RNA–Protein interactions for RNA: ENST00000475235.1

HLA-DOB-208, Transcript of major histocompatibility complex, class II, DO beta, humanhuman

Gene HLA-DOB, Length 1,514 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOB-208ENST00000475235 CFAP65Q6ZU64 1925 aaKnown RBP17.3■□□□□ 0.36
HLA-DOB-208ENST00000475235 HFM1A2PYH4 1435 aa17.3■□□□□ 0.36
HLA-DOB-208ENST00000475235 HDGFP51858 240 aaKnown RBP17.28■□□□□ 0.36
HLA-DOB-208ENST00000475235 E9PCH4 1651 aa17.27■□□□□ 0.35
HLA-DOB-208ENST00000475235 UBAP1LF5GYI3 381 aa17.25■□□□□ 0.35
HLA-DOB-208ENST00000475235 CHGAP10645 457 aaKnown RBP17.24■□□□□ 0.35
HLA-DOB-208ENST00000475235 MAPK8IP2Q13387 824 aaPredicted RBP17.23■□□□□ 0.35
HLA-DOB-208ENST00000475235 PPP1R15AO75807 674 aaPredicted RBP17.22■□□□□ 0.35
HLA-DOB-208ENST00000475235 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.22■□□□□ 0.35
HLA-DOB-208ENST00000475235 TRIM52Q96A61 297 aa17.22■□□□□ 0.35
HLA-DOB-208ENST00000475235 ZFYVE9O95405 1425 aa17.22■□□□□ 0.35
HLA-DOB-208ENST00000475235 RIMS2Q9UQ26 1411 aa17.22■□□□□ 0.35
HLA-DOB-208ENST00000475235 TMEM131LA2VDJ0 1609 aa17.21■□□□□ 0.35
HLA-DOB-208ENST00000475235 TOM1O60784 492 aa17.21■□□□□ 0.34
HLA-DOB-208ENST00000475235 BCANQ96GW7 911 aa17.2■□□□□ 0.34
HLA-DOB-208ENST00000475235 PLEKHG1Q9ULL1 1385 aa17.2■□□□□ 0.34
HLA-DOB-208ENST00000475235 LRRC7Q96NW7 1537 aa17.18■□□□□ 0.34
HLA-DOB-208ENST00000475235 SLC26A8Q96RN1 970 aa17.18■□□□□ 0.34
HLA-DOB-208ENST00000475235 ACIN1Q9UKV3 1341 aaKnown RBP17.18■□□□□ 0.34
HLA-DOB-208ENST00000475235 SLC4A1APQ9BWU0 796 aaKnown RBP17.17■□□□□ 0.34
HLA-DOB-208ENST00000475235 KCNA6P17658 529 aa17.16■□□□□ 0.34
HLA-DOB-208ENST00000475235 TRPM2O94759 1503 aa17.15■□□□□ 0.34
HLA-DOB-208ENST00000475235 SPHKAPQ2M3C7 1700 aa17.14■□□□□ 0.33
HLA-DOB-208ENST00000475235 TBX22Q9Y458 520 aa17.13■□□□□ 0.33
HLA-DOB-208ENST00000475235 ZNF326Q5BKZ1 582 aaKnown RBP17.12■□□□□ 0.33
HLA-DOB-208ENST00000475235 STRCP1A6NGW2 1772 aa17.12■□□□□ 0.33
HLA-DOB-208ENST00000475235 PIP4K2BP78356 416 aa17.11■□□□□ 0.33
HLA-DOB-208ENST00000475235 NKTRP30414 1462 aaKnown RBP17.11■□□□□ 0.33
HLA-DOB-208ENST00000475235 NUTM2DQ5VT03 806 aaPredicted RBP17.11■□□□□ 0.33
HLA-DOB-208ENST00000475235 DIP2AQ14689 1571 aa17.09■□□□□ 0.33
HLA-DOB-208ENST00000475235 NWD1Q149M9 1564 aa17.09■□□□□ 0.33
HLA-DOB-208ENST00000475235 PROSER2Q86WR7 435 aaPredicted RBP17.09■□□□□ 0.33
HLA-DOB-208ENST00000475235 TMEM94Q12767 1356 aa17.09■□□□□ 0.33
HLA-DOB-208ENST00000475235 PIK3R4Q99570 1358 aa17.09■□□□□ 0.33
HLA-DOB-208ENST00000475235 ADAMTS13Q76LX8 1427 aa17.09■□□□□ 0.33
HLA-DOB-208ENST00000475235 SETD5Q9C0A6 1442 aa17.09■□□□□ 0.33
HLA-DOB-208ENST00000475235 MYO5BQ9ULV0 1848 aa17.08■□□□□ 0.33
HLA-DOB-208ENST00000475235 CLTCL1P53675 1640 aa17.08■□□□□ 0.33
HLA-DOB-208ENST00000475235 MPHOSPH9Q99550 1183 aa17.07■□□□□ 0.32
HLA-DOB-208ENST00000475235 ALKQ9UM73 1620 aa17.04■□□□□ 0.32
HLA-DOB-208ENST00000475235 RPGRIP1LQ68CZ1 1315 aa17.04■□□□□ 0.32
HLA-DOB-208ENST00000475235 SETBP1Q9Y6X0 1596 aa17.03■□□□□ 0.32
HLA-DOB-208ENST00000475235 NEXMIFQ5QGS0 1516 aa17.03■□□□□ 0.32
HLA-DOB-208ENST00000475235 CCDC144AA2RUR9 1427 aa17.03■□□□□ 0.32
HLA-DOB-208ENST00000475235 NCOA3Q9Y6Q9 1424 aa17.03■□□□□ 0.32
HLA-DOB-208ENST00000475235 VGFO15240 615 aaPredicted RBP17.02■□□□□ 0.32
HLA-DOB-208ENST00000475235 HSPA1LP34931 641 aa17.02■□□□□ 0.32
HLA-DOB-208ENST00000475235 MSH6P52701 1360 aa17.02■□□□□ 0.31
HLA-DOB-208ENST00000475235 RAB3GAP2Q9H2M9 1393 aa17.02■□□□□ 0.31
HLA-DOB-208ENST00000475235 RBM33Q96EV2 1170 aaKnown RBP17.01■□□□□ 0.31
HLA-DOB-208ENST00000475235 CNKSR2Q8WXI2 1034 aa17■□□□□ 0.31
HLA-DOB-208ENST00000475235 AMOTL2Q9Y2J4 779 aa17■□□□□ 0.31
HLA-DOB-208ENST00000475235 KIF1BO60333 1816 aa16.99■□□□□ 0.31
HLA-DOB-208ENST00000475235 CHD2O14647 1828 aaKnown RBP16.98■□□□□ 0.31
HLA-DOB-208ENST00000475235 FAM135BQ49AJ0 1406 aa16.97■□□□□ 0.31
HLA-DOB-208ENST00000475235 HRCP23327 699 aa16.97■□□□□ 0.31
HLA-DOB-208ENST00000475235 NCBP3Q53F19 620 aaKnown RBP16.97■□□□□ 0.31
HLA-DOB-208ENST00000475235 C14orf37Q86TY3 774 aa16.97■□□□□ 0.31
HLA-DOB-208ENST00000475235 NRXN3Q9Y4C0 1643 aa16.97■□□□□ 0.31
HLA-DOB-208ENST00000475235 XIRP1Q702N8 1843 aaKnown RBP16.97■□□□□ 0.31
HLA-DOB-208ENST00000475235 DISP3Q9P2K9 1392 aa16.96■□□□□ 0.31
HLA-DOB-208ENST00000475235 PTPRUQ92729 1446 aa16.96■□□□□ 0.31
HLA-DOB-208ENST00000475235 METP08581 1390 aa16.96■□□□□ 0.3
HLA-DOB-208ENST00000475235 C19orf44Q9H6X5 657 aa16.94■□□□□ 0.3
HLA-DOB-208ENST00000475235 SPATA31E1Q6ZUB1 1445 aa16.94■□□□□ 0.3
HLA-DOB-208ENST00000475235 ANKRD30BQ9BXX2 1392 aa16.93■□□□□ 0.3
HLA-DOB-208ENST00000475235 KCNA4P22459 653 aa16.93■□□□□ 0.3
HLA-DOB-208ENST00000475235 CADPS2Q86UW7 1296 aa16.93■□□□□ 0.3
HLA-DOB-208ENST00000475235 RGL3Q3MIN7 710 aa16.92■□□□□ 0.3
HLA-DOB-208ENST00000475235 SLAIN2Q9P270 581 aa16.92■□□□□ 0.3
HLA-DOB-208ENST00000475235 ATF3P18847 181 aa16.91■□□□□ 0.3
HLA-DOB-208ENST00000475235 XRN1Q8IZH2 1706 aaKnown RBP16.91■□□□□ 0.3
HLA-DOB-208ENST00000475235 POTEDQ86YR6 584 aa16.9■□□□□ 0.3
HLA-DOB-208ENST00000475235 DCCP43146 1447 aa16.89■□□□□ 0.29
HLA-DOB-208ENST00000475235 PTCH1Q13635 1447 aa16.88■□□□□ 0.29
HLA-DOB-208ENST00000475235 ADGRF5Q8IZF2 1346 aa16.87■□□□□ 0.29
HLA-DOB-208ENST00000475235 PPLO60437 1756 aa16.87■□□□□ 0.29
HLA-DOB-208ENST00000475235 PRAG1Q86YV5 1406 aa16.87■□□□□ 0.29
HLA-DOB-208ENST00000475235 ROBO1Q9Y6N7 1651 aa16.86■□□□□ 0.29
HLA-DOB-208ENST00000475235 ADGRL3Q9HAR2 1447 aa16.85■□□□□ 0.29
HLA-DOB-208ENST00000475235 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.83■□□□□ 0.29
HLA-DOB-208ENST00000475235 PIK3C2GO75747 1445 aa16.83■□□□□ 0.28
HLA-DOB-208ENST00000475235 MED1Q15648 1581 aaPredicted RBP16.83■□□□□ 0.28
HLA-DOB-208ENST00000475235 SETD1AO15047 1707 aaKnown RBP16.82■□□□□ 0.28
HLA-DOB-208ENST00000475235 ROBO2Q9HCK4 1378 aa16.82■□□□□ 0.28
HLA-DOB-208ENST00000475235 MYOM2P54296 1465 aa16.81■□□□□ 0.28
HLA-DOB-208ENST00000475235 IFT172Q9UG01 1749 aa16.8■□□□□ 0.28
HLA-DOB-208ENST00000475235 MST1RQ04912 1400 aa16.79■□□□□ 0.28
HLA-DOB-208ENST00000475235 NRXN1Q9ULB1 1477 aa16.79■□□□□ 0.28
HLA-DOB-208ENST00000475235 LRPPRCP42704 1394 aaKnown RBP16.78■□□□□ 0.28
HLA-DOB-208ENST00000475235 BRINP3Q76B58 766 aa16.78■□□□□ 0.28
HLA-DOB-208ENST00000475235 STAC3Q96MF2 364 aa16.78■□□□□ 0.28
HLA-DOB-208ENST00000475235 C14orf93Q9H972 538 aaKnown RBP16.78■□□□□ 0.28
HLA-DOB-208ENST00000475235 TECPR2O15040 1411 aa16.78■□□□□ 0.28
HLA-DOB-208ENST00000475235 ABCC11Q96J66 1382 aa16.78■□□□□ 0.28
HLA-DOB-208ENST00000475235 JCADQ9P266 1359 aa16.77■□□□□ 0.27
HLA-DOB-208ENST00000475235 ILDR2Q71H61 639 aa16.76■□□□□ 0.27
HLA-DOB-208ENST00000475235 TMEM132EQ6IEE7 984 aa16.75■□□□□ 0.27
HLA-DOB-208ENST00000475235 STK26Q9P289 416 aa16.75■□□□□ 0.27
HLA-DOB-208ENST00000475235 AHDC1Q5TGY3 1603 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms