8
SDHB-205ENST00000475506 PLSCR2Q9NRY7 297 aa10.06□□□□□ -0.8
SDHB-205ENST00000475506 DDX11L8A8MPP1 907 aa10.05□□□□□ -0.8
SDHB-205ENST00000475506 POTEB2H3BUK9 544 aa10.05□□□□□ -0.8
SDHB-205ENST00000475506 NDUFV2P19404 249 aa10.05□□□□□ -0.8
SDHB-205ENST00000475506 QPCTQ16769 361 aa10.05□□□□□ -0.8
SDHB-205ENST00000475506 PDIA4P13667 645 aaKnown RBP10.04□□□□□ -0.8
SDHB-205ENST00000475506 NECTIN2Q92692 538 aa10.04□□□□□ -0.8
SDHB-205ENST00000475506 GDPD2Q9HCC8 539 aa10.04□□□□□ -0.8
SDHB-205ENST00000475506 PCDHB15Q9Y5E8 787 aa10.04□□□□□ -0.8
SDHB-205ENST00000475506 PPP1R3GB7ZBB8 358 aa10.03□□□□□ -0.8
SDHB-205ENST00000475506 CSPP1Q1MSJ5 1256 aa10.03□□□□□ -0.8
SDHB-205ENST00000475506 PPP4R3BQ5MIZ7 849 aa10.03□□□□□ -0.8
SDHB-205ENST00000475506 TMEM134Q9H6X4 195 aa10.03□□□□□ -0.8
SDHB-205ENST00000475506 SERPINA10Q9UK55 444 aa10.03□□□□□ -0.8
SDHB-205ENST00000475506 LILRB3O75022 631 aa10.02□□□□□ -0.81
SDHB-205ENST00000475506 DNAJB2P25686 324 aa10.02□□□□□ -0.81
SDHB-205ENST00000475506 RTL5Q5HYW3 569 aaPredicted RBP10.02□□□□□ -0.81
SDHB-205ENST00000475506 NUTM1Q86Y26 1132 aa10.02□□□□□ -0.81
SDHB-205ENST00000475506 TATDN2Q93075 761 aa10.02□□□□□ -0.81
SDHB-205ENST00000475506 CCDC97Q96F63 343 aaPredicted RBP10.02□□□□□ -0.81
SDHB-205ENST00000475506 ZNF330Q9Y3S2 320 aaPredicted RBP10.02□□□□□ -0.81
SDHB-205ENST00000475506 TRIM6-TRIM34B2RNG4 842 aa10.01□□□□□ -0.81
SDHB-205ENST00000475506 RIMBP2O15034 1052 aa10.01□□□□□ -0.81
SDHB-205ENST00000475506 SULF1Q8IWU6 871 aa10.01□□□□□ -0.81
SDHB-205ENST00000475506 PNMA3Q9UL41 463 aa10.01□□□□□ -0.81
SDHB-205ENST00000475506 SMAPO00193 183 aa10□□□□□ -0.81
SDHB-205ENST00000475506 NBPF26B4DH59 902 aa9.99□□□□□ -0.81
SDHB-205ENST00000475506 PTPREP23469 700 aa9.99□□□□□ -0.81
SDHB-205ENST00000475506 CABLES1Q8TDN4 633 aa9.99□□□□□ -0.81
SDHB-205ENST00000475506 GJA5P36382 358 aa9.98□□□□□ -0.81
SDHB-205ENST00000475506 PROX2Q3B8N5 592 aa9.98□□□□□ -0.81
SDHB-205ENST00000475506 ZNF710Q8N1W2 664 aa9.98□□□□□ -0.81
SDHB-205ENST00000475506 TBC1D2BQ9UPU7 963 aa9.98□□□□□ -0.81
SDHB-205ENST00000475506 AP1G2O75843 785 aa9.97□□□□□ -0.81
SDHB-205ENST00000475506 PSDA5PKW4 1024 aaPredicted RBP9.96□□□□□ -0.82
SDHB-205ENST00000475506 POM121CA8CG34 1229 aa9.96□□□□□ -0.82
SDHB-205ENST00000475506 SOCS7O14512 581 aa9.96□□□□□ -0.82
SDHB-205ENST00000475506 ABL2P42684 1182 aa9.95□□□□□ -0.82
SDHB-205ENST00000475506 PACS2Q86VP3 889 aa9.95□□□□□ -0.82
SDHB-205ENST00000475506 KDM4AO75164 1064 aa9.94□□□□□ -0.82
SDHB-205ENST00000475506 USP17L8P0C7I0 530 aa9.94□□□□□ -0.82
SDHB-205ENST00000475506 RDH13Q8NBN7 331 aa9.94□□□□□ -0.82
SDHB-205ENST00000475506 GJD4Q96KN9 370 aaPredicted RBP9.93□□□□□ -0.82
SDHB-205ENST00000475506 TRAIPQ9BWF2 469 aa9.93□□□□□ -0.82
SDHB-205ENST00000475506 PCDHGC3Q9UN70 934 aa9.93□□□□□ -0.82
SDHB-205ENST00000475506 NUTM2BA6NNL0 878 aaPredicted RBP9.92□□□□□ -0.82
SDHB-205ENST00000475506 NUTM2EB1AL46 878 aaPredicted RBP9.92□□□□□ -0.82
SDHB-205ENST00000475506 HOXA2O43364 376 aa9.92□□□□□ -0.82
SDHB-205ENST00000475506 SLC10A3P09131 477 aa9.92□□□□□ -0.82
SDHB-205ENST00000475506 GCGRP47871 477 aa9.92□□□□□ -0.82
SDHB-205ENST00000475506 NUTM2DQ5VT03 806 aaPredicted RBP9.92□□□□□ -0.82
SDHB-205ENST00000475506 PRPF38BQ5VTL8 546 aaKnown RBP9.92□□□□□ -0.82
SDHB-205ENST00000475506 NUTM2AQ8IVF1 878 aaPredicted RBP9.92□□□□□ -0.82
SDHB-205ENST00000475506 HLA-CQ95604 372 aa9.92□□□□□ -0.82
SDHB-205ENST00000475506 GPR37L1O60883 481 aa9.91□□□□□ -0.82
SDHB-205ENST00000475506 HOXB1P14653 301 aaPredicted RBP9.91□□□□□ -0.82
SDHB-205ENST00000475506 GUCA2AQ02747 115 aa9.91□□□□□ -0.82
SDHB-205ENST00000475506 KCNK17Q96T54 332 aa9.91□□□□□ -0.82
SDHB-205ENST00000475506 ZBTB7CA1YPR0 619 aa9.9□□□□□ -0.82
SDHB-205ENST00000475506 IRF5Q13568 498 aa9.9□□□□□ -0.82
SDHB-205ENST00000475506 RETREG2Q8NC44 543 aa9.9□□□□□ -0.82
SDHB-205ENST00000475506 GLMNQ92990 594 aa9.9□□□□□ -0.82
SDHB-205ENST00000475506 KIAA1468Q9P260 1216 aa9.9□□□□□ -0.82
SDHB-205ENST00000475506 FDX1P10109 184 aa9.89□□□□□ -0.83
SDHB-205ENST00000475506 CALR3Q96L12 384 aaKnown RBP9.89□□□□□ -0.83
SDHB-205ENST00000475506 HMX1Q9NP08 348 aaPredicted RBP9.89□□□□□ -0.83
SDHB-205ENST00000475506 USP46P62068 366 aa9.88□□□□□ -0.83
SDHB-205ENST00000475506 CTDSPL2Q05D32 466 aa9.88□□□□□ -0.83
SDHB-205ENST00000475506 ADAMTS19Q8TE59 1207 aa9.88□□□□□ -0.83
SDHB-205ENST00000475506 ZBED2Q9BTP6 218 aa9.88□□□□□ -0.83
SDHB-205ENST00000475506 ZBTB3Q9H5J0 574 aa9.88□□□□□ -0.83
SDHB-205ENST00000475506 SCUBE2Q9NQ36 999 aa9.88□□□□□ -0.83
SDHB-205ENST00000475506 SWT1Q5T5J6 900 aaKnown RBP9.87□□□□□ -0.83
SDHB-205ENST00000475506 TRIM34Q9BYJ4 488 aa9.87□□□□□ -0.83
SDHB-205ENST00000475506 PSEN2P49810 448 aa9.85□□□□□ -0.83
SDHB-205ENST00000475506 WWC1Q8IX03 1113 aa9.85□□□□□ -0.83
SDHB-205ENST00000475506 PRM3Q9NNZ6 103 aa9.85□□□□□ -0.83
SDHB-205ENST00000475506 NDUFB9Q9Y6M9 179 aa9.84□□□□□ -0.83
SDHB-205ENST00000475506 POTEEQ6S8J3 1075 aa9.83□□□□□ -0.84
SDHB-205ENST00000475506 MAMSTRQ6ZN01 415 aa9.83□□□□□ -0.84
SDHB-205ENST00000475506 LRRN4Q8WUT4 740 aa9.83□□□□□ -0.84
SDHB-205ENST00000475506 SEPT9Q9UHD8 586 aaPredicted RBP9.83□□□□□ -0.84
SDHB-205ENST00000475506 CFAP99D6REC4 459 aa9.82□□□□□ -0.84
SDHB-205ENST00000475506 HDGFL1Q5TGJ6 251 aa9.82□□□□□ -0.84
SDHB-205ENST00000475506 EPS8L1Q8TE68 723 aa9.82□□□□□ -0.84
SDHB-205ENST00000475506 PPP1R15AO75807 674 aaPredicted RBP9.81□□□□□ -0.84
SDHB-205ENST00000475506 MTMR2Q13614 643 aa9.8□□□□□ -0.84
SDHB-205ENST00000475506 RSPH4AQ5TD94 716 aa9.8□□□□□ -0.84
SDHB-205ENST00000475506 AEBP1Q8IUX7 1158 aa9.8□□□□□ -0.84
SDHB-205ENST00000475506 RABGEF1Q9UJ41 708 aa9.8□□□□□ -0.84
SDHB-205ENST00000475506 SNPHO15079 494 aa9.79□□□□□ -0.84
SDHB-205ENST00000475506 FUT2Q10981 343 aa9.79□□□□□ -0.84
SDHB-205ENST00000475506 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
SDHB-205ENST00000475506 NPM2Q86SE8 214 aaKnown RBP9.79□□□□□ -0.84
SDHB-205ENST00000475506 KCTD17Q8N5Z5 321 aa9.79□□□□□ -0.84
SDHB-205ENST00000475506 CCDC9Q9Y3X0 531 aaKnown RBP9.79□□□□□ -0.84
SDHB-205ENST00000475506 SRPK2P78362 688 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms