RNA–Protein interactions for RNA: ENST00000475340.1

CFAP46-206, Transcript of cilia and flagella associated protein 46, humanhuman

TSL 1 (best)

Gene CFAP46, Length 1,156 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP46-206ENST00000475340 TMEM131LA2VDJ0 1609 aa24.67■■□□□ 1.54
CFAP46-206ENST00000475340 SLC52A1Q9NWF4 448 aa24.66■■□□□ 1.54
CFAP46-206ENST00000475340 CHD2O14647 1828 aaKnown RBP24.64■■□□□ 1.54
CFAP46-206ENST00000475340 SPHKAPQ2M3C7 1700 aa24.63■■□□□ 1.53
CFAP46-206ENST00000475340 HSPA1LP34931 641 aa24.62■■□□□ 1.53
CFAP46-206ENST00000475340 PPARGC1BQ86YN6 1023 aaKnown RBP24.62■■□□□ 1.53
CFAP46-206ENST00000475340 ITGAEP38570 1179 aa24.61■■□□□ 1.53
CFAP46-206ENST00000475340 ILDR2Q71H61 639 aa24.59■■□□□ 1.53
CFAP46-206ENST00000475340 NWD1Q149M9 1564 aa24.59■■□□□ 1.53
CFAP46-206ENST00000475340 MED1Q15648 1581 aaPredicted RBP24.59■■□□□ 1.53
CFAP46-206ENST00000475340 ZFYVE9O95405 1425 aa24.55■■□□□ 1.52
CFAP46-206ENST00000475340 BCANQ96GW7 911 aa24.54■■□□□ 1.52
CFAP46-206ENST00000475340 SLC26A8Q96RN1 970 aa24.54■■□□□ 1.52
CFAP46-206ENST00000475340 NUP155O75694 1391 aa24.54■■□□□ 1.52
CFAP46-206ENST00000475340 NKTRP30414 1462 aaKnown RBP24.53■■□□□ 1.52
CFAP46-206ENST00000475340 RIMS2Q9UQ26 1411 aa24.52■■□□□ 1.52
CFAP46-206ENST00000475340 PPP4R3CPQ6ZMV5 832 aa24.52■■□□□ 1.52
CFAP46-206ENST00000475340 KIF1BO60333 1816 aa24.51■■□□□ 1.51
CFAP46-206ENST00000475340 PPP1R15AO75807 674 aaPredicted RBP24.51■■□□□ 1.51
CFAP46-206ENST00000475340 HDGFP51858 240 aaKnown RBP24.51■■□□□ 1.51
CFAP46-206ENST00000475340 KCNA6P17658 529 aa24.5■■□□□ 1.51
CFAP46-206ENST00000475340 PLEKHG1Q9ULL1 1385 aa24.5■■□□□ 1.51
CFAP46-206ENST00000475340 CHGAP10645 457 aaKnown RBP24.49■■□□□ 1.51
CFAP46-206ENST00000475340 ROBO1Q9Y6N7 1651 aa24.49■■□□□ 1.51
CFAP46-206ENST00000475340 RRBP1Q9P2E9 1410 aaKnown RBP24.48■■□□□ 1.51
CFAP46-206ENST00000475340 DIP2AQ14689 1571 aa24.47■■□□□ 1.51
CFAP46-206ENST00000475340 TMEM94Q12767 1356 aa24.47■■□□□ 1.51
CFAP46-206ENST00000475340 SOCS7O14512 581 aa24.45■■□□□ 1.5
CFAP46-206ENST00000475340 PROSER2Q86WR7 435 aaPredicted RBP24.45■■□□□ 1.5
CFAP46-206ENST00000475340 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.44■■□□□ 1.5
CFAP46-206ENST00000475340 CLTCL1P53675 1640 aa24.39■■□□□ 1.5
CFAP46-206ENST00000475340 PHLPP1O60346 1717 aa24.39■■□□□ 1.5
CFAP46-206ENST00000475340 TRPM2O94759 1503 aa24.39■■□□□ 1.49
CFAP46-206ENST00000475340 MSH6P52701 1360 aa24.39■■□□□ 1.49
CFAP46-206ENST00000475340 RBM33Q96EV2 1170 aaKnown RBP24.38■■□□□ 1.49
CFAP46-206ENST00000475340 FAM135BQ49AJ0 1406 aa24.37■■□□□ 1.49
CFAP46-206ENST00000475340 NRXN3Q9Y4C0 1643 aa24.37■■□□□ 1.49
CFAP46-206ENST00000475340 NUTM2DQ5VT03 806 aaPredicted RBP24.37■■□□□ 1.49
CFAP46-206ENST00000475340 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.37■■□□□ 1.49
CFAP46-206ENST00000475340 NAIPQ13075 1403 aa24.36■■□□□ 1.49
CFAP46-206ENST00000475340 TBX22Q9Y458 520 aa24.36■■□□□ 1.49
CFAP46-206ENST00000475340 ADAMTS13Q76LX8 1427 aa24.35■■□□□ 1.49
CFAP46-206ENST00000475340 SETBP1Q9Y6X0 1596 aa24.33■■□□□ 1.48
CFAP46-206ENST00000475340 PIK3R4Q99570 1358 aa24.32■■□□□ 1.48
CFAP46-206ENST00000475340 XRN1Q8IZH2 1706 aaKnown RBP24.31■■□□□ 1.48
CFAP46-206ENST00000475340 HFM1A2PYH4 1435 aa24.29■■□□□ 1.48
CFAP46-206ENST00000475340 NCOA3Q9Y6Q9 1424 aa24.28■■□□□ 1.48
CFAP46-206ENST00000475340 ZNF326Q5BKZ1 582 aaKnown RBP24.28■■□□□ 1.48
CFAP46-206ENST00000475340 NEXMIFQ5QGS0 1516 aa24.28■■□□□ 1.48
CFAP46-206ENST00000475340 C14orf37Q86TY3 774 aa24.27■■□□□ 1.48
CFAP46-206ENST00000475340 PPLO60437 1756 aa24.26■■□□□ 1.47
CFAP46-206ENST00000475340 SLAIN2Q9P270 581 aa24.24■■□□□ 1.47
CFAP46-206ENST00000475340 TRIM52Q96A61 297 aa24.23■■□□□ 1.47
CFAP46-206ENST00000475340 SETD1AO15047 1707 aaKnown RBP24.22■■□□□ 1.47
CFAP46-206ENST00000475340 COL16A1Q07092 1604 aaPredicted RBP24.22■■□□□ 1.47
CFAP46-206ENST00000475340 PTPRUQ92729 1446 aa24.21■■□□□ 1.47
CFAP46-206ENST00000475340 AMOTL2Q9Y2J4 779 aa24.2■■□□□ 1.46
CFAP46-206ENST00000475340 NALCNQ8IZF0 1738 aa24.19■■□□□ 1.46
CFAP46-206ENST00000475340 ATF3P18847 181 aa24.17■■□□□ 1.46
CFAP46-206ENST00000475340 CADPS2Q86UW7 1296 aa24.17■■□□□ 1.46
CFAP46-206ENST00000475340 C19orf44Q9H6X5 657 aa24.17■■□□□ 1.46
CFAP46-206ENST00000475340 SHPRHQ149N8 1683 aa24.16■■□□□ 1.46
CFAP46-206ENST00000475340 HOXD11P31277 338 aaPredicted RBP24.16■■□□□ 1.46
CFAP46-206ENST00000475340 AHDC1Q5TGY3 1603 aaPredicted RBP24.16■■□□□ 1.46
CFAP46-206ENST00000475340 SLC4A1APQ9BWU0 796 aaKnown RBP24.15■■□□□ 1.46
CFAP46-206ENST00000475340 IFT172Q9UG01 1749 aa24.14■■□□□ 1.45
CFAP46-206ENST00000475340 DCCP43146 1447 aa24.13■■□□□ 1.45
CFAP46-206ENST00000475340 METP08581 1390 aa24.13■■□□□ 1.45
CFAP46-206ENST00000475340 DCAF8L1A6NGE4 600 aa24.12■■□□□ 1.45
CFAP46-206ENST00000475340 NHSL1Q5SYE7 1610 aa24.12■■□□□ 1.45
CFAP46-206ENST00000475340 JCADQ9P266 1359 aa24.11■■□□□ 1.45
CFAP46-206ENST00000475340 CNKSR2Q8WXI2 1034 aa24.09■■□□□ 1.45
CFAP46-206ENST00000475340 VGFO15240 615 aaPredicted RBP24.07■■□□□ 1.44
CFAP46-206ENST00000475340 RGS17Q9UGC6 210 aaPredicted RBP24.07■■□□□ 1.44
CFAP46-206ENST00000475340 ASXL1Q8IXJ9 1541 aa24.06■■□□□ 1.44
CFAP46-206ENST00000475340 ADGRL3Q9HAR2 1447 aa24.06■■□□□ 1.44
CFAP46-206ENST00000475340 RPGRIP1LQ68CZ1 1315 aa24.05■■□□□ 1.44
CFAP46-206ENST00000475340 MST1RQ04912 1400 aa24.03■■□□□ 1.44
CFAP46-206ENST00000475340 CCDC144AA2RUR9 1427 aa24.02■■□□□ 1.44
CFAP46-206ENST00000475340 PTCH1Q13635 1447 aa24.01■■□□□ 1.43
CFAP46-206ENST00000475340 BRINP3Q76B58 766 aa24.01■■□□□ 1.43
CFAP46-206ENST00000475340 SPATA31A6Q5VVP1 1343 aa23.99■■□□□ 1.43
CFAP46-206ENST00000475340 LRP6O75581 1613 aa23.98■■□□□ 1.43
CFAP46-206ENST00000475340 KNDC1Q76NI1 1749 aa23.98■■□□□ 1.43
CFAP46-206ENST00000475340 CACNB1Q02641 598 aaPredicted RBP23.96■■□□□ 1.43
CFAP46-206ENST00000475340 MPHOSPH9Q99550 1183 aa23.96■■□□□ 1.43
CFAP46-206ENST00000475340 LAMC1P11047 1609 aa23.95■■□□□ 1.43
CFAP46-206ENST00000475340 PRAG1Q86YV5 1406 aa23.95■■□□□ 1.42
CFAP46-206ENST00000475340 POTEAQ6S8J7 498 aa23.95■■□□□ 1.42
CFAP46-206ENST00000475340 ACIN1Q9UKV3 1341 aaKnown RBP23.94■■□□□ 1.42
CFAP46-206ENST00000475340 MEX3CQ5U5Q3 659 aaKnown RBP23.94■■□□□ 1.42
CFAP46-206ENST00000475340 ROBO2Q9HCK4 1378 aa23.93■■□□□ 1.42
CFAP46-206ENST00000475340 SPATA31E1Q6ZUB1 1445 aa23.93■■□□□ 1.42
CFAP46-206ENST00000475340 RNF216Q9NWF9 866 aaPredicted RBP23.92■■□□□ 1.42
CFAP46-206ENST00000475340 SETD5Q9C0A6 1442 aa23.92■■□□□ 1.42
CFAP46-206ENST00000475340 RGL3Q3MIN7 710 aa23.9■■□□□ 1.42
CFAP46-206ENST00000475340 CDC42BPGQ6DT37 1551 aa23.9■■□□□ 1.42
CFAP46-206ENST00000475340 ANKRD30BQ9BXX2 1392 aa23.9■■□□□ 1.42
CFAP46-206ENST00000475340 C1orf167Q5SNV9 1468 aa23.89■■□□□ 1.42
CFAP46-206ENST00000475340 RGPD8O14715 1765 aaPredicted RBP23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms