RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 JCADQ9P266 1359 aa28.35■■■□□ 2.13
RNF220-212ENST00000475378 SLAIN2Q9P270 581 aa28.34■■■□□ 2.13
RNF220-212ENST00000475378 ZFYVE9O95405 1425 aa28.3■■■□□ 2.12
RNF220-212ENST00000475378 ANKRD30AQ9BXX3 1397 aa28.29■■■□□ 2.12
RNF220-212ENST00000475378 SLC52A1Q9NWF4 448 aa28.29■■■□□ 2.12
RNF220-212ENST00000475378 FGD6Q6ZV73 1430 aa28.27■■■□□ 2.12
RNF220-212ENST00000475378 GCC2Q8IWJ2 1684 aa28.27■■■□□ 2.12
RNF220-212ENST00000475378 LRP6O75581 1613 aa28.27■■■□□ 2.12
RNF220-212ENST00000475378 PLEKHG1Q9ULL1 1385 aa28.26■■■□□ 2.12
RNF220-212ENST00000475378 RPRD2Q5VT52 1461 aaKnown RBP28.25■■■□□ 2.11
RNF220-212ENST00000475378 CHIC2Q9UKJ5 165 aa28.24■■■□□ 2.11
RNF220-212ENST00000475378 TMEM131LA2VDJ0 1609 aa28.24■■■□□ 2.11
RNF220-212ENST00000475378 LOC105371045A0A1W2PR82 267 aa28.23■■■□□ 2.11
RNF220-212ENST00000475378 BCANQ96GW7 911 aa28.23■■■□□ 2.11
RNF220-212ENST00000475378 NCOA3Q9Y6Q9 1424 aa28.23■■■□□ 2.11
RNF220-212ENST00000475378 SHPRHQ149N8 1683 aa28.22■■■□□ 2.11
RNF220-212ENST00000475378 AHDC1Q5TGY3 1603 aaPredicted RBP28.21■■■□□ 2.11
RNF220-212ENST00000475378 ADGRL2O95490 1459 aa28.21■■■□□ 2.11
RNF220-212ENST00000475378 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.21■■■□□ 2.11
RNF220-212ENST00000475378 SPATA31A6Q5VVP1 1343 aa28.2■■■□□ 2.11
RNF220-212ENST00000475378 RIMS2Q9UQ26 1411 aa28.2■■■□□ 2.11
RNF220-212ENST00000475378 UPF1Q92900 1129 aaKnown RBP eCLIP28.17■■■□□ 2.1
RNF220-212ENST00000475378 TBX22Q9Y458 520 aa28.17■■■□□ 2.1
RNF220-212ENST00000475378 ADAMTS13Q76LX8 1427 aa28.14■■■□□ 2.1
RNF220-212ENST00000475378 ZNF772Q68DY9 489 aaPredicted RBP28.13■■■□□ 2.09
RNF220-212ENST00000475378 DIP2AQ14689 1571 aa28.12■■■□□ 2.09
RNF220-212ENST00000475378 PPP1R15AO75807 674 aaPredicted RBP28.12■■■□□ 2.09
RNF220-212ENST00000475378 HDGFP51858 240 aaKnown RBP28.12■■■□□ 2.09
RNF220-212ENST00000475378 ANKRD50Q9ULJ7 1429 aa28.1■■■□□ 2.09
RNF220-212ENST00000475378 MEX3CQ5U5Q3 659 aaKnown RBP28.09■■■□□ 2.09
RNF220-212ENST00000475378 CADPS2Q86UW7 1296 aa28.09■■■□□ 2.09
RNF220-212ENST00000475378 TRIM52Q96A61 297 aa28.09■■■□□ 2.09
RNF220-212ENST00000475378 C19orf44Q9H6X5 657 aa28.08■■■□□ 2.09
RNF220-212ENST00000475378 PIK3R4Q99570 1358 aa28.08■■■□□ 2.09
RNF220-212ENST00000475378 E9PCH4 1651 aa28.07■■■□□ 2.08
RNF220-212ENST00000475378 C14orf37Q86TY3 774 aa28.06■■■□□ 2.08
RNF220-212ENST00000475378 UNC13BO14795 1591 aa28.06■■■□□ 2.08
RNF220-212ENST00000475378 APLP2Q06481 763 aa28.05■■■□□ 2.08
RNF220-212ENST00000475378 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.05■■■□□ 2.08
RNF220-212ENST00000475378 CDK12Q9NYV4 1490 aaPredicted RBP28.04■■■□□ 2.08
RNF220-212ENST00000475378 ATF3P18847 181 aa28.03■■■□□ 2.08
RNF220-212ENST00000475378 TRPM2O94759 1503 aa28.02■■■□□ 2.08
RNF220-212ENST00000475378 RXRBP28702 533 aa28.01■■■□□ 2.07
RNF220-212ENST00000475378 NUTM2DQ5VT03 806 aaPredicted RBP28.01■■■□□ 2.07
RNF220-212ENST00000475378 BRINP3Q76B58 766 aa28.01■■■□□ 2.07
RNF220-212ENST00000475378 PTPRUQ92729 1446 aa28.01■■■□□ 2.07
RNF220-212ENST00000475378 NHSL1Q5SYE7 1610 aa28■■■□□ 2.07
RNF220-212ENST00000475378 CHGAP10645 457 aaKnown RBP27.98■■■□□ 2.07
RNF220-212ENST00000475378 DCCP43146 1447 aa27.98■■■□□ 2.07
RNF220-212ENST00000475378 XRN1Q8IZH2 1706 aaKnown RBP27.97■■■□□ 2.07
RNF220-212ENST00000475378 ASXL1Q8IXJ9 1541 aa27.97■■■□□ 2.07
RNF220-212ENST00000475378 SETD5Q9C0A6 1442 aa27.96■■■□□ 2.07
RNF220-212ENST00000475378 AMOTL2Q9Y2J4 779 aa27.96■■■□□ 2.07
RNF220-212ENST00000475378 IQGAP3Q86VI3 1631 aa27.95■■■□□ 2.06
RNF220-212ENST00000475378 NRXN3Q9Y4C0 1643 aa27.95■■■□□ 2.06
RNF220-212ENST00000475378 NUTM2BA6NNL0 878 aaPredicted RBP27.94■■■□□ 2.06
RNF220-212ENST00000475378 NUTM2EB1AL46 878 aaPredicted RBP27.94■■■□□ 2.06
RNF220-212ENST00000475378 NUTM2AQ8IVF1 878 aaPredicted RBP27.94■■■□□ 2.06
RNF220-212ENST00000475378 AFF2P51816 1311 aa27.92■■■□□ 2.06
RNF220-212ENST00000475378 FAM50AQ14320 339 aaKnown RBP27.92■■■□□ 2.06
RNF220-212ENST00000475378 MST1RQ04912 1400 aa27.92■■■□□ 2.06
RNF220-212ENST00000475378 SETBP1Q9Y6X0 1596 aa27.89■■■□□ 2.05
RNF220-212ENST00000475378 RGS12O14924 1447 aa27.87■■■□□ 2.05
RNF220-212ENST00000475378 SRCAPQ6ZRS2 3230 aa27.86■■■□□ 2.05
RNF220-212ENST00000475378 LRRC59Q96AG4 307 aaKnown RBP27.83■■■□□ 2.05
RNF220-212ENST00000475378 PNPLA6Q8IY17 1366 aa27.82■■■□□ 2.04
RNF220-212ENST00000475378 NALCNQ8IZF0 1738 aa27.81■■■□□ 2.04
RNF220-212ENST00000475378 RBM6P78332 1123 aaKnown RBP27.8■■■□□ 2.04
RNF220-212ENST00000475378 ROCK1Q13464 1354 aa27.8■■■□□ 2.04
RNF220-212ENST00000475378 SPHKAPQ2M3C7 1700 aa27.8■■■□□ 2.04
RNF220-212ENST00000475378 C8orf37Q96NL8 207 aa27.79■■■□□ 2.04
RNF220-212ENST00000475378 QTRT2Q9H974 415 aaKnown RBP27.79■■■□□ 2.04
RNF220-212ENST00000475378 ADGRL3Q9HAR2 1447 aa27.78■■■□□ 2.04
RNF220-212ENST00000475378 METP08581 1390 aa27.78■■■□□ 2.04
RNF220-212ENST00000475378 DDX17Q92841 729 aaKnown RBP27.78■■■□□ 2.04
RNF220-212ENST00000475378 LAMC1P11047 1609 aa27.78■■■□□ 2.04
RNF220-212ENST00000475378 NUP155O75694 1391 aa27.75■■■□□ 2.03
RNF220-212ENST00000475378 NEXMIFQ5QGS0 1516 aa27.69■■■□□ 2.02
RNF220-212ENST00000475378 C1orf167Q5SNV9 1468 aa27.69■■■□□ 2.02
RNF220-212ENST00000475378 NGLY1Q96IV0 654 aa27.66■■■□□ 2.02
RNF220-212ENST00000475378 EP400Q96L91 3159 aa27.66■■■□□ 2.02
RNF220-212ENST00000475378 ADAMTS2O95450 1211 aa27.65■■■□□ 2.02
RNF220-212ENST00000475378 CLTCL1P53675 1640 aa27.64■■■□□ 2.02
RNF220-212ENST00000475378 ATAD2Q6PL18 1390 aa27.64■■■□□ 2.02
RNF220-212ENST00000475378 ZNF326Q5BKZ1 582 aaKnown RBP27.64■■■□□ 2.02
RNF220-212ENST00000475378 SOS2Q07890 1332 aaPredicted RBP27.63■■■□□ 2.01
RNF220-212ENST00000475378 COL22A1Q8NFW1 1626 aaPredicted RBP27.62■■■□□ 2.01
RNF220-212ENST00000475378 KIF1BO60333 1816 aa27.61■■■□□ 2.01
RNF220-212ENST00000475378 PTCH1Q13635 1447 aa27.6■■■□□ 2.01
RNF220-212ENST00000475378 USP21Q9UK80 565 aa27.59■■■□□ 2.01
RNF220-212ENST00000475378 ATRNO75882 1429 aa27.58■■■□□ 2.01
RNF220-212ENST00000475378 FNBP4Q8N3X1 1017 aaPredicted RBP27.58■■■□□ 2.01
RNF220-212ENST00000475378 TRPC5Q9UL62 973 aaPredicted RBP27.58■■■□□ 2.01
RNF220-212ENST00000475378 ORAI2Q96SN7 254 aa27.57■■■□□ 2
RNF220-212ENST00000475378 MARF1Q9Y4F3 1742 aaKnown RBP27.56■■■□□ 2
RNF220-212ENST00000475378 PRAG1Q86YV5 1406 aa27.56■■■□□ 2
RNF220-212ENST00000475378 ROBO2Q9HCK4 1378 aa27.55■■■□□ 2
RNF220-212ENST00000475378 MYOM2P54296 1465 aa27.51■■■□□ 2
RNF220-212ENST00000475378 ITGAEP38570 1179 aa27.49■■□□□ 1.99
RNF220-212ENST00000475378 ZRANB1Q9UGI0 708 aa27.49■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms