RNA–Protein interactions for RNA: ENST00000475140.5

PDZD4-204, Transcript of PDZ domain containing 4, humanhuman

TSL 5

Gene PDZD4, Length 830 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZD4-204ENST00000475140 RIMS2Q9UQ26 1411 aa28.45■■■□□ 2.15
PDZD4-204ENST00000475140 HSPA1LP34931 641 aa28.45■■■□□ 2.14
PDZD4-204ENST00000475140 TMEM131LA2VDJ0 1609 aa28.43■■■□□ 2.14
PDZD4-204ENST00000475140 KCNA6P17658 529 aa28.42■■■□□ 2.14
PDZD4-204ENST00000475140 ZFYVE9O95405 1425 aa28.42■■■□□ 2.14
PDZD4-204ENST00000475140 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.4■■■□□ 2.14
PDZD4-204ENST00000475140 PLEKHG1Q9ULL1 1385 aa28.39■■■□□ 2.14
PDZD4-204ENST00000475140 ALKQ9UM73 1620 aa28.39■■■□□ 2.13
PDZD4-204ENST00000475140 MYO5BQ9ULV0 1848 aa28.39■■■□□ 2.13
PDZD4-204ENST00000475140 NAIPQ13075 1403 aa28.37■■■□□ 2.13
PDZD4-204ENST00000475140 NUTM2DQ5VT03 806 aaPredicted RBP28.37■■■□□ 2.13
PDZD4-204ENST00000475140 PROSER2Q86WR7 435 aaPredicted RBP28.36■■■□□ 2.13
PDZD4-204ENST00000475140 TMEM94Q12767 1356 aa28.36■■■□□ 2.13
PDZD4-204ENST00000475140 RBM33Q96EV2 1170 aaKnown RBP28.32■■■□□ 2.12
PDZD4-204ENST00000475140 TRIM52Q96A61 297 aa28.31■■■□□ 2.12
PDZD4-204ENST00000475140 NKTRP30414 1462 aaKnown RBP28.3■■■□□ 2.12
PDZD4-204ENST00000475140 HFM1A2PYH4 1435 aa28.29■■■□□ 2.12
PDZD4-204ENST00000475140 ILDR2Q71H61 639 aa28.29■■■□□ 2.12
PDZD4-204ENST00000475140 XIRP1Q702N8 1843 aaKnown RBP28.29■■■□□ 2.12
PDZD4-204ENST00000475140 SPHKAPQ2M3C7 1700 aa28.29■■■□□ 2.12
PDZD4-204ENST00000475140 NWD1Q149M9 1564 aa28.28■■■□□ 2.12
PDZD4-204ENST00000475140 ZNF326Q5BKZ1 582 aaKnown RBP28.28■■■□□ 2.12
PDZD4-204ENST00000475140 TBX22Q9Y458 520 aa28.28■■■□□ 2.12
PDZD4-204ENST00000475140 ADAMTS13Q76LX8 1427 aa28.22■■■□□ 2.11
PDZD4-204ENST00000475140 MSH6P52701 1360 aa28.22■■■□□ 2.11
PDZD4-204ENST00000475140 DIP2AQ14689 1571 aa28.2■■■□□ 2.11
PDZD4-204ENST00000475140 TRPM2O94759 1503 aa28.19■■■□□ 2.1
PDZD4-204ENST00000475140 SLC4A1APQ9BWU0 796 aaKnown RBP28.19■■■□□ 2.1
PDZD4-204ENST00000475140 C14orf37Q86TY3 774 aa28.18■■■□□ 2.1
PDZD4-204ENST00000475140 MED1Q15648 1581 aaPredicted RBP28.18■■■□□ 2.1
PDZD4-204ENST00000475140 CHD2O14647 1828 aaKnown RBP28.18■■■□□ 2.1
PDZD4-204ENST00000475140 CLTCL1P53675 1640 aa28.17■■■□□ 2.1
PDZD4-204ENST00000475140 FAM135BQ49AJ0 1406 aa28.17■■■□□ 2.1
PDZD4-204ENST00000475140 PIK3R4Q99570 1358 aa28.16■■■□□ 2.1
PDZD4-204ENST00000475140 AMOTL2Q9Y2J4 779 aa28.12■■■□□ 2.09
PDZD4-204ENST00000475140 PHF23Q9BUL5 403 aaPredicted RBP28.11■■■□□ 2.09
PDZD4-204ENST00000475140 SLAIN2Q9P270 581 aa28.1■■■□□ 2.09
PDZD4-204ENST00000475140 NCOA3Q9Y6Q9 1424 aa28.09■■■□□ 2.09
PDZD4-204ENST00000475140 SETBP1Q9Y6X0 1596 aa28.08■■■□□ 2.09
PDZD4-204ENST00000475140 ROBO1Q9Y6N7 1651 aa28.08■■■□□ 2.09
PDZD4-204ENST00000475140 SOCS7O14512 581 aa28.08■■■□□ 2.09
PDZD4-204ENST00000475140 NEXMIFQ5QGS0 1516 aa28.07■■■□□ 2.08
PDZD4-204ENST00000475140 KIF1BO60333 1816 aa28.06■■■□□ 2.08
PDZD4-204ENST00000475140 PTPRUQ92729 1446 aa28.06■■■□□ 2.08
PDZD4-204ENST00000475140 FOXD1Q16676 465 aa28.05■■■□□ 2.08
PDZD4-204ENST00000475140 NRXN3Q9Y4C0 1643 aa28.05■■■□□ 2.08
PDZD4-204ENST00000475140 ATF3P18847 181 aa28.04■■■□□ 2.08
PDZD4-204ENST00000475140 C19orf44Q9H6X5 657 aa28.03■■■□□ 2.08
PDZD4-204ENST00000475140 METP08581 1390 aa28.02■■■□□ 2.08
PDZD4-204ENST00000475140 CADPS2Q86UW7 1296 aa28.02■■■□□ 2.08
PDZD4-204ENST00000475140 VGFO15240 615 aaPredicted RBP28.01■■■□□ 2.07
PDZD4-204ENST00000475140 MPHOSPH9Q99550 1183 aa27.98■■■□□ 2.07
PDZD4-204ENST00000475140 RPGRIP1LQ68CZ1 1315 aa27.97■■■□□ 2.07
PDZD4-204ENST00000475140 XRN1Q8IZH2 1706 aaKnown RBP27.96■■■□□ 2.07
PDZD4-204ENST00000475140 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.96■■■□□ 2.07
PDZD4-204ENST00000475140 CCDC144AA2RUR9 1427 aa27.95■■■□□ 2.07
PDZD4-204ENST00000475140 PHLPP1O60346 1717 aa27.92■■■□□ 2.06
PDZD4-204ENST00000475140 SETD5Q9C0A6 1442 aa27.92■■■□□ 2.06
PDZD4-204ENST00000475140 ACIN1Q9UKV3 1341 aaKnown RBP27.92■■■□□ 2.06
PDZD4-204ENST00000475140 RGL3Q3MIN7 710 aa27.89■■■□□ 2.06
PDZD4-204ENST00000475140 DCCP43146 1447 aa27.89■■■□□ 2.06
PDZD4-204ENST00000475140 JCADQ9P266 1359 aa27.86■■■□□ 2.05
PDZD4-204ENST00000475140 PPLO60437 1756 aa27.84■■■□□ 2.05
PDZD4-204ENST00000475140 BRINP3Q76B58 766 aa27.84■■■□□ 2.05
PDZD4-204ENST00000475140 ADGRL3Q9HAR2 1447 aa27.84■■■□□ 2.05
PDZD4-204ENST00000475140 RAB3GAP2Q9H2M9 1393 aa27.82■■■□□ 2.04
PDZD4-204ENST00000475140 COL16A1Q07092 1604 aaPredicted RBP27.81■■■□□ 2.04
PDZD4-204ENST00000475140 PTCH1Q13635 1447 aa27.81■■■□□ 2.04
PDZD4-204ENST00000475140 SPATA31E1Q6ZUB1 1445 aa27.81■■■□□ 2.04
PDZD4-204ENST00000475140 ADGRF5Q8IZF2 1346 aa27.8■■■□□ 2.04
PDZD4-204ENST00000475140 MST1RQ04912 1400 aa27.8■■■□□ 2.04
PDZD4-204ENST00000475140 SETD1AO15047 1707 aaKnown RBP27.79■■■□□ 2.04
PDZD4-204ENST00000475140 AHDC1Q5TGY3 1603 aaPredicted RBP27.79■■■□□ 2.04
PDZD4-204ENST00000475140 ANKRD30BQ9BXX2 1392 aa27.79■■■□□ 2.04
PDZD4-204ENST00000475140 RGS17Q9UGC6 210 aaPredicted RBP27.79■■■□□ 2.04
PDZD4-204ENST00000475140 ROBO2Q9HCK4 1378 aa27.78■■■□□ 2.04
PDZD4-204ENST00000475140 ASXL1Q8IXJ9 1541 aa27.77■■■□□ 2.04
PDZD4-204ENST00000475140 NALCNQ8IZF0 1738 aa27.76■■■□□ 2.03
PDZD4-204ENST00000475140 SPATA31A6Q5VVP1 1343 aa27.73■■■□□ 2.03
PDZD4-204ENST00000475140 MEX3CQ5U5Q3 659 aaKnown RBP27.72■■■□□ 2.03
PDZD4-204ENST00000475140 PRAG1Q86YV5 1406 aa27.72■■■□□ 2.03
PDZD4-204ENST00000475140 STK26Q9P289 416 aa27.71■■■□□ 2.03
PDZD4-204ENST00000475140 IFT172Q9UG01 1749 aa27.69■■■□□ 2.02
PDZD4-204ENST00000475140 C1orf167Q5SNV9 1468 aa27.68■■■□□ 2.02
PDZD4-204ENST00000475140 POTEAQ6S8J7 498 aa27.67■■■□□ 2.02
PDZD4-204ENST00000475140 DDX17Q92841 729 aaKnown RBP27.67■■■□□ 2.02
PDZD4-204ENST00000475140 PIK3C2GO75747 1445 aa27.67■■■□□ 2.02
PDZD4-204ENST00000475140 TMEM132EQ6IEE7 984 aa27.66■■■□□ 2.02
PDZD4-204ENST00000475140 SHPRHQ149N8 1683 aa27.65■■■□□ 2.02
PDZD4-204ENST00000475140 NUTM2BA6NNL0 878 aaPredicted RBP27.65■■■□□ 2.02
PDZD4-204ENST00000475140 NUTM2EB1AL46 878 aaPredicted RBP27.65■■■□□ 2.02
PDZD4-204ENST00000475140 NUTM2AQ8IVF1 878 aaPredicted RBP27.65■■■□□ 2.02
PDZD4-204ENST00000475140 LRRC59Q96AG4 307 aaKnown RBP27.65■■■□□ 2.02
PDZD4-204ENST00000475140 LRP6O75581 1613 aa27.65■■■□□ 2.02
PDZD4-204ENST00000475140 LRPPRCP42704 1394 aaKnown RBP27.64■■■□□ 2.02
PDZD4-204ENST00000475140 NHSL1Q5SYE7 1610 aa27.64■■■□□ 2.02
PDZD4-204ENST00000475140 ORAI2Q96SN7 254 aa27.62■■■□□ 2.01
PDZD4-204ENST00000475140 WAPLQ7Z5K2 1190 aa27.61■■■□□ 2.01
PDZD4-204ENST00000475140 ABCC11Q96J66 1382 aa27.6■■■□□ 2.01
PDZD4-204ENST00000475140 TECPR2O15040 1411 aa27.59■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms