RNA–Protein interactions for RNA: ENST00000475307.1

GPM6B-208, Transcript of glycoprotein M6B, humanhuman

TSL 3

Gene GPM6B, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPM6B-208ENST00000475307 RIMS2Q9UQ26 1411 aa17.27■□□□□ 0.35
GPM6B-208ENST00000475307 TMEM131LA2VDJ0 1609 aa17.26■□□□□ 0.35
GPM6B-208ENST00000475307 STRCP1A6NGW2 1772 aa17.25■□□□□ 0.35
GPM6B-208ENST00000475307 HFM1A2PYH4 1435 aa17.25■□□□□ 0.35
GPM6B-208ENST00000475307 ZFYVE9O95405 1425 aa17.25■□□□□ 0.35
GPM6B-208ENST00000475307 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.25■□□□□ 0.35
GPM6B-208ENST00000475307 KCNA6P17658 529 aa17.23■□□□□ 0.35
GPM6B-208ENST00000475307 NUTM2DQ5VT03 806 aaPredicted RBP17.23■□□□□ 0.35
GPM6B-208ENST00000475307 PLEKHG1Q9ULL1 1385 aa17.23■□□□□ 0.35
GPM6B-208ENST00000475307 MYO5BQ9ULV0 1848 aa17.2■□□□□ 0.34
GPM6B-208ENST00000475307 ZNF326Q5BKZ1 582 aaKnown RBP17.19■□□□□ 0.34
GPM6B-208ENST00000475307 PROSER2Q86WR7 435 aaPredicted RBP17.19■□□□□ 0.34
GPM6B-208ENST00000475307 SLC4A1APQ9BWU0 796 aaKnown RBP17.19■□□□□ 0.34
GPM6B-208ENST00000475307 HSPA1LP34931 641 aa17.18■□□□□ 0.34
GPM6B-208ENST00000475307 SPHKAPQ2M3C7 1700 aa17.18■□□□□ 0.34
GPM6B-208ENST00000475307 TMEM94Q12767 1356 aa17.17■□□□□ 0.34
GPM6B-208ENST00000475307 TBX22Q9Y458 520 aa17.17■□□□□ 0.34
GPM6B-208ENST00000475307 DISP3Q9P2K9 1392 aa17.16■□□□□ 0.34
GPM6B-208ENST00000475307 RBM33Q96EV2 1170 aaKnown RBP17.16■□□□□ 0.34
GPM6B-208ENST00000475307 ALKQ9UM73 1620 aa17.15■□□□□ 0.34
GPM6B-208ENST00000475307 TRPM2O94759 1503 aa17.15■□□□□ 0.34
GPM6B-208ENST00000475307 NKTRP30414 1462 aaKnown RBP17.14■□□□□ 0.33
GPM6B-208ENST00000475307 NWD1Q149M9 1564 aa17.14■□□□□ 0.33
GPM6B-208ENST00000475307 ADAMTS13Q76LX8 1427 aa17.13■□□□□ 0.33
GPM6B-208ENST00000475307 CLTCL1P53675 1640 aa17.12■□□□□ 0.33
GPM6B-208ENST00000475307 DIP2AQ14689 1571 aa17.1■□□□□ 0.33
GPM6B-208ENST00000475307 XIRP1Q702N8 1843 aaKnown RBP17.1■□□□□ 0.33
GPM6B-208ENST00000475307 FOXD1Q16676 465 aa17.09■□□□□ 0.33
GPM6B-208ENST00000475307 MSH6P52701 1360 aa17.09■□□□□ 0.33
GPM6B-208ENST00000475307 PIK3R4Q99570 1358 aa17.09■□□□□ 0.33
GPM6B-208ENST00000475307 C14orf37Q86TY3 774 aa17.08■□□□□ 0.32
GPM6B-208ENST00000475307 MPHOSPH9Q99550 1183 aa17.08■□□□□ 0.32
GPM6B-208ENST00000475307 AMOTL2Q9Y2J4 779 aa17.07■□□□□ 0.32
GPM6B-208ENST00000475307 CHD2O14647 1828 aaKnown RBP17.07■□□□□ 0.32
GPM6B-208ENST00000475307 SETD5Q9C0A6 1442 aa17.06■□□□□ 0.32
GPM6B-208ENST00000475307 ACIN1Q9UKV3 1341 aaKnown RBP17.06■□□□□ 0.32
GPM6B-208ENST00000475307 NEXMIFQ5QGS0 1516 aa17.06■□□□□ 0.32
GPM6B-208ENST00000475307 FAM135BQ49AJ0 1406 aa17.04■□□□□ 0.32
GPM6B-208ENST00000475307 SETBP1Q9Y6X0 1596 aa17.04■□□□□ 0.32
GPM6B-208ENST00000475307 VGFO15240 615 aaPredicted RBP17.04■□□□□ 0.32
GPM6B-208ENST00000475307 KIF1BO60333 1816 aa17.04■□□□□ 0.32
GPM6B-208ENST00000475307 PTPRUQ92729 1446 aa17.04■□□□□ 0.32
GPM6B-208ENST00000475307 RPGRIP1LQ68CZ1 1315 aa17.03■□□□□ 0.32
GPM6B-208ENST00000475307 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
GPM6B-208ENST00000475307 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
GPM6B-208ENST00000475307 NRXN3Q9Y4C0 1643 aa17.02■□□□□ 0.31
GPM6B-208ENST00000475307 SLAIN2Q9P270 581 aa17.01■□□□□ 0.31
GPM6B-208ENST00000475307 METP08581 1390 aa17.01■□□□□ 0.31
GPM6B-208ENST00000475307 ILDR2Q71H61 639 aa17■□□□□ 0.31
GPM6B-208ENST00000475307 C19orf44Q9H6X5 657 aa17■□□□□ 0.31
GPM6B-208ENST00000475307 RAB3GAP2Q9H2M9 1393 aa17■□□□□ 0.31
GPM6B-208ENST00000475307 ATF3P18847 181 aa16.99■□□□□ 0.31
GPM6B-208ENST00000475307 RGL3Q3MIN7 710 aa16.99■□□□□ 0.31
GPM6B-208ENST00000475307 CADPS2Q86UW7 1296 aa16.98■□□□□ 0.31
GPM6B-208ENST00000475307 MED1Q15648 1581 aaPredicted RBP16.97■□□□□ 0.31
GPM6B-208ENST00000475307 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
GPM6B-208ENST00000475307 XRN1Q8IZH2 1706 aaKnown RBP16.96■□□□□ 0.3
GPM6B-208ENST00000475307 PHF23Q9BUL5 403 aaPredicted RBP16.95■□□□□ 0.3
GPM6B-208ENST00000475307 SPATA31E1Q6ZUB1 1445 aa16.94■□□□□ 0.3
GPM6B-208ENST00000475307 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.93■□□□□ 0.3
GPM6B-208ENST00000475307 ADGRF5Q8IZF2 1346 aa16.92■□□□□ 0.3
GPM6B-208ENST00000475307 PPLO60437 1756 aa16.92■□□□□ 0.3
GPM6B-208ENST00000475307 ANKRD30BQ9BXX2 1392 aa16.91■□□□□ 0.3
GPM6B-208ENST00000475307 DCCP43146 1447 aa16.89■□□□□ 0.29
GPM6B-208ENST00000475307 ADGRL3Q9HAR2 1447 aa16.88■□□□□ 0.29
GPM6B-208ENST00000475307 HRCP23327 699 aa16.88■□□□□ 0.29
GPM6B-208ENST00000475307 ROBO2Q9HCK4 1378 aa16.88■□□□□ 0.29
GPM6B-208ENST00000475307 PTCH1Q13635 1447 aa16.87■□□□□ 0.29
GPM6B-208ENST00000475307 BRINP3Q76B58 766 aa16.87■□□□□ 0.29
GPM6B-208ENST00000475307 SETD1AO15047 1707 aaKnown RBP16.87■□□□□ 0.29
GPM6B-208ENST00000475307 PHLPP1O60346 1717 aa16.86■□□□□ 0.29
GPM6B-208ENST00000475307 MST1RQ04912 1400 aa16.86■□□□□ 0.29
GPM6B-208ENST00000475307 SOCS7O14512 581 aa16.85■□□□□ 0.29
GPM6B-208ENST00000475307 STK26Q9P289 416 aa16.85■□□□□ 0.29
GPM6B-208ENST00000475307 JCADQ9P266 1359 aa16.85■□□□□ 0.29
GPM6B-208ENST00000475307 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
GPM6B-208ENST00000475307 TMEM132EQ6IEE7 984 aa16.83■□□□□ 0.28
GPM6B-208ENST00000475307 PRAG1Q86YV5 1406 aa16.83■□□□□ 0.28
GPM6B-208ENST00000475307 IFT172Q9UG01 1749 aa16.83■□□□□ 0.28
GPM6B-208ENST00000475307 NALCNQ8IZF0 1738 aa16.82■□□□□ 0.28
GPM6B-208ENST00000475307 COL16A1Q07092 1604 aaPredicted RBP16.81■□□□□ 0.28
GPM6B-208ENST00000475307 AHDC1Q5TGY3 1603 aaPredicted RBP16.81■□□□□ 0.28
GPM6B-208ENST00000475307 LRPPRCP42704 1394 aaKnown RBP16.81■□□□□ 0.28
GPM6B-208ENST00000475307 ASXL1Q8IXJ9 1541 aa16.8■□□□□ 0.28
GPM6B-208ENST00000475307 C14orf93Q9H972 538 aaKnown RBP16.8■□□□□ 0.28
GPM6B-208ENST00000475307 CFAP70Q5T0N1 1121 aa16.79■□□□□ 0.28
GPM6B-208ENST00000475307 MYOM2P54296 1465 aa16.79■□□□□ 0.28
GPM6B-208ENST00000475307 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
GPM6B-208ENST00000475307 WAPLQ7Z5K2 1190 aa16.78■□□□□ 0.28
GPM6B-208ENST00000475307 C1orf167Q5SNV9 1468 aa16.78■□□□□ 0.28
GPM6B-208ENST00000475307 TECPR2O15040 1411 aa16.78■□□□□ 0.28
GPM6B-208ENST00000475307 SPATA31A6Q5VVP1 1343 aa16.77■□□□□ 0.28
GPM6B-208ENST00000475307 RGS17Q9UGC6 210 aaPredicted RBP16.77■□□□□ 0.28
GPM6B-208ENST00000475307 KDM2AQ9Y2K7 1162 aa16.77■□□□□ 0.28
GPM6B-208ENST00000475307 NRXN1Q9ULB1 1477 aa16.77■□□□□ 0.28
GPM6B-208ENST00000475307 YTHDC2Q9H6S0 1430 aaKnown RBP16.77■□□□□ 0.27
GPM6B-208ENST00000475307 DCAF11Q8TEB1 546 aa16.76■□□□□ 0.27
GPM6B-208ENST00000475307 DDX17Q92841 729 aaKnown RBP16.76■□□□□ 0.27
GPM6B-208ENST00000475307 DHX57Q6P158 1386 aaKnown RBP16.76■□□□□ 0.27
GPM6B-208ENST00000475307 MEX3CQ5U5Q3 659 aaKnown RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms