RNA–Protein interactions for RNA: ENST00000475323.5

ARHGEF39-203, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

TSL 2

Gene ARHGEF39, Length 2,862 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-203ENST00000475323 PREX2Q70Z35 1606 aa17.65■□□□□ 0.42
ARHGEF39-203ENST00000475323 UNC13BO14795 1591 aa17.64■□□□□ 0.41
ARHGEF39-203ENST00000475323 BCAR3O75815 825 aa17.64■□□□□ 0.41
ARHGEF39-203ENST00000475323 RSPH4AQ5TD94 716 aa17.64■□□□□ 0.41
ARHGEF39-203ENST00000475323 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.63■□□□□ 0.41
ARHGEF39-203ENST00000475323 SLFN5Q08AF3 891 aa17.63■□□□□ 0.41
ARHGEF39-203ENST00000475323 ARHGAP5Q13017 1502 aa17.63■□□□□ 0.41
ARHGEF39-203ENST00000475323 APAF1O14727 1248 aa17.62■□□□□ 0.41
ARHGEF39-203ENST00000475323 FRAT2O75474 233 aaPredicted RBP17.61■□□□□ 0.41
ARHGEF39-203ENST00000475323 DMRT2Q9Y5R5 561 aa17.61■□□□□ 0.41
ARHGEF39-203ENST00000475323 TTC37Q6PGP7 1564 aa17.61■□□□□ 0.41
ARHGEF39-203ENST00000475323 EIF2AK4Q9P2K8 1649 aaKnown RBP17.6■□□□□ 0.41
ARHGEF39-203ENST00000475323 CHD1O14646 1710 aa17.6■□□□□ 0.41
ARHGEF39-203ENST00000475323 IQGAP3Q86VI3 1631 aa17.59■□□□□ 0.41
ARHGEF39-203ENST00000475323 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.59■□□□□ 0.41
ARHGEF39-203ENST00000475323 IGHDP01880 384 aa17.58■□□□□ 0.4
ARHGEF39-203ENST00000475323 RNF17Q9BXT8 1623 aaKnown RBP17.56■□□□□ 0.4
ARHGEF39-203ENST00000475323 TRMT2AQ8IZ69 625 aaKnown RBP17.56■□□□□ 0.4
ARHGEF39-203ENST00000475323 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.55■□□□□ 0.4
ARHGEF39-203ENST00000475323 MAST1Q9Y2H9 1570 aa17.54■□□□□ 0.4
ARHGEF39-203ENST00000475323 SEC24BO95487 1268 aa17.54■□□□□ 0.4
ARHGEF39-203ENST00000475323 ATP10AO60312 1499 aa17.53■□□□□ 0.4
ARHGEF39-203ENST00000475323 ASXL1Q8IXJ9 1541 aa17.53■□□□□ 0.4
ARHGEF39-203ENST00000475323 PANK1Q8TE04 598 aa17.52■□□□□ 0.39
ARHGEF39-203ENST00000475323 MADDQ8WXG6 1647 aa17.52■□□□□ 0.39
ARHGEF39-203ENST00000475323 USP19O94966 1318 aa17.51■□□□□ 0.39
ARHGEF39-203ENST00000475323 NKTRP30414 1462 aaKnown RBP17.51■□□□□ 0.39
ARHGEF39-203ENST00000475323 IQGAP1P46940 1657 aa17.51■□□□□ 0.39
ARHGEF39-203ENST00000475323 DUOX2Q9NRD8 1548 aa17.5■□□□□ 0.39
ARHGEF39-203ENST00000475323 PIK3C2GO75747 1445 aa17.5■□□□□ 0.39
ARHGEF39-203ENST00000475323 PLXNC1O60486 1568 aa17.5■□□□□ 0.39
ARHGEF39-203ENST00000475323 COG6Q9Y2V7 657 aa17.5■□□□□ 0.39
ARHGEF39-203ENST00000475323 CDCA8Q53HL2 280 aa17.49■□□□□ 0.39
ARHGEF39-203ENST00000475323 EIF3AQ14152 1382 aaKnown RBP17.49■□□□□ 0.39
ARHGEF39-203ENST00000475323 SYNMO15061 1565 aa17.49■□□□□ 0.39
ARHGEF39-203ENST00000475323 SCAF11Q99590 1463 aaKnown RBP17.48■□□□□ 0.39
ARHGEF39-203ENST00000475323 NEUROD2Q15784 382 aa17.48■□□□□ 0.39
ARHGEF39-203ENST00000475323 CARD14Q9BXL6 1004 aa17.48■□□□□ 0.39
ARHGEF39-203ENST00000475323 MYOM1P52179 1685 aa17.48■□□□□ 0.39
ARHGEF39-203ENST00000475323 E9PSI1 815 aa17.48■□□□□ 0.39
ARHGEF39-203ENST00000475323 CLASP1Q7Z460 1538 aa17.47■□□□□ 0.39
ARHGEF39-203ENST00000475323 ERCC6L2Q5T890 1561 aa17.46■□□□□ 0.39
ARHGEF39-203ENST00000475323 CFAP70Q5T0N1 1121 aa17.46■□□□□ 0.39
ARHGEF39-203ENST00000475323 TRAPPC8Q9Y2L5 1435 aa17.46■□□□□ 0.39
ARHGEF39-203ENST00000475323 CANXP27824 592 aaKnown RBP17.46■□□□□ 0.38
ARHGEF39-203ENST00000475323 AFAP1Q8N556 730 aa17.46■□□□□ 0.38
ARHGEF39-203ENST00000475323 TNNQ9UQP3 1299 aa17.46■□□□□ 0.38
ARHGEF39-203ENST00000475323 RRP7AQ9Y3A4 280 aaKnown RBP17.46■□□□□ 0.38
ARHGEF39-203ENST00000475323 PLEKHG5O94827 1062 aa17.45■□□□□ 0.38
ARHGEF39-203ENST00000475323 TNNT2P45379 298 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF39-203ENST00000475323 SLKQ9H2G2 1235 aaPredicted RBP17.45■□□□□ 0.38
ARHGEF39-203ENST00000475323 CLUAP1Q96AJ1 413 aa17.44■□□□□ 0.38
ARHGEF39-203ENST00000475323 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
ARHGEF39-203ENST00000475323 WWC1Q8IX03 1113 aa17.43■□□□□ 0.38
ARHGEF39-203ENST00000475323 POGKQ9P215 609 aa17.43■□□□□ 0.38
ARHGEF39-203ENST00000475323 ABCC2Q92887 1545 aa17.43■□□□□ 0.38
ARHGEF39-203ENST00000475323 SHROOM2Q13796 1616 aa17.42■□□□□ 0.38
ARHGEF39-203ENST00000475323 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
ARHGEF39-203ENST00000475323 SPHKAPQ2M3C7 1700 aa17.42■□□□□ 0.38
ARHGEF39-203ENST00000475323 CLTCL1P53675 1640 aa17.41■□□□□ 0.38
ARHGEF39-203ENST00000475323 NPC1L1Q9UHC9 1359 aa17.41■□□□□ 0.38
ARHGEF39-203ENST00000475323 CGNL1Q0VF96 1302 aa17.41■□□□□ 0.38
ARHGEF39-203ENST00000475323 EFCAB2Q5VUJ9 269 aa17.41■□□□□ 0.38
ARHGEF39-203ENST00000475323 SCAPERQ9BY12 1400 aa17.4■□□□□ 0.38
ARHGEF39-203ENST00000475323 PDE3AQ14432 1141 aa17.4■□□□□ 0.38
ARHGEF39-203ENST00000475323 RLBP1P12271 317 aa17.4■□□□□ 0.38
ARHGEF39-203ENST00000475323 ADGRF5Q8IZF2 1346 aa17.39■□□□□ 0.38
ARHGEF39-203ENST00000475323 SPAG9O60271 1321 aaKnown RBP17.39■□□□□ 0.37
ARHGEF39-203ENST00000475323 PCDHB15Q9Y5E8 787 aa17.39■□□□□ 0.37
ARHGEF39-203ENST00000475323 TRPM2O94759 1503 aa17.38■□□□□ 0.37
ARHGEF39-203ENST00000475323 ERVK-7P63135 1459 aa17.38■□□□□ 0.37
ARHGEF39-203ENST00000475323 PLCH2O75038 1416 aa17.38■□□□□ 0.37
ARHGEF39-203ENST00000475323 KDM5AP29375 1690 aaKnown RBP17.38■□□□□ 0.37
ARHGEF39-203ENST00000475323 VIRMAQ69YN4 1812 aaKnown RBP17.38■□□□□ 0.37
ARHGEF39-203ENST00000475323 PKNOX2Q96KN3 472 aa17.37■□□□□ 0.37
ARHGEF39-203ENST00000475323 CEP152O94986 1710 aa17.37■□□□□ 0.37
ARHGEF39-203ENST00000475323 UGGT1Q9NYU2 1555 aa17.36■□□□□ 0.37
ARHGEF39-203ENST00000475323 RARSP54136 660 aaKnown RBP17.36■□□□□ 0.37
ARHGEF39-203ENST00000475323 PTPRTO14522 1441 aa17.36■□□□□ 0.37
ARHGEF39-203ENST00000475323 MAPK8IP3Q9UPT6 1336 aa17.36■□□□□ 0.37
ARHGEF39-203ENST00000475323 NLRP1Q9C000 1473 aa17.35■□□□□ 0.37
ARHGEF39-203ENST00000475323 SPRYD3Q8NCJ5 442 aa17.35■□□□□ 0.37
ARHGEF39-203ENST00000475323 TCP11L2Q8N4U5 519 aa17.34■□□□□ 0.37
ARHGEF39-203ENST00000475323 ARXQ96QS3 562 aa17.34■□□□□ 0.37
ARHGEF39-203ENST00000475323 PDZRN3Q9UPQ7 1066 aa17.34■□□□□ 0.37
ARHGEF39-203ENST00000475323 ABCC1P33527 1531 aa17.33■□□□□ 0.37
ARHGEF39-203ENST00000475323 KIF3BO15066 747 aa17.33■□□□□ 0.36
ARHGEF39-203ENST00000475323 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.36
ARHGEF39-203ENST00000475323 BECN1Q14457 450 aa17.32■□□□□ 0.36
ARHGEF39-203ENST00000475323 MORC1Q86VD1 984 aa17.32■□□□□ 0.36
ARHGEF39-203ENST00000475323 ANTXR1Q9H6X2 564 aa17.31■□□□□ 0.36
ARHGEF39-203ENST00000475323 TBC1D2Q9BYX2 928 aa17.3■□□□□ 0.36
ARHGEF39-203ENST00000475323 POLR3AO14802 1390 aaPredicted RBP17.3■□□□□ 0.36
ARHGEF39-203ENST00000475323 STAC3Q96MF2 364 aa17.3■□□□□ 0.36
ARHGEF39-203ENST00000475323 TRAK1Q9UPV9 953 aa17.3■□□□□ 0.36
ARHGEF39-203ENST00000475323 NSD3Q9BZ95 1437 aa17.29■□□□□ 0.36
ARHGEF39-203ENST00000475323 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
ARHGEF39-203ENST00000475323 ABCA6Q8N139 1617 aa17.29■□□□□ 0.36
ARHGEF39-203ENST00000475323 TBC1D32Q96NH3 1257 aa17.29■□□□□ 0.36
ARHGEF39-203ENST00000475323 PMFBP1Q8TBY8 1022 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms