RNA–Protein interactions for RNA: ENST00000475288.5

PCGF3-209, Transcript of polycomb group ring finger 3, humanhuman

TSL 3

Gene PCGF3, Length 604 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-209ENST00000475288 FAM50AQ14320 339 aaKnown RBP27.66■■■□□ 2.02
PCGF3-209ENST00000475288 SENP3Q9H4L4 574 aaPredicted RBP27.66■■■□□ 2.02
PCGF3-209ENST00000475288 PLEKHG1Q9ULL1 1385 aa27.65■■■□□ 2.02
PCGF3-209ENST00000475288 PROSER2Q86WR7 435 aaPredicted RBP27.65■■■□□ 2.02
PCGF3-209ENST00000475288 TMEM131LA2VDJ0 1609 aa27.65■■■□□ 2.02
PCGF3-209ENST00000475288 ROBO1Q9Y6N7 1651 aa27.65■■■□□ 2.02
PCGF3-209ENST00000475288 MYO5BQ9ULV0 1848 aa27.62■■■□□ 2.01
PCGF3-209ENST00000475288 HDGFP51858 240 aaKnown RBP27.62■■■□□ 2.01
PCGF3-209ENST00000475288 CHD2O14647 1828 aaKnown RBP27.62■■■□□ 2.01
PCGF3-209ENST00000475288 RIMS2Q9UQ26 1411 aa27.6■■■□□ 2.01
PCGF3-209ENST00000475288 RGS17Q9UGC6 210 aaPredicted RBP27.6■■■□□ 2.01
PCGF3-209ENST00000475288 MSH6P52701 1360 aa27.6■■■□□ 2.01
PCGF3-209ENST00000475288 ROCK1Q13464 1354 aa27.6■■■□□ 2.01
PCGF3-209ENST00000475288 NCOA3Q9Y6Q9 1424 aa27.57■■■□□ 2
PCGF3-209ENST00000475288 IQGAP3Q86VI3 1631 aa27.56■■■□□ 2
PCGF3-209ENST00000475288 E9PCH4 1651 aa27.56■■■□□ 2
PCGF3-209ENST00000475288 DIP2AQ14689 1571 aa27.54■■■□□ 2
PCGF3-209ENST00000475288 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.54■■■□□ 2
PCGF3-209ENST00000475288 BCANQ96GW7 911 aa27.54■■■□□ 2
PCGF3-209ENST00000475288 TBX22Q9Y458 520 aa27.54■■■□□ 2
PCGF3-209ENST00000475288 PPP1R15AO75807 674 aaPredicted RBP27.52■■■□□ 2
PCGF3-209ENST00000475288 RBM33Q96EV2 1170 aaKnown RBP27.52■■■□□ 2
PCGF3-209ENST00000475288 SLAIN2Q9P270 581 aa27.51■■□□□ 1.99
PCGF3-209ENST00000475288 PIK3R4Q99570 1358 aa27.5■■□□□ 1.99
PCGF3-209ENST00000475288 ADAMTS13Q76LX8 1427 aa27.49■■□□□ 1.99
PCGF3-209ENST00000475288 PHLPP1O60346 1717 aa27.48■■□□□ 1.99
PCGF3-209ENST00000475288 JCADQ9P266 1359 aa27.44■■□□□ 1.98
PCGF3-209ENST00000475288 COL16A1Q07092 1604 aaPredicted RBP27.43■■□□□ 1.98
PCGF3-209ENST00000475288 TRPM2O94759 1503 aa27.41■■□□□ 1.98
PCGF3-209ENST00000475288 NUP155O75694 1391 aa27.4■■□□□ 1.98
PCGF3-209ENST00000475288 CHGAP10645 457 aaKnown RBP27.4■■□□□ 1.98
PCGF3-209ENST00000475288 POTEAQ6S8J7 498 aa27.4■■□□□ 1.98
PCGF3-209ENST00000475288 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.39■■□□□ 1.98
PCGF3-209ENST00000475288 AHDC1Q5TGY3 1603 aaPredicted RBP27.38■■□□□ 1.97
PCGF3-209ENST00000475288 CADPS2Q86UW7 1296 aa27.37■■□□□ 1.97
PCGF3-209ENST00000475288 C19orf44Q9H6X5 657 aa27.37■■□□□ 1.97
PCGF3-209ENST00000475288 SETBP1Q9Y6X0 1596 aa27.34■■□□□ 1.97
PCGF3-209ENST00000475288 SPHKAPQ2M3C7 1700 aa27.33■■□□□ 1.97
PCGF3-209ENST00000475288 SPATA31A6Q5VVP1 1343 aa27.33■■□□□ 1.97
PCGF3-209ENST00000475288 DCCP43146 1447 aa27.33■■□□□ 1.96
PCGF3-209ENST00000475288 NUTM2DQ5VT03 806 aaPredicted RBP27.32■■□□□ 1.96
PCGF3-209ENST00000475288 C14orf37Q86TY3 774 aa27.32■■□□□ 1.96
PCGF3-209ENST00000475288 NRXN3Q9Y4C0 1643 aa27.31■■□□□ 1.96
PCGF3-209ENST00000475288 SHPRHQ149N8 1683 aa27.31■■□□□ 1.96
PCGF3-209ENST00000475288 XRN1Q8IZH2 1706 aaKnown RBP27.31■■□□□ 1.96
PCGF3-209ENST00000475288 ATF3P18847 181 aa27.31■■□□□ 1.96
PCGF3-209ENST00000475288 PTPRUQ92729 1446 aa27.31■■□□□ 1.96
PCGF3-209ENST00000475288 AMOTL2Q9Y2J4 779 aa27.29■■□□□ 1.96
PCGF3-209ENST00000475288 LRP6O75581 1613 aa27.26■■□□□ 1.95
PCGF3-209ENST00000475288 ITGAEP38570 1179 aa27.23■■□□□ 1.95
PCGF3-209ENST00000475288 BRINP3Q76B58 766 aa27.21■■□□□ 1.95
PCGF3-209ENST00000475288 NEXMIFQ5QGS0 1516 aa27.19■■□□□ 1.94
PCGF3-209ENST00000475288 ASXL1Q8IXJ9 1541 aa27.19■■□□□ 1.94
PCGF3-209ENST00000475288 SETD1AO15047 1707 aaKnown RBP27.19■■□□□ 1.94
PCGF3-209ENST00000475288 ZNF772Q68DY9 489 aaPredicted RBP27.18■■□□□ 1.94
PCGF3-209ENST00000475288 CLTCL1P53675 1640 aa27.18■■□□□ 1.94
PCGF3-209ENST00000475288 NHSL1Q5SYE7 1610 aa27.18■■□□□ 1.94
PCGF3-209ENST00000475288 MST1RQ04912 1400 aa27.17■■□□□ 1.94
PCGF3-209ENST00000475288 SETD5Q9C0A6 1442 aa27.16■■□□□ 1.94
PCGF3-209ENST00000475288 METP08581 1390 aa27.16■■□□□ 1.94
PCGF3-209ENST00000475288 RRBP1Q9P2E9 1410 aaKnown RBP27.16■■□□□ 1.94
PCGF3-209ENST00000475288 ZNF326Q5BKZ1 582 aaKnown RBP27.15■■□□□ 1.94
PCGF3-209ENST00000475288 MEX3CQ5U5Q3 659 aaKnown RBP27.14■■□□□ 1.94
PCGF3-209ENST00000475288 ADGRL3Q9HAR2 1447 aa27.14■■□□□ 1.93
PCGF3-209ENST00000475288 KIF1BO60333 1816 aa27.13■■□□□ 1.93
PCGF3-209ENST00000475288 NAIPQ13075 1403 aa27.12■■□□□ 1.93
PCGF3-209ENST00000475288 NALCNQ8IZF0 1738 aa27.1■■□□□ 1.93
PCGF3-209ENST00000475288 CDK12Q9NYV4 1490 aaPredicted RBP27.08■■□□□ 1.93
PCGF3-209ENST00000475288 PRAG1Q86YV5 1406 aa27.07■■□□□ 1.92
PCGF3-209ENST00000475288 PTCH1Q13635 1447 aa27.07■■□□□ 1.92
PCGF3-209ENST00000475288 PPARGC1BQ86YN6 1023 aaKnown RBP27.06■■□□□ 1.92
PCGF3-209ENST00000475288 LRRC59Q96AG4 307 aaKnown RBP27.06■■□□□ 1.92
PCGF3-209ENST00000475288 LAMC1P11047 1609 aa27.05■■□□□ 1.92
PCGF3-209ENST00000475288 VGFO15240 615 aaPredicted RBP27.02■■□□□ 1.92
PCGF3-209ENST00000475288 HFM1A2PYH4 1435 aa27.01■■□□□ 1.91
PCGF3-209ENST00000475288 RPGRIP1LQ68CZ1 1315 aa27■■□□□ 1.91
PCGF3-209ENST00000475288 RXRBP28702 533 aa27■■□□□ 1.91
PCGF3-209ENST00000475288 C1orf167Q5SNV9 1468 aa27■■□□□ 1.91
PCGF3-209ENST00000475288 PNPLA6Q8IY17 1366 aa26.99■■□□□ 1.91
PCGF3-209ENST00000475288 NUTM2BA6NNL0 878 aaPredicted RBP26.99■■□□□ 1.91
PCGF3-209ENST00000475288 NUTM2EB1AL46 878 aaPredicted RBP26.99■■□□□ 1.91
PCGF3-209ENST00000475288 NUTM2AQ8IVF1 878 aaPredicted RBP26.99■■□□□ 1.91
PCGF3-209ENST00000475288 UPF1Q92900 1129 aaKnown RBP eCLIP26.98■■□□□ 1.91
PCGF3-209ENST00000475288 AFF2P51816 1311 aa26.97■■□□□ 1.91
PCGF3-209ENST00000475288 TRIM52Q96A61 297 aa26.97■■□□□ 1.91
PCGF3-209ENST00000475288 PPLO60437 1756 aa26.95■■□□□ 1.9
PCGF3-209ENST00000475288 ROBO2Q9HCK4 1378 aa26.95■■□□□ 1.9
PCGF3-209ENST00000475288 SOS2Q07890 1332 aaPredicted RBP26.91■■□□□ 1.9
PCGF3-209ENST00000475288 DDX17Q92841 729 aaKnown RBP26.91■■□□□ 1.9
PCGF3-209ENST00000475288 SLC4A1APQ9BWU0 796 aaKnown RBP26.9■■□□□ 1.9
PCGF3-209ENST00000475288 RBM6P78332 1123 aaKnown RBP26.87■■□□□ 1.89
PCGF3-209ENST00000475288 C8orf37Q96NL8 207 aa26.87■■□□□ 1.89
PCGF3-209ENST00000475288 CDC42BPGQ6DT37 1551 aa26.86■■□□□ 1.89
PCGF3-209ENST00000475288 COL22A1Q8NFW1 1626 aaPredicted RBP26.85■■□□□ 1.89
PCGF3-209ENST00000475288 RGS12O14924 1447 aa26.84■■□□□ 1.89
PCGF3-209ENST00000475288 ORAI2Q96SN7 254 aa26.84■■□□□ 1.89
PCGF3-209ENST00000475288 QTRT2Q9H974 415 aaKnown RBP26.84■■□□□ 1.89
PCGF3-209ENST00000475288 TECPR2O15040 1411 aa26.81■■□□□ 1.88
PCGF3-209ENST00000475288 NGLY1Q96IV0 654 aa26.8■■□□□ 1.88
PCGF3-209ENST00000475288 IFT172Q9UG01 1749 aa26.79■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms