RNA–Protein interactions for RNA: ENST00000475422.5

ITSN1-227, Transcript of intersectin 1, humanhuman

TSL 1 (best)

Gene ITSN1, Length 798 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN1-227ENST00000475422 PROSER2Q86WR7 435 aaPredicted RBP24.19■■□□□ 1.46
ITSN1-227ENST00000475422 TMEM94Q12767 1356 aa24.18■■□□□ 1.46
ITSN1-227ENST00000475422 ROCK1Q13464 1354 aa24.18■■□□□ 1.46
ITSN1-227ENST00000475422 HDGFP51858 240 aaKnown RBP24.18■■□□□ 1.46
ITSN1-227ENST00000475422 CHGAP10645 457 aaKnown RBP24.17■■□□□ 1.46
ITSN1-227ENST00000475422 PPARGC1BQ86YN6 1023 aaKnown RBP24.16■■□□□ 1.46
ITSN1-227ENST00000475422 MYO5BQ9ULV0 1848 aa24.16■■□□□ 1.46
ITSN1-227ENST00000475422 RBM33Q96EV2 1170 aaKnown RBP24.14■■□□□ 1.45
ITSN1-227ENST00000475422 RIMS2Q9UQ26 1411 aa24.14■■□□□ 1.45
ITSN1-227ENST00000475422 E9PCH4 1651 aa24.13■■□□□ 1.45
ITSN1-227ENST00000475422 TMEM131LA2VDJ0 1609 aa24.13■■□□□ 1.45
ITSN1-227ENST00000475422 ZFYVE9O95405 1425 aa24.12■■□□□ 1.45
ITSN1-227ENST00000475422 PLEKHG1Q9ULL1 1385 aa24.12■■□□□ 1.45
ITSN1-227ENST00000475422 NKTRP30414 1462 aaKnown RBP24.12■■□□□ 1.45
ITSN1-227ENST00000475422 IQGAP3Q86VI3 1631 aa24.11■■□□□ 1.45
ITSN1-227ENST00000475422 NUP155O75694 1391 aa24.11■■□□□ 1.45
ITSN1-227ENST00000475422 NWD1Q149M9 1564 aa24.11■■□□□ 1.45
ITSN1-227ENST00000475422 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.1■■□□□ 1.45
ITSN1-227ENST00000475422 FAM135BQ49AJ0 1406 aa24.1■■□□□ 1.45
ITSN1-227ENST00000475422 MSH6P52701 1360 aa24.07■■□□□ 1.44
ITSN1-227ENST00000475422 NUTM2DQ5VT03 806 aaPredicted RBP24.06■■□□□ 1.44
ITSN1-227ENST00000475422 TBX22Q9Y458 520 aa24.04■■□□□ 1.44
ITSN1-227ENST00000475422 CHD2O14647 1828 aaKnown RBP24.04■■□□□ 1.44
ITSN1-227ENST00000475422 ROBO1Q9Y6N7 1651 aa24.04■■□□□ 1.44
ITSN1-227ENST00000475422 C14orf37Q86TY3 774 aa24■■□□□ 1.43
ITSN1-227ENST00000475422 SLAIN2Q9P270 581 aa23.99■■□□□ 1.43
ITSN1-227ENST00000475422 DIP2AQ14689 1571 aa23.97■■□□□ 1.43
ITSN1-227ENST00000475422 ADAMTS13Q76LX8 1427 aa23.96■■□□□ 1.43
ITSN1-227ENST00000475422 PIK3R4Q99570 1358 aa23.94■■□□□ 1.42
ITSN1-227ENST00000475422 SPHKAPQ2M3C7 1700 aa23.94■■□□□ 1.42
ITSN1-227ENST00000475422 ZNF326Q5BKZ1 582 aaKnown RBP23.93■■□□□ 1.42
ITSN1-227ENST00000475422 NCOA3Q9Y6Q9 1424 aa23.93■■□□□ 1.42
ITSN1-227ENST00000475422 TRPM2O94759 1503 aa23.92■■□□□ 1.42
ITSN1-227ENST00000475422 PHLPP1O60346 1717 aa23.91■■□□□ 1.42
ITSN1-227ENST00000475422 ATF3P18847 181 aa23.9■■□□□ 1.42
ITSN1-227ENST00000475422 RGS17Q9UGC6 210 aaPredicted RBP23.9■■□□□ 1.42
ITSN1-227ENST00000475422 C19orf44Q9H6X5 657 aa23.89■■□□□ 1.41
ITSN1-227ENST00000475422 AMOTL2Q9Y2J4 779 aa23.89■■□□□ 1.41
ITSN1-227ENST00000475422 RRBP1Q9P2E9 1410 aaKnown RBP23.89■■□□□ 1.41
ITSN1-227ENST00000475422 CADPS2Q86UW7 1296 aa23.88■■□□□ 1.41
ITSN1-227ENST00000475422 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.86■■□□□ 1.41
ITSN1-227ENST00000475422 JCADQ9P266 1359 aa23.85■■□□□ 1.41
ITSN1-227ENST00000475422 NAIPQ13075 1403 aa23.84■■□□□ 1.41
ITSN1-227ENST00000475422 PTPRUQ92729 1446 aa23.84■■□□□ 1.41
ITSN1-227ENST00000475422 SETBP1Q9Y6X0 1596 aa23.83■■□□□ 1.41
ITSN1-227ENST00000475422 TRIM52Q96A61 297 aa23.82■■□□□ 1.4
ITSN1-227ENST00000475422 CLTCL1P53675 1640 aa23.81■■□□□ 1.4
ITSN1-227ENST00000475422 NRXN3Q9Y4C0 1643 aa23.81■■□□□ 1.4
ITSN1-227ENST00000475422 POTEAQ6S8J7 498 aa23.79■■□□□ 1.4
ITSN1-227ENST00000475422 COL16A1Q07092 1604 aaPredicted RBP23.79■■□□□ 1.4
ITSN1-227ENST00000475422 KIF1BO60333 1816 aa23.79■■□□□ 1.4
ITSN1-227ENST00000475422 XRN1Q8IZH2 1706 aaKnown RBP23.77■■□□□ 1.4
ITSN1-227ENST00000475422 METP08581 1390 aa23.77■■□□□ 1.4
ITSN1-227ENST00000475422 NEXMIFQ5QGS0 1516 aa23.76■■□□□ 1.39
ITSN1-227ENST00000475422 HFM1A2PYH4 1435 aa23.75■■□□□ 1.39
ITSN1-227ENST00000475422 DCCP43146 1447 aa23.75■■□□□ 1.39
ITSN1-227ENST00000475422 AHDC1Q5TGY3 1603 aaPredicted RBP23.74■■□□□ 1.39
ITSN1-227ENST00000475422 MEX3CQ5U5Q3 659 aaKnown RBP23.74■■□□□ 1.39
ITSN1-227ENST00000475422 BRINP3Q76B58 766 aa23.74■■□□□ 1.39
ITSN1-227ENST00000475422 SLC4A1APQ9BWU0 796 aaKnown RBP23.74■■□□□ 1.39
ITSN1-227ENST00000475422 SPATA31A6Q5VVP1 1343 aa23.73■■□□□ 1.39
ITSN1-227ENST00000475422 VGFO15240 615 aaPredicted RBP23.7■■□□□ 1.38
ITSN1-227ENST00000475422 SHPRHQ149N8 1683 aa23.68■■□□□ 1.38
ITSN1-227ENST00000475422 LRP6O75581 1613 aa23.67■■□□□ 1.38
ITSN1-227ENST00000475422 ASXL1Q8IXJ9 1541 aa23.67■■□□□ 1.38
ITSN1-227ENST00000475422 MST1RQ04912 1400 aa23.67■■□□□ 1.38
ITSN1-227ENST00000475422 ADGRL3Q9HAR2 1447 aa23.67■■□□□ 1.38
ITSN1-227ENST00000475422 RPGRIP1LQ68CZ1 1315 aa23.64■■□□□ 1.38
ITSN1-227ENST00000475422 NUTM2BA6NNL0 878 aaPredicted RBP23.63■■□□□ 1.37
ITSN1-227ENST00000475422 NUTM2EB1AL46 878 aaPredicted RBP23.63■■□□□ 1.37
ITSN1-227ENST00000475422 ZNF772Q68DY9 489 aaPredicted RBP23.63■■□□□ 1.37
ITSN1-227ENST00000475422 NUTM2AQ8IVF1 878 aaPredicted RBP23.63■■□□□ 1.37
ITSN1-227ENST00000475422 NALCNQ8IZF0 1738 aa23.63■■□□□ 1.37
ITSN1-227ENST00000475422 FOXD1Q16676 465 aa23.61■■□□□ 1.37
ITSN1-227ENST00000475422 NHSL1Q5SYE7 1610 aa23.6■■□□□ 1.37
ITSN1-227ENST00000475422 LRRC59Q96AG4 307 aaKnown RBP23.6■■□□□ 1.37
ITSN1-227ENST00000475422 SETD5Q9C0A6 1442 aa23.59■■□□□ 1.37
ITSN1-227ENST00000475422 SETD1AO15047 1707 aaKnown RBP23.59■■□□□ 1.37
ITSN1-227ENST00000475422 PTCH1Q13635 1447 aa23.59■■□□□ 1.37
ITSN1-227ENST00000475422 PPLO60437 1756 aa23.58■■□□□ 1.37
ITSN1-227ENST00000475422 DDX17Q92841 729 aaKnown RBP23.58■■□□□ 1.37
ITSN1-227ENST00000475422 ROBO2Q9HCK4 1378 aa23.57■■□□□ 1.36
ITSN1-227ENST00000475422 CCDC144AA2RUR9 1427 aa23.56■■□□□ 1.36
ITSN1-227ENST00000475422 C1orf167Q5SNV9 1468 aa23.55■■□□□ 1.36
ITSN1-227ENST00000475422 RGL3Q3MIN7 710 aa23.53■■□□□ 1.36
ITSN1-227ENST00000475422 MPHOSPH9Q99550 1183 aa23.52■■□□□ 1.36
ITSN1-227ENST00000475422 RXRBP28702 533 aa23.5■■□□□ 1.35
ITSN1-227ENST00000475422 AFF2P51816 1311 aa23.5■■□□□ 1.35
ITSN1-227ENST00000475422 PNPLA6Q8IY17 1366 aa23.5■■□□□ 1.35
ITSN1-227ENST00000475422 PRAG1Q86YV5 1406 aa23.5■■□□□ 1.35
ITSN1-227ENST00000475422 ORAI2Q96SN7 254 aa23.49■■□□□ 1.35
ITSN1-227ENST00000475422 ADGRF5Q8IZF2 1346 aa23.49■■□□□ 1.35
ITSN1-227ENST00000475422 C8orf37Q96NL8 207 aa23.48■■□□□ 1.35
ITSN1-227ENST00000475422 ANKRD30BQ9BXX2 1392 aa23.46■■□□□ 1.35
ITSN1-227ENST00000475422 STK26Q9P289 416 aa23.46■■□□□ 1.35
ITSN1-227ENST00000475422 SPATA31E1Q6ZUB1 1445 aa23.45■■□□□ 1.34
ITSN1-227ENST00000475422 ADAMTS2O95450 1211 aa23.44■■□□□ 1.34
ITSN1-227ENST00000475422 LAMC1P11047 1609 aa23.44■■□□□ 1.34
ITSN1-227ENST00000475422 SOS2Q07890 1332 aaPredicted RBP23.43■■□□□ 1.34
ITSN1-227ENST00000475422 ACIN1Q9UKV3 1341 aaKnown RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms