RNA–Protein interactions for RNA: ENST00000475501.1

LRP8-208, Transcript of LDL receptor related protein 8, humanhuman

TSL 3

Gene LRP8, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP8-208ENST00000475501 E9PCH4 1651 aa13.78□□□□□ -0.2
LRP8-208ENST00000475501 CHD2O14647 1828 aaKnown RBP13.78□□□□□ -0.2
LRP8-208ENST00000475501 ZFYVE9O95405 1425 aa13.77□□□□□ -0.21
LRP8-208ENST00000475501 MED1Q15648 1581 aaPredicted RBP13.77□□□□□ -0.21
LRP8-208ENST00000475501 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.77□□□□□ -0.21
LRP8-208ENST00000475501 PLEKHG1Q9ULL1 1385 aa13.77□□□□□ -0.21
LRP8-208ENST00000475501 FAM135BQ49AJ0 1406 aa13.76□□□□□ -0.21
LRP8-208ENST00000475501 NCOA3Q9Y6Q9 1424 aa13.75□□□□□ -0.21
LRP8-208ENST00000475501 DIP2AQ14689 1571 aa13.75□□□□□ -0.21
LRP8-208ENST00000475501 PIK3R4Q99570 1358 aa13.73□□□□□ -0.21
LRP8-208ENST00000475501 TBX22Q9Y458 520 aa13.73□□□□□ -0.21
LRP8-208ENST00000475501 RIMS2Q9UQ26 1411 aa13.73□□□□□ -0.21
LRP8-208ENST00000475501 TMEM94Q12767 1356 aa13.72□□□□□ -0.21
LRP8-208ENST00000475501 NUP155O75694 1391 aa13.71□□□□□ -0.21
LRP8-208ENST00000475501 SLC26A8Q96RN1 970 aa13.71□□□□□ -0.21
LRP8-208ENST00000475501 SPHKAPQ2M3C7 1700 aa13.7□□□□□ -0.22
LRP8-208ENST00000475501 PROSER2Q86WR7 435 aaPredicted RBP13.7□□□□□ -0.22
LRP8-208ENST00000475501 RRBP1Q9P2E9 1410 aaKnown RBP13.7□□□□□ -0.22
LRP8-208ENST00000475501 PPP1R15AO75807 674 aaPredicted RBP13.69□□□□□ -0.22
LRP8-208ENST00000475501 MSH6P52701 1360 aa13.69□□□□□ -0.22
LRP8-208ENST00000475501 ROBO1Q9Y6N7 1651 aa13.67□□□□□ -0.22
LRP8-208ENST00000475501 BCANQ96GW7 911 aa13.67□□□□□ -0.22
LRP8-208ENST00000475501 ADAMTS13Q76LX8 1427 aa13.65□□□□□ -0.22
LRP8-208ENST00000475501 TRPM2O94759 1503 aa13.65□□□□□ -0.22
LRP8-208ENST00000475501 PHF23Q9BUL5 403 aaPredicted RBP13.65□□□□□ -0.22
LRP8-208ENST00000475501 KIF1BO60333 1816 aa13.64□□□□□ -0.23
LRP8-208ENST00000475501 SETBP1Q9Y6X0 1596 aa13.63□□□□□ -0.23
LRP8-208ENST00000475501 CHGAP10645 457 aaKnown RBP13.63□□□□□ -0.23
LRP8-208ENST00000475501 SLAIN2Q9P270 581 aa13.63□□□□□ -0.23
LRP8-208ENST00000475501 ITGAEP38570 1179 aa13.61□□□□□ -0.23
LRP8-208ENST00000475501 CADPS2Q86UW7 1296 aa13.61□□□□□ -0.23
LRP8-208ENST00000475501 C19orf44Q9H6X5 657 aa13.61□□□□□ -0.23
LRP8-208ENST00000475501 DCCP43146 1447 aa13.61□□□□□ -0.23
LRP8-208ENST00000475501 NAIPQ13075 1403 aa13.61□□□□□ -0.23
LRP8-208ENST00000475501 PHLPP1O60346 1717 aa13.61□□□□□ -0.23
LRP8-208ENST00000475501 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.61□□□□□ -0.23
LRP8-208ENST00000475501 HFM1A2PYH4 1435 aa13.6□□□□□ -0.23
LRP8-208ENST00000475501 NRXN3Q9Y4C0 1643 aa13.6□□□□□ -0.23
LRP8-208ENST00000475501 XRN1Q8IZH2 1706 aaKnown RBP13.59□□□□□ -0.23
LRP8-208ENST00000475501 ACIN1Q9UKV3 1341 aaKnown RBP13.59□□□□□ -0.23
LRP8-208ENST00000475501 JCADQ9P266 1359 aa13.58□□□□□ -0.24
LRP8-208ENST00000475501 CLTCL1P53675 1640 aa13.57□□□□□ -0.24
LRP8-208ENST00000475501 AMOTL2Q9Y2J4 779 aa13.57□□□□□ -0.24
LRP8-208ENST00000475501 NEXMIFQ5QGS0 1516 aa13.57□□□□□ -0.24
LRP8-208ENST00000475501 AHDC1Q5TGY3 1603 aaPredicted RBP13.57□□□□□ -0.24
LRP8-208ENST00000475501 ATF3P18847 181 aa13.56□□□□□ -0.24
LRP8-208ENST00000475501 COL16A1Q07092 1604 aaPredicted RBP13.56□□□□□ -0.24
LRP8-208ENST00000475501 RPGRIP1LQ68CZ1 1315 aa13.55□□□□□ -0.24
LRP8-208ENST00000475501 PTPRUQ92729 1446 aa13.55□□□□□ -0.24
LRP8-208ENST00000475501 ZNF326Q5BKZ1 582 aaKnown RBP13.54□□□□□ -0.24
LRP8-208ENST00000475501 C14orf37Q86TY3 774 aa13.54□□□□□ -0.24
LRP8-208ENST00000475501 RBM33Q96EV2 1170 aaKnown RBP13.54□□□□□ -0.24
LRP8-208ENST00000475501 SPATA31A6Q5VVP1 1343 aa13.54□□□□□ -0.24
LRP8-208ENST00000475501 SHPRHQ149N8 1683 aa13.53□□□□□ -0.24
LRP8-208ENST00000475501 VGFO15240 615 aaPredicted RBP13.53□□□□□ -0.24
LRP8-208ENST00000475501 NUTM2DQ5VT03 806 aaPredicted RBP13.53□□□□□ -0.24
LRP8-208ENST00000475501 PPARGC1BQ86YN6 1023 aaKnown RBP13.53□□□□□ -0.24
LRP8-208ENST00000475501 RGS17Q9UGC6 210 aaPredicted RBP13.53□□□□□ -0.24
LRP8-208ENST00000475501 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
LRP8-208ENST00000475501 PPLO60437 1756 aa13.51□□□□□ -0.25
LRP8-208ENST00000475501 SENP3Q9H4L4 574 aaPredicted RBP13.51□□□□□ -0.25
LRP8-208ENST00000475501 SETD1AO15047 1707 aaKnown RBP13.5□□□□□ -0.25
LRP8-208ENST00000475501 PTCH1Q13635 1447 aa13.49□□□□□ -0.25
LRP8-208ENST00000475501 ADGRL3Q9HAR2 1447 aa13.49□□□□□ -0.25
LRP8-208ENST00000475501 METP08581 1390 aa13.49□□□□□ -0.25
LRP8-208ENST00000475501 SLC4A1APQ9BWU0 796 aaKnown RBP13.49□□□□□ -0.25
LRP8-208ENST00000475501 NHSL1Q5SYE7 1610 aa13.49□□□□□ -0.25
LRP8-208ENST00000475501 TRIM52Q96A61 297 aa13.48□□□□□ -0.25
LRP8-208ENST00000475501 MST1RQ04912 1400 aa13.47□□□□□ -0.25
LRP8-208ENST00000475501 SETD5Q9C0A6 1442 aa13.47□□□□□ -0.25
LRP8-208ENST00000475501 LAMC1P11047 1609 aa13.47□□□□□ -0.25
LRP8-208ENST00000475501 BRINP3Q76B58 766 aa13.47□□□□□ -0.25
LRP8-208ENST00000475501 NALCNQ8IZF0 1738 aa13.47□□□□□ -0.25
LRP8-208ENST00000475501 ASXL1Q8IXJ9 1541 aa13.46□□□□□ -0.25
LRP8-208ENST00000475501 ZNF772Q68DY9 489 aaPredicted RBP13.44□□□□□ -0.26
LRP8-208ENST00000475501 POTEAQ6S8J7 498 aa13.44□□□□□ -0.26
LRP8-208ENST00000475501 LRRC59Q96AG4 307 aaKnown RBP13.44□□□□□ -0.26
LRP8-208ENST00000475501 CCDC144AA2RUR9 1427 aa13.43□□□□□ -0.26
LRP8-208ENST00000475501 IFT172Q9UG01 1749 aa13.43□□□□□ -0.26
LRP8-208ENST00000475501 ANKRD30BQ9BXX2 1392 aa13.43□□□□□ -0.26
LRP8-208ENST00000475501 LRP6O75581 1613 aa13.41□□□□□ -0.26
LRP8-208ENST00000475501 SPATA31E1Q6ZUB1 1445 aa13.4□□□□□ -0.26
LRP8-208ENST00000475501 KNDC1Q76NI1 1749 aa13.4□□□□□ -0.26
LRP8-208ENST00000475501 MPHOSPH9Q99550 1183 aa13.4□□□□□ -0.26
LRP8-208ENST00000475501 C1orf167Q5SNV9 1468 aa13.4□□□□□ -0.26
LRP8-208ENST00000475501 TECPR2O15040 1411 aa13.39□□□□□ -0.27
LRP8-208ENST00000475501 MEX3CQ5U5Q3 659 aaKnown RBP13.39□□□□□ -0.27
LRP8-208ENST00000475501 CDK12Q9NYV4 1490 aaPredicted RBP13.39□□□□□ -0.27
LRP8-208ENST00000475501 CDC42BPGQ6DT37 1551 aa13.39□□□□□ -0.27
LRP8-208ENST00000475501 ROBO2Q9HCK4 1378 aa13.38□□□□□ -0.27
LRP8-208ENST00000475501 SOS2Q07890 1332 aaPredicted RBP13.37□□□□□ -0.27
LRP8-208ENST00000475501 ABCC11Q96J66 1382 aa13.36□□□□□ -0.27
LRP8-208ENST00000475501 SIRT1Q96EB6 747 aa13.36□□□□□ -0.27
LRP8-208ENST00000475501 LRPPRCP42704 1394 aaKnown RBP13.35□□□□□ -0.27
LRP8-208ENST00000475501 PNPLA6Q8IY17 1366 aa13.35□□□□□ -0.27
LRP8-208ENST00000475501 PIK3C2GO75747 1445 aa13.35□□□□□ -0.27
LRP8-208ENST00000475501 COL22A1Q8NFW1 1626 aaPredicted RBP13.35□□□□□ -0.27
LRP8-208ENST00000475501 RXRBP28702 533 aa13.33□□□□□ -0.28
LRP8-208ENST00000475501 MYOM2P54296 1465 aa13.33□□□□□ -0.28
LRP8-208ENST00000475501 ADGRF5Q8IZF2 1346 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 74.2 ms