RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 GCC2Q8IWJ2 1684 aa38.46■■■■□ 3.75
TMEM54-205ENST00000475208 BCANQ96GW7 911 aa38.46■■■■□ 3.75
TMEM54-205ENST00000475208 NKTRP30414 1462 aaKnown RBP38.46■■■■□ 3.75
TMEM54-205ENST00000475208 ZFYVE9O95405 1425 aa38.45■■■■□ 3.75
TMEM54-205ENST00000475208 MYO5BQ9ULV0 1848 aa38.45■■■■□ 3.75
TMEM54-205ENST00000475208 RBM33Q96EV2 1170 aaKnown RBP38.44■■■■□ 3.74
TMEM54-205ENST00000475208 TMEM131LA2VDJ0 1609 aa38.41■■■■□ 3.74
TMEM54-205ENST00000475208 RIMS2Q9UQ26 1411 aa38.4■■■■□ 3.74
TMEM54-205ENST00000475208 PLEKHG1Q9ULL1 1385 aa38.4■■■■□ 3.74
TMEM54-205ENST00000475208 ROCK1Q13464 1354 aa38.38■■■■□ 3.73
TMEM54-205ENST00000475208 PPP1R15AO75807 674 aaPredicted RBP38.37■■■■□ 3.73
TMEM54-205ENST00000475208 ROBO1Q9Y6N7 1651 aa38.36■■■■□ 3.73
TMEM54-205ENST00000475208 E9PCH4 1651 aa38.36■■■■□ 3.73
TMEM54-205ENST00000475208 HDGFP51858 240 aaKnown RBP38.34■■■■□ 3.73
TMEM54-205ENST00000475208 MSH6P52701 1360 aa38.32■■■■□ 3.73
TMEM54-205ENST00000475208 IQGAP3Q86VI3 1631 aa38.32■■■■□ 3.73
TMEM54-205ENST00000475208 CHGAP10645 457 aaKnown RBP38.31■■■■□ 3.72
TMEM54-205ENST00000475208 CHD2O14647 1828 aaKnown RBP38.3■■■■□ 3.72
TMEM54-205ENST00000475208 ABCF1Q8NE71 845 aaKnown RBP eCLIP38.26■■■■□ 3.72
TMEM54-205ENST00000475208 RGS17Q9UGC6 210 aaPredicted RBP38.26■■■■□ 3.72
TMEM54-205ENST00000475208 TBX22Q9Y458 520 aa38.23■■■■□ 3.71
TMEM54-205ENST00000475208 NUP155O75694 1391 aa38.22■■■■□ 3.71
TMEM54-205ENST00000475208 ITGAEP38570 1179 aa38.22■■■■□ 3.71
TMEM54-205ENST00000475208 NUTM2DQ5VT03 806 aaPredicted RBP38.21■■■■□ 3.71
TMEM54-205ENST00000475208 SLAIN2Q9P270 581 aa38.2■■■■□ 3.71
TMEM54-205ENST00000475208 ADAMTS13Q76LX8 1427 aa38.2■■■■□ 3.71
TMEM54-205ENST00000475208 DIP2AQ14689 1571 aa38.18■■■■□ 3.7
TMEM54-205ENST00000475208 PHLPP1O60346 1717 aa38.14■■■■□ 3.7
TMEM54-205ENST00000475208 NCOA3Q9Y6Q9 1424 aa38.13■■■■□ 3.7
TMEM54-205ENST00000475208 PPARGC1BQ86YN6 1023 aaKnown RBP38.12■■■■□ 3.69
TMEM54-205ENST00000475208 PIK3R4Q99570 1358 aa38.11■■■■□ 3.69
TMEM54-205ENST00000475208 C14orf37Q86TY3 774 aa38.1■■■■□ 3.69
TMEM54-205ENST00000475208 TRPM2O94759 1503 aa38.07■■■■□ 3.68
TMEM54-205ENST00000475208 JCADQ9P266 1359 aa38.05■■■■□ 3.68
TMEM54-205ENST00000475208 POTEAQ6S8J7 498 aa38.04■■■■□ 3.68
TMEM54-205ENST00000475208 SPHKAPQ2M3C7 1700 aa38.04■■■■□ 3.68
TMEM54-205ENST00000475208 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.03■■■■□ 3.68
TMEM54-205ENST00000475208 COL16A1Q07092 1604 aaPredicted RBP38.02■■■■□ 3.68
TMEM54-205ENST00000475208 CADPS2Q86UW7 1296 aa38■■■■□ 3.67
TMEM54-205ENST00000475208 PTPRUQ92729 1446 aa38■■■■□ 3.67
TMEM54-205ENST00000475208 C19orf44Q9H6X5 657 aa37.99■■■■□ 3.67
TMEM54-205ENST00000475208 AMOTL2Q9Y2J4 779 aa37.98■■■■□ 3.67
TMEM54-205ENST00000475208 ATF3P18847 181 aa37.96■■■■□ 3.67
TMEM54-205ENST00000475208 NRXN3Q9Y4C0 1643 aa37.96■■■■□ 3.67
TMEM54-205ENST00000475208 SETBP1Q9Y6X0 1596 aa37.94■■■■□ 3.66
TMEM54-205ENST00000475208 AHDC1Q5TGY3 1603 aaPredicted RBP37.92■■■■□ 3.66
TMEM54-205ENST00000475208 ZNF326Q5BKZ1 582 aaKnown RBP37.91■■■■□ 3.66
TMEM54-205ENST00000475208 XRN1Q8IZH2 1706 aaKnown RBP37.91■■■■□ 3.66
TMEM54-205ENST00000475208 CLTCL1P53675 1640 aa37.87■■■■□ 3.65
TMEM54-205ENST00000475208 RRBP1Q9P2E9 1410 aaKnown RBP37.87■■■■□ 3.65
TMEM54-205ENST00000475208 LRP6O75581 1613 aa37.85■■■■□ 3.65
TMEM54-205ENST00000475208 DCCP43146 1447 aa37.85■■■■□ 3.65
TMEM54-205ENST00000475208 SPATA31A6Q5VVP1 1343 aa37.85■■■■□ 3.65
TMEM54-205ENST00000475208 METP08581 1390 aa37.82■■■■□ 3.65
TMEM54-205ENST00000475208 NAIPQ13075 1403 aa37.82■■■■□ 3.64
TMEM54-205ENST00000475208 BRINP3Q76B58 766 aa37.82■■■■□ 3.64
TMEM54-205ENST00000475208 NEXMIFQ5QGS0 1516 aa37.82■■■■□ 3.64
TMEM54-205ENST00000475208 SHPRHQ149N8 1683 aa37.81■■■■□ 3.64
TMEM54-205ENST00000475208 MEX3CQ5U5Q3 659 aaKnown RBP37.76■■■■□ 3.64
TMEM54-205ENST00000475208 ASXL1Q8IXJ9 1541 aa37.76■■■■□ 3.63
TMEM54-205ENST00000475208 SETD1AO15047 1707 aaKnown RBP37.75■■■■□ 3.63
TMEM54-205ENST00000475208 MST1RQ04912 1400 aa37.75■■■■□ 3.63
TMEM54-205ENST00000475208 KIF1BO60333 1816 aa37.73■■■■□ 3.63
TMEM54-205ENST00000475208 ADGRL3Q9HAR2 1447 aa37.7■■■■□ 3.62
TMEM54-205ENST00000475208 NHSL1Q5SYE7 1610 aa37.67■■■■□ 3.62
TMEM54-205ENST00000475208 NALCNQ8IZF0 1738 aa37.67■■■■□ 3.62
TMEM54-205ENST00000475208 ZNF772Q68DY9 489 aaPredicted RBP37.66■■■■□ 3.62
TMEM54-205ENST00000475208 TRIM52Q96A61 297 aa37.65■■■■□ 3.62
TMEM54-205ENST00000475208 HFM1A2PYH4 1435 aa37.64■■■■□ 3.62
TMEM54-205ENST00000475208 SETD5Q9C0A6 1442 aa37.64■■■■□ 3.62
TMEM54-205ENST00000475208 NUTM2BA6NNL0 878 aaPredicted RBP37.62■■■■□ 3.61
TMEM54-205ENST00000475208 NUTM2EB1AL46 878 aaPredicted RBP37.62■■■■□ 3.61
TMEM54-205ENST00000475208 NUTM2AQ8IVF1 878 aaPredicted RBP37.62■■■■□ 3.61
TMEM54-205ENST00000475208 VGFO15240 615 aaPredicted RBP37.58■■■■□ 3.61
TMEM54-205ENST00000475208 PTCH1Q13635 1447 aa37.57■■■■□ 3.6
TMEM54-205ENST00000475208 SLC4A1APQ9BWU0 796 aaKnown RBP37.56■■■■□ 3.6
TMEM54-205ENST00000475208 DDX17Q92841 729 aaKnown RBP37.54■■■■□ 3.6
TMEM54-205ENST00000475208 LRRC59Q96AG4 307 aaKnown RBP37.54■■■■□ 3.6
TMEM54-205ENST00000475208 ROBO2Q9HCK4 1378 aa37.52■■■■□ 3.6
TMEM54-205ENST00000475208 C1orf167Q5SNV9 1468 aa37.52■■■■□ 3.6
TMEM54-205ENST00000475208 RPGRIP1LQ68CZ1 1315 aa37.51■■■■□ 3.6
TMEM54-205ENST00000475208 PNPLA6Q8IY17 1366 aa37.49■■■■□ 3.59
TMEM54-205ENST00000475208 PPLO60437 1756 aa37.48■■■■□ 3.59
TMEM54-205ENST00000475208 PRAG1Q86YV5 1406 aa37.48■■■■□ 3.59
TMEM54-205ENST00000475208 AFF2P51816 1311 aa37.48■■■■□ 3.59
TMEM54-205ENST00000475208 RXRBP28702 533 aa37.47■■■■□ 3.59
TMEM54-205ENST00000475208 LAMC1P11047 1609 aa37.42■■■■□ 3.58
TMEM54-205ENST00000475208 CDK12Q9NYV4 1490 aaPredicted RBP37.4■■■■□ 3.58
TMEM54-205ENST00000475208 FOXD1Q16676 465 aa37.4■■■■□ 3.58
TMEM54-205ENST00000475208 C8orf37Q96NL8 207 aa37.4■■■■□ 3.58
TMEM54-205ENST00000475208 UPF1Q92900 1129 aaKnown RBP eCLIP37.38■■■■□ 3.57
TMEM54-205ENST00000475208 ORAI2Q96SN7 254 aa37.38■■■■□ 3.57
TMEM54-205ENST00000475208 SOS2Q07890 1332 aaPredicted RBP37.34■■■■□ 3.57
TMEM54-205ENST00000475208 CCDC144AA2RUR9 1427 aa37.33■■■■□ 3.57
TMEM54-205ENST00000475208 ADGRF5Q8IZF2 1346 aa37.3■■■■□ 3.56
TMEM54-205ENST00000475208 ADAMTS2O95450 1211 aa37.29■■■■□ 3.56
TMEM54-205ENST00000475208 CDC42BPGQ6DT37 1551 aa37.29■■■■□ 3.56
TMEM54-205ENST00000475208 QTRT2Q9H974 415 aaKnown RBP37.27■■■■□ 3.56
TMEM54-205ENST00000475208 SPATA31E1Q6ZUB1 1445 aa37.27■■■■□ 3.56
TMEM54-205ENST00000475208 RGL3Q3MIN7 710 aa37.26■■■■□ 3.56
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms