RNA–Protein interactions for RNA: ENST00000474887.5

DNMT3A-211, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 847 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-211ENST00000474887 TBX22Q9Y458 520 aa21.22■□□□□ 0.99
DNMT3A-211ENST00000474887 RIMS2Q9UQ26 1411 aa21.21■□□□□ 0.99
DNMT3A-211ENST00000474887 HSPA1LP34931 641 aa21.21■□□□□ 0.99
DNMT3A-211ENST00000474887 STRCP1A6NGW2 1772 aa21.2■□□□□ 0.98
DNMT3A-211ENST00000474887 TMEM131LA2VDJ0 1609 aa21.19■□□□□ 0.98
DNMT3A-211ENST00000474887 CHGAP10645 457 aaKnown RBP21.19■□□□□ 0.98
DNMT3A-211ENST00000474887 E9PCH4 1651 aa21.18■□□□□ 0.98
DNMT3A-211ENST00000474887 PROSER2Q86WR7 435 aaPredicted RBP21.18■□□□□ 0.98
DNMT3A-211ENST00000474887 NAIPQ13075 1403 aa21.17■□□□□ 0.98
DNMT3A-211ENST00000474887 NKTRP30414 1462 aaKnown RBP21.16■□□□□ 0.98
DNMT3A-211ENST00000474887 TMEM94Q12767 1356 aa21.15■□□□□ 0.98
DNMT3A-211ENST00000474887 PIK3R4Q99570 1358 aa21.15■□□□□ 0.98
DNMT3A-211ENST00000474887 ACIN1Q9UKV3 1341 aaKnown RBP21.14■□□□□ 0.97
DNMT3A-211ENST00000474887 HFM1A2PYH4 1435 aa21.13■□□□□ 0.97
DNMT3A-211ENST00000474887 NCOA3Q9Y6Q9 1424 aa21.13■□□□□ 0.97
DNMT3A-211ENST00000474887 ALKQ9UM73 1620 aa21.13■□□□□ 0.97
DNMT3A-211ENST00000474887 FAM135BQ49AJ0 1406 aa21.12■□□□□ 0.97
DNMT3A-211ENST00000474887 NWD1Q149M9 1564 aa21.1■□□□□ 0.97
DNMT3A-211ENST00000474887 DIP2AQ14689 1571 aa21.08■□□□□ 0.97
DNMT3A-211ENST00000474887 MSH6P52701 1360 aa21.08■□□□□ 0.96
DNMT3A-211ENST00000474887 TRIM52Q96A61 297 aa21.07■□□□□ 0.96
DNMT3A-211ENST00000474887 ADAMTS13Q76LX8 1427 aa21.06■□□□□ 0.96
DNMT3A-211ENST00000474887 MYO5BQ9ULV0 1848 aa21.06■□□□□ 0.96
DNMT3A-211ENST00000474887 ZNF326Q5BKZ1 582 aaKnown RBP21.05■□□□□ 0.96
DNMT3A-211ENST00000474887 ILDR2Q71H61 639 aa21.04■□□□□ 0.96
DNMT3A-211ENST00000474887 SLC4A1APQ9BWU0 796 aaKnown RBP21.04■□□□□ 0.96
DNMT3A-211ENST00000474887 SOCS7O14512 581 aa21.03■□□□□ 0.96
DNMT3A-211ENST00000474887 SLAIN2Q9P270 581 aa21.03■□□□□ 0.96
DNMT3A-211ENST00000474887 XIRP1Q702N8 1843 aaKnown RBP21.03■□□□□ 0.96
DNMT3A-211ENST00000474887 SPHKAPQ2M3C7 1700 aa21.03■□□□□ 0.96
DNMT3A-211ENST00000474887 CHD2O14647 1828 aaKnown RBP21.02■□□□□ 0.96
DNMT3A-211ENST00000474887 NUTM2DQ5VT03 806 aaPredicted RBP21.02■□□□□ 0.96
DNMT3A-211ENST00000474887 TRPM2O94759 1503 aa21.02■□□□□ 0.96
DNMT3A-211ENST00000474887 RPGRIP1LQ68CZ1 1315 aa21.02■□□□□ 0.95
DNMT3A-211ENST00000474887 C19orf44Q9H6X5 657 aa21.01■□□□□ 0.95
DNMT3A-211ENST00000474887 VGFO15240 615 aaPredicted RBP21■□□□□ 0.95
DNMT3A-211ENST00000474887 CADPS2Q86UW7 1296 aa21■□□□□ 0.95
DNMT3A-211ENST00000474887 AMOTL2Q9Y2J4 779 aa21■□□□□ 0.95
DNMT3A-211ENST00000474887 C14orf37Q86TY3 774 aa20.98■□□□□ 0.95
DNMT3A-211ENST00000474887 RBM33Q96EV2 1170 aaKnown RBP20.98■□□□□ 0.95
DNMT3A-211ENST00000474887 SENP3Q9H4L4 574 aaPredicted RBP20.97■□□□□ 0.95
DNMT3A-211ENST00000474887 SETBP1Q9Y6X0 1596 aa20.97■□□□□ 0.95
DNMT3A-211ENST00000474887 ATF3P18847 181 aa20.96■□□□□ 0.95
DNMT3A-211ENST00000474887 MED1Q15648 1581 aaPredicted RBP20.95■□□□□ 0.94
DNMT3A-211ENST00000474887 PHF23Q9BUL5 403 aaPredicted RBP20.94■□□□□ 0.94
DNMT3A-211ENST00000474887 CLTCL1P53675 1640 aa20.93■□□□□ 0.94
DNMT3A-211ENST00000474887 KIF1BO60333 1816 aa20.9■□□□□ 0.94
DNMT3A-211ENST00000474887 DCCP43146 1447 aa20.9■□□□□ 0.94
DNMT3A-211ENST00000474887 PTPRUQ92729 1446 aa20.9■□□□□ 0.94
DNMT3A-211ENST00000474887 MPHOSPH9Q99550 1183 aa20.9■□□□□ 0.94
DNMT3A-211ENST00000474887 NEXMIFQ5QGS0 1516 aa20.89■□□□□ 0.94
DNMT3A-211ENST00000474887 METP08581 1390 aa20.88■□□□□ 0.93
DNMT3A-211ENST00000474887 ROBO1Q9Y6N7 1651 aa20.88■□□□□ 0.93
DNMT3A-211ENST00000474887 NRXN3Q9Y4C0 1643 aa20.86■□□□□ 0.93
DNMT3A-211ENST00000474887 CCDC144AA2RUR9 1427 aa20.86■□□□□ 0.93
DNMT3A-211ENST00000474887 JCADQ9P266 1359 aa20.85■□□□□ 0.93
DNMT3A-211ENST00000474887 SETD5Q9C0A6 1442 aa20.84■□□□□ 0.93
DNMT3A-211ENST00000474887 XRN1Q8IZH2 1706 aaKnown RBP20.83■□□□□ 0.92
DNMT3A-211ENST00000474887 ANKRD30BQ9BXX2 1392 aa20.83■□□□□ 0.92
DNMT3A-211ENST00000474887 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.81■□□□□ 0.92
DNMT3A-211ENST00000474887 PRAG1Q86YV5 1406 aa20.81■□□□□ 0.92
DNMT3A-211ENST00000474887 PTCH1Q13635 1447 aa20.79■□□□□ 0.92
DNMT3A-211ENST00000474887 HRCP23327 699 aa20.79■□□□□ 0.92
DNMT3A-211ENST00000474887 FOXD1Q16676 465 aa20.79■□□□□ 0.92
DNMT3A-211ENST00000474887 SPATA31A6Q5VVP1 1343 aa20.78■□□□□ 0.92
DNMT3A-211ENST00000474887 ADGRL3Q9HAR2 1447 aa20.78■□□□□ 0.92
DNMT3A-211ENST00000474887 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
DNMT3A-211ENST00000474887 SPATA31E1Q6ZUB1 1445 aa20.78■□□□□ 0.92
DNMT3A-211ENST00000474887 PHLPP1O60346 1717 aa20.75■□□□□ 0.91
DNMT3A-211ENST00000474887 AHDC1Q5TGY3 1603 aaPredicted RBP20.75■□□□□ 0.91
DNMT3A-211ENST00000474887 RGL3Q3MIN7 710 aa20.75■□□□□ 0.91
DNMT3A-211ENST00000474887 MST1RQ04912 1400 aa20.74■□□□□ 0.91
DNMT3A-211ENST00000474887 RGS17Q9UGC6 210 aaPredicted RBP20.74■□□□□ 0.91
DNMT3A-211ENST00000474887 PPLO60437 1756 aa20.72■□□□□ 0.91
DNMT3A-211ENST00000474887 LRRC59Q96AG4 307 aaKnown RBP20.72■□□□□ 0.91
DNMT3A-211ENST00000474887 COL16A1Q07092 1604 aaPredicted RBP20.71■□□□□ 0.91
DNMT3A-211ENST00000474887 ADGRF5Q8IZF2 1346 aa20.71■□□□□ 0.91
DNMT3A-211ENST00000474887 RAB3GAP2Q9H2M9 1393 aa20.71■□□□□ 0.91
DNMT3A-211ENST00000474887 ROBO2Q9HCK4 1378 aa20.71■□□□□ 0.91
DNMT3A-211ENST00000474887 SIRT1Q96EB6 747 aa20.69■□□□□ 0.9
DNMT3A-211ENST00000474887 STAC3Q96MF2 364 aa20.69■□□□□ 0.9
DNMT3A-211ENST00000474887 ABCC11Q96J66 1382 aa20.68■□□□□ 0.9
DNMT3A-211ENST00000474887 ASXL1Q8IXJ9 1541 aa20.68■□□□□ 0.9
DNMT3A-211ENST00000474887 SETD1AO15047 1707 aaKnown RBP20.67■□□□□ 0.9
DNMT3A-211ENST00000474887 LRPPRCP42704 1394 aaKnown RBP20.67■□□□□ 0.9
DNMT3A-211ENST00000474887 TECPR2O15040 1411 aa20.66■□□□□ 0.9
DNMT3A-211ENST00000474887 C1orf167Q5SNV9 1468 aa20.66■□□□□ 0.9
DNMT3A-211ENST00000474887 C14orf93Q9H972 538 aaKnown RBP20.65■□□□□ 0.9
DNMT3A-211ENST00000474887 PIK3C2GO75747 1445 aa20.64■□□□□ 0.89
DNMT3A-211ENST00000474887 MEX3CQ5U5Q3 659 aaKnown RBP20.64■□□□□ 0.89
DNMT3A-211ENST00000474887 ZNF772Q68DY9 489 aaPredicted RBP20.64■□□□□ 0.89
DNMT3A-211ENST00000474887 POTEAQ6S8J7 498 aa20.63■□□□□ 0.89
DNMT3A-211ENST00000474887 SHPRHQ149N8 1683 aa20.62■□□□□ 0.89
DNMT3A-211ENST00000474887 NALCNQ8IZF0 1738 aa20.61■□□□□ 0.89
DNMT3A-211ENST00000474887 DHX57Q6P158 1386 aaKnown RBP20.6■□□□□ 0.89
DNMT3A-211ENST00000474887 STK26Q9P289 416 aa20.6■□□□□ 0.89
DNMT3A-211ENST00000474887 MYOM2P54296 1465 aa20.6■□□□□ 0.89
DNMT3A-211ENST00000474887 SOS2Q07890 1332 aaPredicted RBP20.59■□□□□ 0.89
DNMT3A-211ENST00000474887 IFT172Q9UG01 1749 aa20.59■□□□□ 0.89
DNMT3A-211ENST00000474887 NRXN1Q9ULB1 1477 aa20.59■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms